Molothrus ater (brown-headed cowbird): 118693858
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Entry
118693858 CDS
T11569
Symbol
PECAM1
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04148
Efferocytosis
mate04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118693858 (PECAM1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118693858 (PECAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mate04090
]
118693858 (PECAM1)
00536 Glycosaminoglycan binding proteins [BR:
mate00536
]
118693858 (PECAM1)
04091 Lectins [BR:
mate04091
]
118693858 (PECAM1)
CD molecules [BR:
mate04090
]
Proteins
118693858 (PECAM1)
Glycosaminoglycan binding proteins [BR:
mate00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
118693858 (PECAM1)
Lectins [BR:
mate04091
]
I-type lectins (Siglecs)
118693858 (PECAM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
V-set
VEGFR1-3_N_Ig-like
Ig_C17orf99
Zwei_Ig_N
Ig_5
Motif
Other DBs
NCBI-GeneID:
118693858
NCBI-ProteinID:
XP_036250628
LinkDB
All DBs
Position
19:complement(8989146..9020762)
Genome browser
AA seq
734 aa
AA seq
DB search
MYLALLVIFLQCSELYAQGKVYQVFTFNGVKIKVEPSDKVKNGAPMSIICHADISKNTDF
QLKHNFTFFKDGKLVFMTISDKEDARYEIPVAKSADTGDYECRVKAGDKLVISKPIYVWV
AGMTKPILTADKKEVSEGEIVKLRCELPEEVPPLEFFFRKIKTNSEPIEKRVAEQNQNFS
EMEYYVEAGDNILQFDCFGKRQVKAGWESSQHSNKTLVTVKEPFRKPTLITRPSNNFTEG
DIIEFECSTVAAEMRGIEIIFQKNRTILNSVRDKKFLKYSTLATQEDSGEYQCKVEQGAV
SKTTKLNVFVSELFPKPTLSASMTQLDENKDLILNCSINGLRRANFSILRKSSSGDILLK
KSKILAIKVNVNDTGSYTCKAEVKGIIKESKPVRISVYAPVSKPTLSVVSGSPEVVLGKP
LQLICHSVMGTPPITFTFYKGDEIKKNVTNDTYATFLDEDIGLNDNGGYRCDARNNHSSG
VKTSNTLNVTVIVPIRGASLGSVPYGEVEVGSDTAFLCSVKEGSWPIDFKFFKKTDHEVL
LHKVREYSDRTIWHKKTMKRKDTGTYYCMASNRASADVRSRPITISVILAAWQKGVIAAF
VLTAMAGAGAVALWWFLRKKKKAKGPSMEMSGSALAPHLTSEKLTRPPSDGNYYSGSGYI
EDNENHMKSTDESKGPDLESAEVDYTEVEVSTLDPHRAPEQKGTETVYSEIRKTNNDSME
NRHSQRIYGHPDAT
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttgctcttctggtgattttcttgcagtgttcagaactttacgctcaggggaaa
gtctatcaagtttttactttcaacggagttaaaatcaaggttgaaccatctgacaaagtg
aagaatggagccccaatgtcaatcatctgccacgctgatattagcaaaaataccgatttc
cagctgaagcacaatttcacattttttaaggatgggaagcttgtatttatgaccatatca
gacaaagaagatgcacggtatgaaatacctgtggccaagtctgcagatacaggagactat
gaatgtagggtgaaagcaggtgacaagttggttatcagtaagcccatctatgtttgggtt
gcaggaatgaccaagccaatcctgactgctgacaaaaaagaagtttcagagggtgaaatt
gtgaaattacgttgtgagctgccagaagaagttcctcctttagagttctttttccggaag
ataaagacaaattcagagcctatagaaaaacgtgtagctgaacaaaaccaaaatttttct
gagatggaatattatgttgaagcgggagataatattttacaatttgattgctttggcaag
agacaagtaaaagctggatgggaaagctcccaacacagcaacaaaacacttgttacagtc
aaggaaccatttagaaagcccactctgatcactaggccctccaataactttacagaagga
gacataatagaatttgagtgctcaaccgtggctgctgaaatgcgtggcattgaaatcatc
ttccagaaaaacagaacaatactgaacagtgtacgagataagaaatttctgaaatactct
acattagctactcaagaggacagtggtgaataccagtgtaaggtggagcaaggagcagtg
tctaaaaccaccaaactgaatgtctttgtgtcagaattatttcccaagccaacactatct
gcttctatgactcagttggatgaaaataaagatttaattttgaactgcagcattaatggt
ttacggagagccaacttctctatcctacggaaaagttccagtggagacatcctgttgaaa
aaatctaaaatcttagcaattaaagttaatgtgaatgatactggatcttacacctgcaaa
gctgaagtaaaaggaataatcaaggagagcaaacctgtaaggataagtgtttatgctcca
gtctccaagccaactctttctgttgtcagtggctcaccagaggtggtattagggaagcct
ctacaattaatctgtcattcagtgatgggaacaccaccaataacattcacattctacaaa
ggggatgaaattaagaaaaatgtaactaatgacacatatgctacattcttggatgaagat
attggactaaatgacaatggagggtacagatgtgatgctagaaacaatcactccagcggt
gtgaaaaccagcaatactctaaatgtcacagtgatagtacccatcaggggtgccagtttg
ggcagtgttccgtatggagaagtagaagttggcagtgatactgctttcctctgctctgtg
aaggaaggatcttggccaattgacttcaagttttttaaaaaaactgatcatgaagttctt
cttcataaagtaagggaatattcagacagaaccatatggcacaagaaaacaatgaagagg
aaggacacagggacctattattgcatggcttcgaaccgagccagcgcggacgtgaggagc
cgtccaataaccatcagtgtcatcttagcagcttggcagaaaggagtcattgctgcattt
gtcctgacagccatggcaggagcaggagcagtcgctttatggtggttcttgcgtaagaag
aaaaaggctaaaggaccatccatggagatgtctggttctgccttggctccacacttgaca
agtgaaaaactaacaaggccgcccagtgatggaaactactattcaggatcaggttacatt
gaagataatgaaaaccacatgaaatcaacagatgagagtaaaggacctgaccttgagagt
gctgaggtggattacactgaagttgaagtctccacgcttgatcctcacagagctcctgaa
cagaaggggactgaaacagtttatagtgaaatcagaaaaactaataatgattctatggaa
aacaggcattctcagagaatatatgggcatcctgatgctacctag
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