Molothrus ater (brown-headed cowbird): 118694092
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Entry
118694092 CDS
T11569
Symbol
SUPT6H
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mate03021
]
118694092 (SUPT6H)
03036 Chromosome and associated proteins [BR:
mate03036
]
118694092 (SUPT6H)
Transcription machinery [BR:
mate03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
118694092 (SUPT6H)
Chromosome and associated proteins [BR:
mate03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
118694092 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
118694092
NCBI-ProteinID:
XP_036250913
LinkDB
All DBs
Position
21:7027876..7055313
Genome browser
AA seq
1721 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEELNLDDQDEQGNLKGFIND
DDDEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKM
SDDEDDEAEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPQEEEEEEEEDESDIDD
FIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYEYE
DEEAEGETRVRPKKAAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLRSI
PVKSAEDDELEEEADWIYRNAFATPTISLQETSDYLDRGQASSFGRKGPSTIQKIKEALN
FMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQAYQ
YEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKA
ARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQAAGLDGLAKKFGLTP
EQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREPLVR
QVLRQTFQERAKINITPTKKGKKDIDEAHYAYSFKYMKNKPVKELRDDQFLKMSLAEDEA
LLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFLYV
QMAKELKNKLLVEAKEYVLKACSRKLYNWLKVAAYRPDQQVEEDDDFMDENQGKGIRVLG
IAFSSARDHPVFCALVNGEGEVTDFLRLPHFXKRRNAWREEEREKKAQDIETLKKFLLNK
KPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSENEF
RDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYCEFI
NRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHM
GPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDA
NPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPYRS
PNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQ
DNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVGMTV
HCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDMKRKQQRT
TYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHVDV
REEGKENAFSLGSMLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDKKKL
EELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPT
VNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQM
FSAIAAVTGQGQNPNATPAQWGSSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSYSY
TTPSQPITTPQYQLQANTTPQSTQSQSQPSSSSRQRQQPKTNTHAAIDWGKMAEQWLQEK
EAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtggagagcgaagcagaggagtcagaggaggagtacaaccaggatggg
gaggttgtacccagagtaaccaagaagtttgtagaggaagatgaggatgatgaagaagaa
gaggagctgaacctcgatgatcaggatgagcaggggaacctgaaaggattcattaatgat
gatgatgatgaggaagaggaagaggaagccagtgactctggagactctgaggatgacgtt
ggccacaaaaagagaaagcgcacttttgatgaccgcctggaggatgatgactttgacctc
attgaagaaaacttgggcgttaaagtcaaaagacaaaaattcaggcgtgtgcgaaaaatg
tctgatgatgaggatgatgaagcagaagattatggaaaggaagagcacgaaaaggaagcc
attgctgaagaaatctttcaggatggcgaaggcgaggaaggaggggaagctgtggaagct
cctgttgctccacaggaagaggaagaggaggaggaggaagatgaatctgacattgatgac
ttcattgtggatgatgatggacaacctctgaagaagccaaaatggagaaagaagcttcca
ggatacacagatgctgctctgcaggaagcccaggaaatctttggcgtggactttgactac
gatgagtttgagaagtacaacgagtatgatgaggagatggaggaggagtacgagtacgag
gatgaggaggcagaaggggagacgcgcgtgcggcccaagaaggcggccaagaaacgcgtc
agccgccgcagcatcttcgagatgtatgagcccagtgagctggagagcagccacctcaca
gaccaggacaacgagatccgcatgacagacatgcctgagaggttccagctgagatccatc
ccagtgaagagtgctgaagatgatgagctggaggaagaagctgactggatttataggaat
gcctttgcaactcccaccatctccttgcaggaaacttctgactaccttgaccgtggacaa
gccagcagctttggccgcaaggggcccagcaccatccagaagattaaagaagccctgaat
ttcatgagaaatcagcattttgaggtcccattcattgccttctacagaaaggagtatgtg
gagccagaactacacatcaatgacctgtggagggtctggcagtgggatgagaagtggacc
cagctgaagatccgcaagcagaacctgactcgactgtttgagaagatgcaggcctaccag
tatgagcaaatctctgctgacccagacaagcccttggctgatggaataagggccctggat
actactgacatggagaggctgaaggacgtgcagtccatggacgagctgaaggatgtgtac
