Molothrus ater (brown-headed cowbird): 118693003
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Entry
118693003 CDS
T11569
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03030
DNA replication
mate03410
Base excision repair
mate03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118693003 (POLE)
03410 Base excision repair
118693003 (POLE)
03420 Nucleotide excision repair
118693003 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mate03032
]
118693003 (POLE)
03400 DNA repair and recombination proteins [BR:
mate03400
]
118693003 (POLE)
Enzymes [BR:
mate01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
118693003 (POLE)
DNA replication proteins [BR:
mate03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
118693003 (POLE)
DNA repair and recombination proteins [BR:
mate03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
118693003 (POLE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
118693003
NCBI-ProteinID:
XP_036249179
LinkDB
All DBs
Position
18:14244878..14278587
Genome browser
AA seq
2296 aa
AA seq
DB search
MGLRDGAETEPARRGRRPGGPRDLADGAGSGRDDASALSALKRLERAQRTDRLDALFGFE
RPAEPGERTGWLINMHPTEVLDEDRQSVSAVDYYFIQEDGSRFKVALPYKPYFYIATQKG
CEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLLKVRKEIS
PAVRKNRERDQASDVYTTMLSSALSGGSLSTDDEGASKKIANQMDNIMDMREYDVPYHVR
LSIDLKIHVAHWYNVRYQGNTYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDADTD
QIMMISYMIDGQGYLITNREIVSENIEDFEFTPKPEYEGPFCVFNEPDEAHLIRRWFEHV
QETKPTIIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEYKASQCIHMDCLRWV
KRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMAMEEPQTLATYSVSDAVATYYMYM
KYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDG
HVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLVQHVEKTLQHAIEEEEGLPLD
QVTNFQEVCDEIKAKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATC
AACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDGPPRAFHELS
QEEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGL
HKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEM
AGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNIKKPKVTIS
YPGAMLNILVKEGFTNDQYQELQDPASLTYITRSENSIFFEVDGPYLAMILPASKEEGKK
LKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVAD
YWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKD
AGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAILDWD
YYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFVSKG
KKQILANPPVEGTPSSQVSDIEDLGAVKIPLPLVPIANKRKRIPAAEESQELSQDLELSQ
SWREILGPPPSLGTTKEERLVWLRFHQKKWELQARQRQERRKRRRLEDGEVVVGRGVVRD
ALSKGLSSYLRRTARSILDLPWQVVQIAETSQPGLFRLWAVIGSDLHCIKLSIPRVFYVN
QRVPKPEEGTAYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYET
QVPLLFRALIHLGCVCMVSRQLVRHLAGREAETFNIEHLEMRSLAQFTYLEPGSIRHIYL
