Molothrus ater (brown-headed cowbird): 118692980
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Entry
118692980 CDS
T11569
Symbol
AP1B1
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X2
KO
K12392
AP-1 complex subunit beta-1
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
118692980 (AP1B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mate04131
]
118692980 (AP1B1)
Membrane trafficking [BR:
mate04131
]
Endosome - Golgi transport
Others
AP-1 complex
118692980 (AP1B1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
Cnd3
PDS5
HEAT_GCN1
Arm
RTP1_C1
HEAT_EZ
XMAP215_CLASP_TOG
NELF-A_N
HEAT_spiro
Alpha_adaptin_C
Arm_2
API5
FANCI_S3
Transposase_22
Motif
Other DBs
NCBI-GeneID:
118692980
NCBI-ProteinID:
XP_036249128
LinkDB
All DBs
Position
18:complement(12588782..12617056)
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AA seq
941 aa
AA seq
DB search
MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA
VAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLANYMPKDDREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPELQY
VALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRK
YPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVAAKEV
VLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPSAFVEGSRGVVHKSLPPRTDSG
ESPESPDTAPSGGPAGDQPSVIPTQGDLLGDLLNLDLGPPVSGPPMATSAVQMGAVDLLG
GGLDRLMGGGGGSFTAAPSTTAPTNMGAPLGSGLGDLFDLTGGVGTLSGSYVAPKTVWLP
AMKAKGLEISGTFSRQVGSISMDLVLTNKALQVMSDFAIQFNRNSFGLAPAAPLQVHAPL
APNQSVEISLPLNTVGSVMKMEPLNNLQVAVKNNIDVFYFSTLYPLHILFVEDGKMERQT
FLATWKDIPNENETQFQIKDCSLNADAVSSKLQGSNIFTIAKRNVEGQDMLYQSLKLTNG
IWVLAELRIQPSNPSFTLSLKCRAPEVSQYIYQAYETILKN
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgacagactccaagtacttcaccaccaccaagaaaggggagatatttgagctgaaggct
gagctgaacagtgacaagaaggagaagaagaaggaggctgtgaagaaggtgattgcctcc
atgactgtgggcaaggacgtcagcgctctcttcccggatgtggtgaactgcatgcagaca
gacaacctggagctgaagaagttggtctacctctacctgatgaactatgccaagagccag
ccagacatggccatcatggctgtgaacacctttgtgaaggactgtgaggacccgaacccg
ctgatccgggcgctggccgtgcgcaccatgggctgcatccgcgtggacaagatcaccgag
tacctgtgcgagcccctgcgcaagtgcctcaaggacgaggacccctacgtgcgcaagacg
gccgccgtctgcgtggccaagctgcacgacatcaacgcccagctggtggaggaccagggc
ttcctggacaccctcaaggatctcatctcagactccaaccccatggtggtggccaacgcg
gtggcagcgctgtcggagatcgcggagtctcatcccagcagcaacctcctggacctcaac
ccccagtccatcaacaagctgctcacagccctcaacgagtgcactgagtggggccagatc
ttcatcctggactgcctggcaaactacatgcccaaggatgaccgggaggcacagagcatc
tgcgagcgggtgacaccgcggctgtcccacgccaactctgccgtggtgctgtcagctgtc
aaggtgctgatgaagttcatggagatgctgtccaaggacctggattattatggcactctc
ctgaagaagctggccccaccactggtcactctgctgtctgcagagcccgagctgcagtac
gtggccctccgcaacatcaacctcatcgtgcagaagaggcccgagatcctgaagcacgag
atgaaagtgttctttgtcaagtacaacgaccccatctacgtcaaactggagaaactggac
atcatgatccgcctggcctcccaggccaacatagctcaggtgctggcagagctgaaggaa
tacgccacggaggtggatgtggattttgtcaggaaggcggtgagagccatcggccgctgt
gccatcaaggtggagcaatcggccgagcgctgtgtcagcaccctgctggacctcatccag
accaaggtgaactacgtggtgcaggaggccatcgtggtcatcaaggacatcttccgcaag
taccccaacaagtacgagagtgtgattgccacgctctgtgagaacctggattccctggac
gagcctgaggccagggctgccatgatctggatcgtgggggaatacgccgagcgcatcgac
aacgccgacgagctgctggagagcttcctggagggcttccatgatgagagcacccaggtc
cagctgcagctgctgacagccatcgtgaagctgttcctgaagaagcccacagagacacag
gagttggtgcagcaggtgctgagcttggccacacaggactcggacaaccccgacctgcgg
gatcgtgggtacatctactggcgcctgctctccacggaccccgtggccgccaaggaggtg
gtgctggccgagaagccgctgatctcggaggagacggatctgatcgagcccacgctgctg
gacgagctcatctgctacatcgggaccctggcctcggtgtaccacaaaccccccagcgcc
ttcgtggagggcagcaggggcgtcgtgcacaagagtttgcccccgcgcacggactcgggt
gagagtcctgagagcccggacacagccccgtcgggggggccagcaggagatcagccctct
gtcatccccacccagggggacctgctgggggacctgctcaacctggacctgggcccccca
gtgagcgggccccccatggccacctccgccgtgcagatgggcgccgtggacctcctcggg
ggtggcttggacaggctgatgggtggcggcggtggcagcttcacagcagctcccagcacc
acggcacccacaaacatgggggcacccctcggcagcggcctgggcgacctcttcgacctc
accggtggggtggggaccctctcaggatcctacgtggcccccaaaacggtgtggctccct
gccatgaaagccaaggggctggagatctctggcaccttcagccgccaggtgggctccatc
tccatggacctcgtgctgaccaacaaagccctgcaggtcatgtctgactttgccatccag
ttcaaccgcaacagcttcggcctggccccagcagctcctctgcaggtgcatgcacctctg
gctcccaaccagtccgtggagatctccctgcccctcaacaccgtgggctccgtcatgaag
atggagcccctcaacaacctccaggtggcagtgaagaacaacattgacgtcttctacttc
agcaccctgtaccccctgcacatcctgttcgtggaggatggcaagatggagaggcagaca
ttcctggccacctggaaggacattcccaacgagaacgagacccagttccagatcaaagat
tgttccctcaacgcagatgctgtgagcagcaaactccaaggcagcaacatcttcaccatt
gccaagaggaacgtggagggccaggacatgctctaccagtccctgaagctcaccaacggc
atctgggtgctggcagagctccggatccagcccagcaaccccagcttcacgttatccctg
aaatgccgagcaccagaggtgtcccagtacatctaccaagcctatgagaccatcctgaag
aactga
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