Molothrus ater (brown-headed cowbird): 118693202
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Entry
118693202 CDS
T11569
Name
(RefSeq) uracil-DNA glycosylase-like
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118693202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mate03400
]
118693202
Enzymes [BR:
mate01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
118693202
DNA repair and recombination proteins [BR:
mate03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
118693202
Prokaryotic type
118693202
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GlnD_5th
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
118693202
NCBI-ProteinID:
XP_036249497
LinkDB
All DBs
Position
18:complement(4268870..4273833)
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AA seq
295 aa
AA seq
DB search
MIGQRTLHSFFSPVPAKKRGRSPEPGGDTEVSAAKKAKEAGGNASQALSAEQQERIRKNK
EAARQLLAERNVPPGFGDSWRRQLAGEFSKPYFVELMAFVAEERKRYTVYPPPEQVFTWT
QMCDIWDVKVVILGQDPYHGPKQAHGLCFSVQKPVPPPPSLENIYKELSEDIEGFTHPGH
GDLTGWAKQGVLLLNAVLTVRAHQATSHKERGWEQFTDAVVSWLNKNLHGLVFMLWGAYA
QRKGSSIDRKRHHVLQTVHPSPLSVNRGFFGCRHFSKTNEFLQKSGKKPIDWKAL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggcagaggacgctgcactccttcttcagtcctgtgccggccaagaagcgcggg
cgctccccggagccgggcggcgatactgaggtgagcgccgccaagaaggcgaaggaagcc
ggcggtaacgcgagccaagcgctgagcgcggagcagcaggagcgcatccgcaagaacaag
gaggcggcgcggcagctgctggcggagcggaacgtgcccccgggcttcggcgacagctgg
cggcggcagctggccggggagttctccaagccctatttcgtggagctgatggcgttcgtg
gccgaggagaggaagcgctacacggtgtatccgccccccgagcaggtcttcacctggacg
cagatgtgcgacatctgggatgtaaaggttgttattttgggacaagatccataccatgga
cctaagcaagctcatgggctctgcttcagtgtccagaaacctgttccacctccccccagc
ttggagaatatttacaaggagctctctgaggacattgagggcttcacccaccctggccat
ggggacctgacgggctgggccaagcaaggggtgctcctgctcaacgcggtgctgacggtt
cgggctcaccaggccacgtcccacaaggagaggggctgggagcagttcacagatgctgtg
gtgtcctggctcaacaagaacctgcacgggctcgtcttcatgctctggggagcctatgcc
cagaggaaaggcagctccatcgacaggaagcgtcaccacgtcctgcagacggttcatccc
tcacccctctctgtcaacagagggttctttggctgccggcacttctccaagaccaatgaa
ttcctccagaaatctgggaagaagcccattgactggaaagcactctga
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