Molothrus ater (brown-headed cowbird): 118694059
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Entry
118694059 CDS
T11569
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
mate
Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mate03021
]
118694059 (MED13)
Transcription machinery [BR:
mate03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
118694059 (MED13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
118694059
NCBI-ProteinID:
XP_036250863
UniProt:
A0A7L3V8H3
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All DBs
Position
21:8929340..8986844
Genome browser
AA seq
2179 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLSVWRRDQRPGRRELWIFWWGDDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGRWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
SQHQPVYLLSEEHLTLAQQSNSPFQVILSPFGLNGTLTGQSFKLSDSSTKKLIGEWKQFY
PVTSNLKEGSEEKQEEMDWEDDSLAAVEVLVAGVRMVYPACFVLVPQTDVPAPSSAGAPH
CSTACLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDAQSAQKWVKFSSVSDGLISDST
SHHGGKIPRKLANQVVDRVWQECNMNRAQNKRKYSATSNGLCEEETADKVASWDFVEATQ
RTNCNCSRHKNLKPRNSGQQGQAPPVGPQQPAAPKHKTNEKQDKGDKPQKRPLTPFHHRV
SISDDVAMEAESASQRLVMAAPDSQVRFAAIRSAEGAKAPPLHGAELGNSPQPPPLSPHP
CDGADEGVPKAPSTPQSQHFYQMPTPEPLVPTKAMEDRLDGLSQPFPAAFPEVIEPTVYV
GTAVNLEEEEADTTWKYYKVPKKKDVEFLPPQLPNDKLRDDPVIPAGQENVTSVTELMVQ
CRKPLKVSDELVQQYQSKNQYLTAVATEADQEPEIDPYAFVDGDVEFLFPDSKKDRQNME
REVGKKHKAEDGTSSVTVLSHEGEDAMSLFSPSVKQDAQRLAAHARTASTSLFHETDLVV
SYTDLDNLFNSDEDELTPGSKRTVNGTDDKSNCKEAKAGNLDPLSCISTADLHKMYPTPP
SLEQHIMGFSPMNMNNKEYGSMDTTLGGTVLEGNSSTVGAQFRIEVDEGFCSPKPAEIKD
YSYVYKPENCQALVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSWAVGKLDLLPPGPAMP
FIKDGDGSAMDQEYGPAYTPQTHTPFGMPPSSAPPSNGGAGILPSPSTPRFPTPRTPRTP
RTPRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILS
ESVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNSS
GLFLEDELDILGRNTECGKEAEKRFEALRATSIEHGSGGLKEPEKLPDDLILLLQDQCTN
LFSPFGAADQDSVAKVGAVSNLVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKT
TCLHHWSKRNVVDVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKM
AGRGSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDVAYVVVCP
ENEALLNGAKSFFRDLTAIYESCRLGQHRPICKLLPDGIMRVGPTASKKLSEKLVTEWFS
QTANANNDAFSKLKLYAQVCRYELGPYLASQPLDNSLLSQTNLVPPSSQAGSAVAPVTAP
AANPNTPASAPAAPTSSTIPVTSSSAMSSAATTANSTLTTTAPSSSSASLGSGIPTSKPS
SFPPFSNMNNAAPASLPAQAAPVPSAQTGGQQQQPTLQPAGMSGDTAAAPAQPHPEVSES
TMDRDKVGVPTDGDSHAITYPPAIVVYIIDPFTYEKKDENSSSSSLWTLGLLRCFLEMVQ
VLPPHIKNIISVQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTL
TGFGPGLAMETALRSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYC
LSHDQRWLLASCTDLYGEQLETCIINIDVPNRARRKKGSARRLGLQKLWEWCLGLVQMSS
LPWRVVIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLV
AMEPQGSFIIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASST
YTTENLDLAFNTNNDGADGMGIFDLLDTGDDLDPDIINILPASPGGSPVHSPGSHYPHGG
DMGKGQGTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLF
LKASLHLHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSC
LPIHFVVLNQLYNFIMNML
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctgcttcgtgccgaacggggccagcctggaggattgccattccaacctcttc
tgcctggctgatctgactggcattaaatggaagcgttacgtgtggcagggcccaacgtct
gcccccatcctgttcccggtgacggaggaggatcccatcctgagcagcttcagccgctgc
ctcaaggccgacgtgctcagcgtctggcgccgcgaccagaggcccgggcgcagggagctc
