Molothrus ater (brown-headed cowbird): 118693561
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Entry
118693561 CDS
T11569
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118693561 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mate03019
]
118693561 (EXOSC2)
Messenger RNA biogenesis [BR:
mate03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
118693561 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
118693561 (EXOSC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
ECR1_N
KH_6
ECR1_N_2
EXOSC1
Motif
Other DBs
NCBI-GeneID:
118693561
NCBI-ProteinID:
XP_036250122
UniProt:
A0A7L3VK89
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All DBs
Position
20:6779175..6783221
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AA seq
294 aa
AA seq
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MAAVTMRLPAARAPLDSSALRGGEKHLVAPGDTITTDTGYMRGHGTYVEDDKLIASVAGV
VERVNKLVCVRALKARYNGEIGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSINLPGGE
LRRKSAEDELAMRDYLQEGDLISAEVQSIFSDGAVSLHTRSLKYGKLAQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTPEQKDDEAGGYTANLEPVPLSDREVISRLRN
CIMALVTHKIMLFDTSILYCYEASLPHQIKDILKPEVTEEIVLEARQRLLDSEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcaccatgaggctgccggcggcccgcgcgcccctggattctagcgcgctc
cggggcggcgagaagcacctggtggcaccgggggacaccatcaccacggacacgggatac
atgaggggccacggtacttatgtggaggacgacaagttgatcgcctcggtggccggcgtg
gtggagagggtgaacaagctggtgtgtgtcagggcgctgaaggccaggtacaacggcgag
atcggcgacatcgtggtcggcaggattacggaggttcagcagaagcgatggaaagtggaa
acaaattccaggctggattcagtcctgttgctgtcgtctataaatttacctggtggggag
ctgagaaggaaatcagcagaagatgagcttgcaatgagggactacctgcaggaaggggat
ctcatcagtgcagaggtccagtctatattttctgatggggctgtatcgctgcacacccgg
agcctgaagtatgggaagcttgcccagggtgtgctggttcaggtctctccctcccttgtg
aaacgccagaagactcatttccatgacctgccctgtggtgcctccgtgatcctcggcaac
aacggcttcatctggatctacccaaccccggagcagaaggatgatgaggctggaggctac
actgccaacttggagccagttcccttgtctgaccgggaggtgatctcacggctccgaaac
tgcatcatggctctggttactcacaagattatgctctttgacaccagcatcctgtattgc
tatgaagcatcccttcctcatcagatcaaggacattctcaagccagaggtgacagaggag
atcgttctggaagctcgacagaggttgctggattcggagggatag
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integrated database retrieval system