YHSSQGSKAVLGLFIPSQRKAAVFVLDKVRSNQMPNLSTLFSVERAALLEKVGKELLPPD
KHTFEVRAETDPKAIYRGVQRLLSGYKDERRGPTLVAVQSNWDLKQLASGIPIMEEFPLV
PIRLVDDISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGS
DLFFSRHLHRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINHPGCYSTVCLEL
DIQSLAVNTVLQSHHVNDMEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETALCS
NTFRILKSMVVSWVKEITQYHNAYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLF
LQLVAEFKRLGSSVVYANFNRIILCTKKRHIEDAISYMEYIINSIHSKEIFHSLTISFSR
CWEFLLWMDPANYGGIKGKVDSRIHYGEKDTRKTLEEESEEEEEEEEEVAREEEEEKGEP
DVEELLENNWNIAQFLPQAGSCQSYFLMIISAYIVAVYHSMKEELRRNTPGSTPIKRRST
SQVSQEALGELRAMPGMITFSQDYVANELTQSFFTITQKIQKKMAGSQNATEPSDMFPVL
PGSYLPLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEAAQFQDPCRS
YMLPEVICRNCNFCRDLDLCKDPALSQDRSVLPGWLCPSCHVQYDTDAIEMALVEALQKK
LMAFVLQDLVCRKCHGVKETHMPVYCSCAGDFALTISSQVFMDHVSVFQNIARHYGMAYL
LETIEWLLHTNLQLQQ
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcgggacggcgccgagaccgagccggcgcggcgggggcggcggccaggcggg
ccccgggacctggcggacggcgccgggtccggccgtgacgatgcttccgcgctgtcggca
ctcaagcgcctggagcgggcacagcgcacggaccggctggacgcgctgttcggcttcgag
cggcccgcagagcccggtgagcggacaggatggctcatcaacatgcacccgacggaggtg
ctggatgaggaccggcagtcagtgagcgcagtggactactacttcatccaggaggatggg
agccgcttcaaggtggccctaccctacaagccctacttctacattgctactcagaagggc
tgtgagcgggaagtgtcctccttcctctccaagaagttccaagggaagattgcaaagctg
gaaactgtccccaaagaggacttggacttgccaaaccacttggtaggcctgaagaggaac
tacatcaagctgtccttcaacacggtggaggacttgttgaaggtgcggaaggaaatctct
cctgccgtgaggaaaaacagggagcgggaccaggcgagtgatgtctacacgaccatgctg
tcgagtgcactgagtgggggcagtctaagcacagatgacgaaggagcctcaaaaaaaatt
gccaaccagatggacaacatcatggatatgcgggagtatgatgtaccttaccacgttcgc
ctttccattgatctgaagatccatgtggctcactggtacaacgtgcgatatcagggcaac
acctacccacccgaaatcacccgccgagatgaccttgtggagaggccggatcctgttgtt
cttgcctttgatattgaaacaaccaaactccctttgaagtttcctgatgcagacacagac
cagatcatgatgatctcctacatgattgatgggcagggctacctgatcacaaacagggag
attgtctcagagaacattgaagactttgagtttactcccaagccagagtatgagggtcca
ttttgtgtctttaacgaaccagatgaggctcatttaatccggagatggtttgaacatgtc
caggagaccaaacccaccatcattgtcacatacaacggagacttctttgactggcccttt
gtggaagcaagagcagcagctcatggaattaatatgtatcaggaaattgggtttcagaag
gacagccagggagagtacaaagcatcccagtgcatccacatggactgtctgaggtgggtg
aagagagacagttacctcccagtgggaagtcacaacctgaaagcagcagctaaagcaaaa
ctgggttacgatccagtggagctggaccctgaggagatgtgccggatggccatggaggag
cctcagaccctggccacctactcagtgtccgatgccgttgctacttactacatgtatatg
aagtacgtgcatcccttcattttcgccttgtgtaccatcattcccatggagcctgatgag
gtgttaagaaaaggatctgggacactatgcgaggcactgctgatggttcaggcatatcat
gccaacatcatcttccccaacaagcaagagcaggaattcaacaagcttacagaagatgga
catgtgttggactcagagacctatgtgggaggccatgtggaagcactggaatctggggtc