tggatattctggtggggggacgaccccaactttgctgacctgatccatcatgatctctca
gaagaggaggatggggtctgggagaacgggctgtcctacgagtgccgcacgctgctcttc
aaggccgtgcacaacctgctcgagcggtgcctcatgaacaggaacttcgtgcgcatcggc
cgctggttcgtcaagccctacgagaaggatgagaaacccatcaacaagagtgagcacttg
tcctgctcgttcaccttcttcctgcacggggacagcaacgtgtgcaccagcgtggagatc
agccagcaccagcccgtgtacctgctcagcgaggagcacctcaccctggcccagcagtcc
aacagccccttccaagttatcctgagcccctttgggttgaatggcacactcacagggcag
tccttcaagctttctgattcatccacaaagaagctgattggggagtggaagcaattctac
cctgtcacatccaacttgaaggagggatctgaggagaaacaagaagaaatggattgggag
gatgattctttagctgctgttgaagtccttgttgctggagtgaggatggtgtacccggcg
tgcttcgtgctggtccctcagacagacgtccctgctcccagctccgcgggggctccccac
tgctccactgcctgcctgggggtccaccaagtgcctgcttccaccagagaccctgccatg
tcctccgtcaccctgacgccgcccacgtccccagaggaggttcagacagttgatgctcag
tctgcccagaaatgggtgaagttttcctcagtttcagatggattgatctcggacagtacc
agccatcacggtggcaaaatccccagaaaactggccaaccaggtggtggacagagtctgg
caagagtgcaacatgaacagagcacagaacaagaggaagtattctgccacatcaaatggc
ttgtgtgaggaggagacagctgacaaggtggcatcctgggattttgttgaagccacgcag
aggacaaattgcaattgttcaaggcacaaaaatctcaaaccaagaaattcaggtcaacag
gggcaggccccacctgtgggcccccagcagccggcggctccgaagcacaagacaaatgag
aagcaagacaaaggggataagccacagaaacgccctttgactccttttcatcatcgtgta
tctatcagcgatgatgttgccatggaggcagagtcagcgagtcagaggctggtgatggct
gcccccgacagccaagtgaggttcgccgccatccgaagtgccgagggcgcgaaggcgccg
ccgctgcacggggccgagctggggaactccccgcagccgcccccgctcagcccccacccc
tgcgacggcgccgacgagggggtgcccaaagccccctccacgccccagagccaacatttc
taccagatgccaactccagagcccttggtgcccacgaaagcgatggaggacaggctggat
gggctgtcccagcccttccccgccgccttccccgaggtcatcgagcccaccgtgtacgtg
ggcactgccgtcaacctggaggaggaggaagctgacacgacttggaagtattataaagtt
ccaaagaaaaaggatgtggagttcttaccgccccagctcccaaatgataagttgagagat
gatccagtaatacctgctggacaggaaaatgtcacatcagtcacagaattaatggtgcaa
tgtaggaaacctttgaaggtttcagatgaactggtgcaacagtatcagagtaaaaaccaa
tatttaacagctgtagcaacggaagctgaccaggaacctgaaattgatccttatgccttt
gtggatggagacgtggaattcctctttcctgacagtaaaaaggacaggcagaacatggag
agggaagtggggaagaaacacaaggctgaggatgggacatccagtgttacagttctatcc
catgaaggagaggatgcaatgtctctgtttagtccttctgtcaagcaagacgcccagcgc
ttggctgcccacgcccgcacggcctccaccagcctgttccacgagacagacctggtggtg
tcctacactgacctggacaatctcttcaattctgatgaagatgaactcacacctggatcc
aaacgaacagtgaacggcactgatgacaaatccaactgcaaagaggcaaaagcaggaaat
ctagacccactgtcatgcataagcactgcagatctccataaaatgtatccaactccccct
tcactggaacaacatattatggggttttctccaatgaacatgaacaataaggagtatggc
agcatggacactacacttggaggaacagtgctggaagggaatagctctactgtgggggct
cagttcagaatcgaagtggatgagggtttctgcagccccaaacctgctgaaatcaaggat
tattcttatgtttataaacctgagaactgtcaagctttagtgggatgttccatgtttgca
ccactgaagactcttcccagccagtgtcttcctcccatcaagctgcccgaggagtgcatt
taccgccagagctgggctgtggggaagctggatctgcttcctccaggccctgccatgcct
ttcatcaaagatggcgatgggagcgccatggaccaggagtacggccctgcctacacgccc
cagacgcacactccgtttgggatgcccccgagcagcgcccctcccagcaacggtggggct
ggaatcctcccctctccttccacccctcgcttcccaactcccaggacgccaaggactccc
cgcacgccccgcggagccggcgggcccgcgagcgcccagggctcggtgaaatacgagaac
tcggatttgtactcgccggcctccacgccctccacgtgccggcccctgaactcggtggag
cccgcgacggtgccttccatccccgaggcacacagcctgtacgtgaacctcatcctctcc
gagtccgtcatgaacctcttcaaagactgcaacttcgacagctgctgcatttgtgtttgc
aatatgaacatcaaaggtgctgacgttggagtttacattcctgatccaacacaagaggcc
cagtataggtgtacctgtggtttcagtgctgttatgaatagaaaatttggcaacagttcc