aatcacttcctgctgtactatggcagagacattcccaagatgcagaatgctgccaaggct
gctcgcaaaaagcaaaagcgtatccgggaggatggtgaagaagaggaaggtgaaggggag
gatgcagaggatgatgagcagaaggggcctgagctgaagcaggcttcccgaagggatatg
tacaccatctgccaggcagctgggctggatggcttggctaagaaatttggtctgacacct
gagcagtttggagagaatctccgagacagttaccagcgtcatgagacagagcagttccct
gcagagcccctggagctggccaaggattatgtgtgtagtcaattcccaagcccagaagca
gtgctggaaggagctcggtacatggtggctttgcagatcgccagggagcccctggtcaga
caggtcctgaggcagactttccaagaacgagctaaaatcaacattacaccaaccaaaaag
gggaagaaggatattgatgaagcccactatgcctattcctttaaatacatgaagaacaag
cctgtgaaggagctgagagatgaccagttcctgaaaatgagcctggcagaggatgaggca
ctgctcaccatagatatcagcattgacatgaaaggagtagagggttatggcagtgaccag
acgtactttgaggaaatcaagcagttctattaccgggacgagttcagtcaccaggtgcag
gagtggaaccggcagcgcaccatggccatcgagcgctccctcaaccagttcctctacgtg
cagatggccaaagaattaaagaacaagctcttagtggaggccaaggagtatgtcctcaag
gcttgcagccgcaaactgtacaactggctgaaggttgctgcatacaggccagatcagcag
gtggaggaagacgatgatttcatggatgagaaccaagggaaggggatccgggtgctgggc
attgccttttcatcagccagggaccaccctgtgttttgtgccctcgttaacggagagggt
gaggtcacagatttcctccgactgccacattacaaaagaaggaatgcctggcgtgaggag
gagagggaaaaaaaggcccaggatattgaaacattgaaaaaattcctcctgaacaagaag
cctcacgtggtgacaattgcaggcgagaacagggatgctcagatgctgatggaggatgta
aagagaattgttcatgagctggaccaagggcagcagctgtcctcaattggagtggagctg
gtggacaatgaactggccatcctctacatgaacagcaagaagtctgagaatgaattccgg
gattacccccctctgctgcgccaggctgtgtccctcgctcgccgcatccaggaccccctc
attgagtttgcccaggtctgcagctctgatgaggatattctctgcctgaaactccaccct
ctgcaggagcacgtggtgaaggaggagctgctgaacgcgctctactgcgaattcatcaac
cgtgtgaacgaggtgggggtggatgtgaacagggccattgctcacccccacagccaggct
ctgctgcagtacgtgtgtggcctgggaccacgcaaaggcactcacctgctgaagatctta
aagcaaaacaacacccgtctggagaacaggacccagctggttacgatgtgtcacatggga
cccaaagtgtttatcaactgtgctggcttcatcaaaattgacacagcatcactgggtgat
agcactgattcctacattgaagtcttagatggctctagggtccatcctgaaacctatgaa
tgggccaggaaaatggcagtggatgccctggaatatgatgagtcagctgaggatgcaaat
cctgcaggagctctggaggagatcctggaaaaccccgagcgcctgaaggacctggatctc
gatgcctttgctgaagaactggaaagacagggctatggtgacaagcacatcactttgtat
gacattcgagctgagctaagctgcagatacaaggacctgagaaccccgtaccgttctccc
aacacagaggaggtcttcaatatgctgaccaaagaaactccagagacattttacataggt
aaaatgatcatctgcaatgtgactgggattgcccacaggcgcccacagggagagagctac
gaccaggcgatacggaatgatgaaactggcctttggcagtgccccttctgccagcaggac
aacttcccagagctcagtgaggtttggaaccattttgacagcggttcctgcccaggtcag
gccattggagtgaagacacgtctggataatggtgttgctggcttcatcccaacaaaattt
cttagtgacaaggtggtcaagaggccagaagaaagggtgaaggtgggaatgaccgtccac
tgccgcatcatgaagattgacatcgagaagttcagtgcagacctgacctgcaggacctca
gacctgatggacaagaacaacgagtggaaactgcccaaagacacctactacgacttcgac
tctgaggcagcagaccacaaacaggaagaagacatgaaaagaaagcagcagaggacaacg
tacatcaagagggtaattgctcacccatcattccacaacatcagcttcaagcaagcagag
aagatgatggagaccatggaccaaggggatgtgatcatccggccgagcagcaaaggggag
aaccacctgactgtcacctggaaggtcaacgatggcatctaccagcacgtggatgtccgg
gaggagggcaaggagaatgccttcagcctgggctccatgctctggatcaacacagaggag
tttgaagacctggatgaaattgttgctcgttatgtccagccaatggcttcttttgccaga
gacctgttgaaccacaaatactatcaggactgcaatggtggagacaagaagaagctggaa
gagctgctgataaagaccaagaaagagaagccaacatttattccatactttattagtgcc
tgtaaagacctacctggtaaattcctcttgggatatcagcctcgaggcaaaccaaggata
gagtatgtgacagtgactccagagggattccgctaccggggccaagtcttccctactgtg
aatggacttttccgatggtttaaggatcattatcaggaccctgttccaggtatcaccccc
agcagcagcagtcggaccaggactccagcctccattaatgctactccagctaacatcaac
ctggcagacctgacacgtgcagtgaatgctctgccacagaacatgacctcccagatgttc
agtgccattgctgctgtgacaggccagggacagaacccaaatgccaccccagcacagtgg
ggctccagccagtacggctacggaggcagcggaggcggcagcagcgcgtatcacgtgttc
acaactccagcacagcagccagtggccacccctctgatgacccccagctactcctacact
actcccagccagcccatcaccacaccccagtaccagctgcaggccaacaccacaccccag
tccacccagtcccagtcacagccctcatccagctccaggcagaggcagcagccaaagacc
aacacccatgctgccatcgactggggcaagatggccgagcagtggctgcaggagaaggag
gctgagcggaggaaacagaagcagaggttgacccctcggccctctcccagccccatgatc
gagagcacgcccatgtccatcgccggggacgccacgcctctcctggatgagatggatcga
tag
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integrated database retrieval system
