Molothrus ater (brown-headed cowbird): 118693112
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Entry
118693112 CDS
T11569
Symbol
PUS1
Name
(RefSeq) pseudouridylate synthase 1 homolog isoform X2
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mate03016
]
118693112 (PUS1)
Enzymes [BR:
mate01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
118693112 (PUS1)
Transfer RNA biogenesis [BR:
mate03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
118693112 (PUS1)
Prokaryotic type
118693112 (PUS1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Sol_i_2
HSF_DNA-bind
WC-rich
Motif
Other DBs
NCBI-GeneID:
118693112
NCBI-ProteinID:
XP_036249331
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All DBs
Position
18:5774018..5779590
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AA seq
401 aa
AA seq
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MAEDLIAAVASQTKRLNSSSEVVQRLEENGHLSKKLKSDADEEDAEDQNKKLPKRKIVLL
MAYSGKGYHGMQRNVGSSQFKTIEDDLVCALVQSGCIPENHGEDMKKMSFQRCARTDKGV
SAAGQIVSLKVRLIDDILEKINNHLPSHIRILGLKRVTGGFNSKNKCDARTYSYMLPTFA
FAHKDHEVQEELYRLDRETLERVNQLLACYKGTHNFHNFTSQKGPKDPSAKRYIMEMYCG
EPFVRENMEFAVIQVKGQSFMMHQIRKMIGLVIAIVKGYAAESIMERSWGEEKVDVPKAP
GLGLVLEKVHFEKYNRRFGNDGLHEPLEWTEEEEKIAVFKEQYIYPTIINTEREEKSMAS
WLKTLPIHDFNSSAVEVQTNNKNPKKSSDAEGSDGCGDDSD
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggatttgatagcagcggttgccagccagacaaagagactcaacagcagcagc
gaggtggttcaaaggctggaagaaaacgggcatctgagcaaaaagttgaagagtgacgca
gatgaagaagatgcagaggatcagaataagaagttacccaaaaggaagattgtgctgttg
atggcatattcagggaaaggctaccatggcatgcaaagaaacgtgggatcttcacagttc
aagacaatagaagatgacctagtctgtgcccttgttcagtcaggatgcatcccagagaac
cacggggaggacatgaagaagatgtctttccagcgctgtgctcggacagataagggtgtg
tctgcagctggacagattgtgtcactgaaggtcaggctaatagatgacattttagaaaag
atcaataatcatcttccttctcacatcagaattctgggcctgaagagagtcactggggga
ttcaactccaagaacaaatgtgatgccagaacctactcttacatgctgcccacgtttgcc
tttgcccataaggaccatgaagtgcaggaggagctttataggctggacagagagaccctt
gaaagggtcaatcagctgctggcctgctacaaagggacacacaacttccacaacttcaca
tcacagaagggccccaaggaccccagtgccaagaggtacatcatggagatgtactgtgga
gagccctttgtcagggaaaacatggaatttgcagtgatccaagtgaaaggtcagagtttc
atgatgcaccagatcaggaagatgattgggctggtgatagcaattgtgaagggttatgct
gctgagtccatcatggaacgcagctggggagaggagaaggttgatgtccccaaagcccca
ggacttgggctggttttggagaaagtgcactttgaaaaatacaacaggcgttttgggaat
gatgggctgcatgagccactggagtggacagaggaggaggagaagattgctgttttcaag
gagcagtacatctatcctaccattatcaacacagaaagggaggagaaatccatggcaagc
tggctaaaaaccctccccattcatgacttcaactcctctgctgttgaggtgcaaactaac
aacaaaaatccaaagaagagcagcgatgccgaaggcagcgatggctgtggtgatgactct
gactga
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