ttccgcagtgacattccctgccgcttcaaaatgaatcctgctgccttcgacttcctggtg
cagcatgtggagaagaccttgcagcacgccattgaggaagaggagggtcttcctttggat
caggtcactaacttccaggaggtttgtgatgaaatcaaggccaagctgaattccctgaag
gatgttcccaacagaattgagtgtcctcttatctatcatctggatgtgggggccatgtac
cccaacatcattctgaccaacaggttgcagccctctgccatggtggatgaggccacatgt
gctgcctgtgacttcaacaagccaggtgccaactgtcagcgccggatgacgtggcaatgg
agaggagagttcatgcctgccagccgcagtgagtaccaccgcatccagcagcagctggag
tcggagaagttccctcccttgttccctgatggaccaccccgtgccttccatgagctttcc
caggaagaacaagccaaatatgagaaaaagcgcctagcagattactgccgcaaggcgtac
aagaagatccatgtcaccaaggtggaggagcgagtcaccaccatctgccaacgagaaaac
tctttctacgtggacacggtgcgagcattccgggaccgccgatatgagttcaaggggctg
cacaaggtgtggaagaagaagctgtctgcagcagtggagaccggagatgcctctgaagtg
aaacgctgcaagaacatggagattctctatgactcccttcagctggcccacaagtgcatc
ctcaactccttctatggatatgtcatgcggaaaggagctcgctggtactccatggaaatg
gctggcattgtctgcttcacaggggcaaatatcatcacccaggccagagagctgatcgag
cagattgggagacctctagaactggataccgatgggatttggtgtgtccttcccaacagt
ttcccagagaactttgtcatcaagtcaaccaatatcaagaagccaaaagtaaccatctct
tacccaggtgccatgctgaacatcctcgtgaaagaaggcttcacaaatgaccagtaccag
gagctgcaggatccagcctcactcacctacatcacgcgctcagagaacagcatctttttt
gaagtggatggtccatacctggctatgatccttccagcctccaaagaggagggcaagaag
ctgaaaaaaaggtatgccgtgttcaacgaggatgggtccctggctgagctgaaggggttt
gaggtgaaacgccggggagaactgcagctggtgaagatattccagtcatctgtgttcgaa
gcctttctgaaagggagcaccctggaggaggtctatgcttccgtggccaaggtggccgat
tactggctggatgtgctttacagcaaggctgccaacatgcctgattcagagctgtttgag
ctcatctcagagaaccggtccatgtcacgcaaactggaggactacggggagcagaagtcc
acctccatcagcactgccaagcgcctggcagagtttttgggggaccagatggtgaaggat
gcaggactgagctgccgtttcatcatttccaagaaaccagaagggtctcccgtcaccgag
agggccatcccccttgccatcttccaagctgagcccagtgtgcgcaagcactacctccgg
aaatggctgaagagcccctcgctgcaggacttcaacatccgtgcgatcctggactgggac
tactacattgagaggctgggcagcaccatccagaaaatcatcaccattcctgcagccctg
cagcaggtaaagaacccggtgccacgggtccgacacccagactggcttcacaagaagctc
ctggagaagaatgatgtgtacaaacagaaaaaaatcaatgagctttttgtttcaaaaggc
aagaaacagattcttgccaacccgcctgtggaggggacacccagctcacaggtcagtgac
atagaggacttaggggctgtcaagatccctctgccactggttcccattgcaaataagcgg
aagcgcatccctgcagcagaggaaagccaagagctgtcccaggacctggagctgtcccag
tcctggcgagagatcctgggcccacctccgtcccttggcaccaccaaggaggagcgtctg
gtctggctgcgcttccaccagaagaagtgggagctgcaggctcggcagcggcaggagcgg
aggaagaggcggcggctggaggatggtgaggtggtggtgggcagaggagtggtccgcgat
gccctctccaaaggactgagcagttacctgcgccggacagcgcgcagcatcctggacttg
ccctggcaggtcgtgcagatcgctgagaccagtcagcctgggctgttccggctatgggcg
gtgatagggagcgacctgcactgcatcaagctgagcatcccccgtgtcttctatgtcaac
cagcgtgtcccaaagcctgaggagggaacagcctacaggaaggtaaacagaatcctgccc
cgctccaacttagtttacaacttgtacgaatactctgttcctgaagacatgtaccaagag
cacatcaacgaaatcaatgcagacctctctgctccggacatcgagggagtgtatgagaca