gggctgtttcttgaagatgagttggatattctggggcgaaacacggagtgcggcaaagaa
gcagaaaaacgctttgaggctctcagagctacttccattgaacacggcagtggagggctg
aaagagcctgagaagctgcccgatgacttgatactgttgctgcaggatcaatgcaccaac
ctgttctcaccctttggagcagcagaccaagactccgtggccaaagttggtgctgtcagc
aacctggtacgtgtagaagaaagggattgttgcaatgactgctacttagccttggaacat
ggacggcagttcatggacaatatgtcaggagggaaagttgatgaagcacttgtgaaaact
acttgcttgcaccactggtcaaaaagaaatgtggtggatgtgagcatgcagtgctcccag
gacatcctgcgcatgctgctctcgctgcagcccgtgctgcaggacgccatccagaagaag
cggacggtgcggtcctggggcgtgcagggccccctcacctggcagcagttccacaaaatg
gctgggagaggctcctatggaactgacgagtccccagaaccactgccaatcccaacattt
ttgttgggatacgattacgatttcctggtgctgtctccgtttgcattgccctactgggag
aggctgatgctggagccctacggctcccagcgagacgtcgcttacgtcgtggtgtgcccg
gagaacgaggccctgctcaacggagccaaaagcttctttagggatctgactgcaatatat
gagtcctgcaggcttggtcagcacagacctatctgcaagttactgcctgatgggatcatg
agggttggccctacagcctccaagaagctgtcagagaagttggtcacagagtggttctca
cagacagccaatgccaacaacgatgcgttctccaaactcaaactctacgctcaagtttgc
agatatgagctgggtccttatcttgcttctcagcctttggacaattctctactttcccaa
accaacctggtccctccctccagccaggcaggctctgctgtggccccagtgacagcccct
gctgccaatcccaacactccagcgtcggctcccgccgctcccaccagcagcaccatccca
gtgacctccagcagtgccatgtcctcggcagccaccacagccaactccaccctgaccacc
actgccccatcctcctcctctgccagcctgggcagcggcattcccacgagcaagccttcc
tcgttcccgcccttcagcaatatgaacaacgccgctcctgcctccctgcccgcccaggct
gcgccggtccccagcgcgcaaacgggggggcagcagcagcagccaacgctgcagccagcg
gggatgtctggagacacggctgcagcacctgcacagccccacccagaggtttctgaaagc
actatggatcgtgataaagtcggagtccccacagatggagattcacatgctatcacctat
ccacctgcaattgtagtttacataattgatcctttcacctatgaaaaaaaggatgagaac
agcagctcatccagtttgtggacacttggacttctgcgctgctttctggagatggttcag
gttcttcctccccacatcaagaacatcatttctgtgcagattgtcccatgtcagtacctg
ctgcagcctgtgaaacacgaggacaggcagatttacactcagcatttaaaatctttggca
ttttcagctttcactcagtgtcggagacctctcccaacttccaccaatgtgaaaacctta
actggctttgggccagggttagccatggaaactgctcttaggagccctgatagacctgag
tgtattcgactctacacccctccttttatactggctccagtgaaggacaagcaaacagag
ctgggagaaacctttggagaagctggccagaagtataatgtgctttttgtgggctactgt
ttgtctcatgatcagaggtggctgcttgcatcctgtacagacctctatggagagcagtta
gaaacttgcataattaatattgatgtaccaaacagggctcgtaggaaaaagggttctgcc
cgcagacttggtctccagaagctctgggaatggtgcctggggctggtgcagatgagctct
ttgccatggagagttgtcataggccgcttgggaagaataggacatggggaattaaaagac
tggagctgtttgctgagccgccggaacctgcagtcgctgagcaagcggctgaaggacatg
tgcaggatgtgtgggatctctgctgcagactcccccagcatcctcagtgcttgcttggtg
gccatggaaccccagggatccttcattattatgccagattccgtgtccacgggctcggtg
ttcgggcgcagcaccactctgaacatgcagacgtcgcagctgaacacgccccaggacacg
tcctgcacccacatcctggtgttccccacctctgcctccgtgcaggtggcatcatccact
tacaccactgagaacctggacctggcctttaacacaaacaatgatggagcagatggaatg
ggaatctttgacttgttagacactggagatgatcttgatcctgatattataaatattctt
cctgcatctcctggtggatcccctgtacattctccagggtcccactacccccatggaggt
gatatgggcaagggtcaaggcacagatcgattgctttccacagaatctcacgatgaagta
acaaatatactgcagcagccactggccctcggttactttgtgtcaactgccaaagcaggt
ccattgcctgactggttttggtcagcgtgtcctcaagcacaaaatcagtgtcccttgttt
cttaaggcctctttgcacctccacgtgccttcagtgcaatcagacgagctactccacagt
aaacactcccatccacttgattctaatcaaacttctgatgtgctcaggtttgttctggaa
cagtacaatgcactctcctggctaacctgtgatcctgcaacccaggacagacggtcatgt
ctcccaattcattttgtggtgctgaatcagttgtataactttatcatgaatatgctgtga
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