Molothrus ater (brown-headed cowbird): 118692764
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Entry
118692764 CDS
T11569
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate00260
Glycine, serine and threonine metabolism
mate00630
Glyoxylate and dicarboxylate metabolism
mate00670
One carbon pool by folate
mate01100
Metabolic pathways
mate01200
Carbon metabolism
mate01230
Biosynthesis of amino acids
mate01240
Biosynthesis of cofactors
mate04981
Folate transport and metabolism
Module
mate_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
118692764 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
118692764 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
118692764 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
118692764 (SHMT1)
Enzymes [BR:
mate01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
118692764 (SHMT1)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
118692764
NCBI-ProteinID:
XP_036248702
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Position
16:2252400..2257965
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AA seq
482 aa
AA seq
DB search
MASSAQGLPSAELWASHNKMVMEPLDTNDPEVHSIIKKEKQRQRLGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALQAYQLDPQKWGVNVQPYSGS
PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSLFFESMPYKVNPKTGYI
DYDKLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADDNGAFLMADMAHISGLVAAGVV
PSPFEHCDIVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETLYNLESLINQAVFPGLQ
GGPHNHAIAGIAVALHQAMTPEFKAYQQQVVANCKALSSALMEMGYDIVTGGSDNHLILV
DLRSKGTDGGRAERVLELCSIACNKNTCPGDVSALRPSGLRFGTPALTSRGFRQDDFRKV
AQYIHKGIELALRVQKDMSPKATLKEFKDKLEDPKYRGELKALKEEVEAFAATFPLPGLP
VL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcagcacaaggcctccccagcgccgagctctgggcctcccataacaagatg
gtgatggagccgctggacaccaacgaccccgaggtgcacagcatcatcaagaaggagaag
cagcggcagaggttggggctggagttaattgcatcggagaactttgcaagccgagcagtc
ctggaggccctgggatcctgcatgaacaacaaatactctgagggttacccgggacagagg
tactacggtgggacggagtttgtggacgagctggagaggctgtgccagaagcgagccctg
caggcttaccagctcgacccccagaagtggggagtcaatgtccagccctactcagggtca
cctgcaaactttgcggtgtacacggccctggtggagccccacggcaggatcatggggctg
gatctgcctgacggtggccacctcacccacggcttcatgacagacaagaagaagatctct
gccacctctctcttctttgagtccatgccctacaaggtcaaccccaagactggttacatc
gactatgacaagctggaggagaacgcccggctcttccaccccaagctgatcatagcaggt
gtcagctgctactcgcggaacctggactacgcccgcatgcggaagatcgccgatgacaac
ggggccttcctgatggccgacatggcgcacatcagcgggctggtggccgccggcgtggtg
ccctcgcccttcgagcactgcgacatcgtctccaccaccacccacaagaccctgcggggc
tgcagggccggcatgatcttctaccgcaaaggcacccgcagcgtggaccccaagacaggc
aaggagaccctctacaacctggagagcctcatcaaccaggcagtgttcccggggctgcag
ggaggcccacacaaccacgccattgcagggattgctgtggcactgcatcaggccatgaca
cccgagttcaaggcttaccagcagcaggtggtggccaactgcaaggcactctcatcagca
ctgatggagatgggctacgacattgtcacagggggctctgacaatcacctgatcctggtg
gacctgcgcagcaaaggcacagacggcggccgggccgagcgggtgctggagctctgctcc
atcgcctgcaacaagaacacgtgccctggtgatgtcagtgccctgcggcccagcggcctc
cgcttcgggaccccggccctgacctcgcgcggcttccggcaggacgatttccgcaaggtg
gcccagtacatccacaaagggattgagctggccctgcgtgtgcagaaggacatgagcccc
aaggccacactgaaggaattcaaggacaaattggaagacccgaaataccgtggggagctg
aaggcactgaaggaagaggtggaagcctttgcagccacattcccactgccggggctgcct
gtcctgtaa
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