Molothrus ater (brown-headed cowbird): 118692851
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Entry
118692851 CDS
T11569
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mate03041
]
118692851 (TFIP11)
Spliceosome [BR:
mate03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
118692851 (TFIP11)
Other components
Complex C specific factors
118692851 (TFIP11)
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
118692851
NCBI-ProteinID:
XP_036248829
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Position
18:complement(4930822..4940630)
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AA seq
827 aa
AA seq
DB search
MSMSHLYGTDGDDGVEMESFEVSDWDLQNEFNPHRQRHRQTKEEATYGVWAERDSDEERP
SFGGKRSRDYSAPVSFVSAGLRKAAAEELSNEDSDDDEKPVKQEEIPKEFVPKKLKTGGN
FKPSQKGFVGGSKSFVDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTTQSLQDFPVVDSEEETEEEFQKELSQWRKDPNGGKKKPKYSYKTVE
ELKAKGRISKQLAAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKDS
KPQGFALPELEHNLQLLIDITEQEIIQSDRQLQYERDMVVNLSHEIQKMAEVLSHEEKAI
SNLSKVLDMVEECERRMQPGCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKEYFKNWDPLKDCTYGTEIIAKWKSLLENDQLLSHSGQDLSTDAFHRLMWEIWMPYVR
NIVARWQPRNCGSMVDFLDSWVNVVPVWILDNILDQLIFPKLQKEVESWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGAAAGSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgcacctgtacggcacggacggagacgatggcgtggagatggagagcttc
gaggtgtcggactgggacctgcagaacgaattcaacccgcaccgtcagcgacaccgccag
accaaggaggaggcgacctacggcgtgtgggccgagcgcgactcggacgaggagcggccc
agcttcggagggaagcgctccagggattactcggcccccgtgagctttgtgagcgctggg
ctgaggaaggcggcggccgaggagctctcgaatgaggactcggatgatgatgagaagcct
gtgaagcaggaggagattcccaaggagtttgtgcccaagaagttgaagacaggtggaaat
ttcaagcccagccagaaaggcttcgtaggaggctccaagtcctttgtggattttggcagc
tgggagagacacactaaaggcattggccagaagcttctccagaagatgggatatgtccct
ggaaggggtctggggaagaatgctcaaggaatcatcaaccccatcgaggccaagcagagg
aaaggcaaaggtgctgtgggcgcttatggctccgagaggaccacgcagtccttgcaggac
ttccctgtggtggactcagaagaggaaactgaggaggagtttcagaaggagctcagccag
tggcggaaggacccgaacggaggcaagaaaaagcccaagtacagctacaaaacagtggaa
gagctgaaagccaaaggcaggatcagcaagcagcttgcagcccctcagaaggagctgtcc
caggtcaaggtgatcgacatgacgggccgggagcagaaggtttattacagctacagccag
atcagccacaagcacaacatcccagatgacagcccccagcaacccctgggcaaggactcc
aagccccagggctttgccctgcccgagctggagcacaacctgcagctgctcatcgacatc
acggagcaggagatcatccagagcgaccggcagctgcagtacgagagggacatggtggtc
aacctcagccacgagatccagaagatggctgaggtgctgtcccacgaggagaaggccatc
agcaacctcagcaaggtgctggacatggtggaagagtgtgagaggcggatgcagccgggc
tgtgagaaccctctgaccctggatgagtgtgcaaagatctttgagaccctgcaggacaag
tactacgaggagtacaggatgtcagacagggtggacctggcagtggccatagtttatccc
ctcatgaaggaatacttcaagaactgggatcccctcaaggactgtacatacggcacagag
atcatagccaagtggaagagccttctggaaaacgatcagctgttatcccacagtgggcag
gacctgtcaacagatgcttttcacagactgatgtgggagatctggatgccatatgtcagg
aacatcgtggcgcggtggcagccaaggaactgtggatccatggtggatttcttagatagc
tgggtgaacgttgtccctgtgtggatactggataacattctggatcagctcatcttcccc
aagctgcagaaggaggtggagagctggaaccctctgacggacacggtgcccatccactcg
tggatccacccctggctgccgctgatgcaggcgcgcctggagccgctgtactcgcccatc
cgcaacaagctggccaacgccctgcagaagtggcaccccagcgactcctctgccaagctc
atccttcagccctggaaggatgtgttcactcctggctcctgggaggctttcatggtcaag
aacatcgtgcctaaactcggaatgtgcctgaatgagctcatcatcaaccctcaccagcag
cacatggatgctttttattgggtgattgactgggaggggatgatttctgtctccagcctt
gttgggctgctggagaaacacttcttcccaaaatggctgcaggtgctctgctcttggctc
agtaacagccccaactacgaagagatcaccaagtggtacctgggctggaagtccatgttc
tcagaccaggtgctagcacatccctccatcaaagacaagttcaacgaagcccttgacatc
atgaacagggctgtgtcctccagcgtgggtgggtacatgcagccgggtgcccgggagaac
atcgcgtacctgacgcacacggagcggcgcaaggacttccagtacgaggccatgcaggag
cggcgcgaggccgagaacatggcccagcgcggcatcggcgccgccgccggctccgtgccc
atgaacttcaaggacctcatccagaccaaggccgaggagcacaacatcgtcttcatgcct
gtcatcgggaagaggcacgagggcaagcagctctacaccttcggcaggatcgtcatctac
atcgacaggggcgtggtgttcgtgcaaggggagaagacctgggtgcccacctcactgcag
agcctcatcgacatggccaagtga
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