caggtgccactgctattccgtgccctgatccacctgggctgtgtgtgcatggtcagcagg
cagcttgtccggcacctggcagggcgagaggctgaaaccttcaacattgagcacctggag
atgcgctcactggctcagttcacttacctggagccaggaagcattcgccacatctacctg
taccacagctcccagggcagcaaggcagtcctgggcctcttcatcccctcccaacgcaag
gctgctgtctttgtgctggacaaggtacgcagcaaccagatgccaaacctctccaccttg
ttctcagttgagcgcgcagctctgctggaaaaggtgggcaaggagctgttgcccccagac
aaacacacctttgaggtgcgtgctgagaccgaccccaaggccatctacagaggtgtccag
cggctgctctcgggctacaaggatgagcgccggggccccacattggtggctgtgcagtcc
aactgggacctgaagcagctggcaagtggaatccccatcatggaggagttccccttggtc
cccatccggctggtagacgacatcagctactctgtcctggactggcagcgccatgctgcc
cgccgcatgattcgccactacctcaacctggacacctgcctttcccaggcttttgagatg
agcaggtactaccacatccccattggaaacctccctgatgacatctccaccttcggctcc
gacttgttcttctcacgccaccttcatcgtcacaaccacctgttgtggctgtcccccaca
gcccgccccgacctgggggggaaggaggccgatgacaaccgcctggtcatggagtttgat
gagagagcctcagttgagatcaaccaccctggctgctactccacagtgtgtctggagctg
gacatccagagcctggctgtgaataccgtgttgcagtctcaccacgtgaatgacatggaa
ggaggctccagcatgagcattagcttcgatgtgattcagcaggcatccctggaggacatg
gtcacagggaaccaagctgccaacatcccagccagctatgatgaaactgccctctgctcc
aacactttcaggattttgaagagcatggtggtgagctgggtgaaggagattacgcagtac
cacaatgcctatgcagacaaccaggtcattcacttttaccgctggctccgctctccttcc
tccctgctttatgacccagcactgcaccgcacactccacaacatgatgaagaagcttttc
ctacagctggtggctgagttcaagcgcctgggctcctctgtggtctatgccaacttcaac
cgcatcatcctctgcaccaagaagcggcacattgaggatgccatcagctatatggagtat
atcatcaacagcatccactccaaggagatcttccactctctgaccatctcgttctcccgg
tgctgggagttcctgctctggatggacccagcaaattatggaggtatcaagggaaaagtg
gattctcgcatccactatggggagaaggacaccaggaagacattggaggaggagagtgag
gaagaggaggaggaggaggaggaggtggcgagggaagaagaggaggagaaaggggagcca
gatgtggaggagctgctggagaataactggaacatcgcgcagttcctgccccaggccggc
tcctgccagagctacttcttgatgatcatatcagcctacatcgtggctgtgtaccacagc
atgaaggaagaactgcggcgtaacactcctgggagcacccccatcaagaggaggagcacc
agccaggtgtcccaggaggctctgggggagctgagggccatgcctggcatgataaccttc
tcacaagattacgtggccaatgagctcacccaaagcttcttcaccatcacccagaagatc
cagaagaagatggctggttcccaaaatgccacagagccctcagatatgttcccagtcctg
cctggctcctacctgccactcaacaacccagctctagagttcatcaaatatgtctgcaag
gtcctctccctggatgccaacataaccaaccaggtgaacaaactacgccgggacctgctg
cgcctcatcgaggtgggcgagttctcagaagcagcccagtttcaggacccttgccgctcc
tatatgcttcctgaagtcatctgcaggaactgcaacttctgcagggatttggacctgtgc
aaggaccctgccctttcccaggacaggtcggtgctgcccggctggctctgccccagctgc
catgtgcagtatgatactgatgccattgagatggcactggtggaagccctgcagaagaaa
ctgatggcctttgtgctgcaggacctggtgtgcagaaagtgtcacggtgtgaaggagaca
cacatgcctgtgtactgcagctgtgctggagacttcgccctcaccatctcctcccaggtc
ttcatggaccatgtcagtgtcttccagaacattgcccgacattatggcatggcctacttg
ctggaaaccattgagtggctgctgcacaccaacctccagctccagcagtga
DBGET
integrated database retrieval system
