Molothrus ater (brown-headed cowbird): 118694187
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Entry
118694187 CDS
T11569
Symbol
POLR2J
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03020
RNA polymerase
mate03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118694187 (POLR2J)
09124 Replication and repair
03420 Nucleotide excision repair
118694187 (POLR2J)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mate03021
]
118694187 (POLR2J)
03400 DNA repair and recombination proteins [BR:
mate03400
]
118694187 (POLR2J)
Transcription machinery [BR:
mate03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
118694187 (POLR2J)
DNA repair and recombination proteins [BR:
mate03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
118694187 (POLR2J)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
118694187
NCBI-ProteinID:
XP_036251063
LinkDB
All DBs
Position
21:complement(5176533..5178199)
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcctccggccttcgagtccttcctgctcttcgagggcgagaaaaagatcacc
atcaacaaggacaccaaggtgcccaacgcctgcctcttcaccatcaacaaggaggaccac
acgctcggcaacatcatcaagtcgcagctgctcaaagacccccaggtgctgtttgcaggg
tataaggtcccacaccctctggaacataaaatcatcatccgtgtccaaaccaccccagat
tacagcccccaggaagctttcaccaatgccatcacagacctgatcagtgagctctccctc
ctggaggagaggttcagggttgctattaaggacaaacaagaaggaattgagtaa
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