Molothrus ater (brown-headed cowbird): 118694277
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Entry
118694277 CDS
T11569
Symbol
NLE1
Name
(RefSeq) notchless protein homolog 1 isoform X1
KO
K14855
ribosome assembly protein 4
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mate03009
]
118694277 (NLE1)
Ribosome biogenesis [BR:
mate03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
118694277 (NLE1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
ANAPC4_WD40
WDR90_beta-prop_4th
DSE1_N
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
ASA1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
CFAP251_N
NLE
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_NOL10_N
PAC11
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Tricorn_2nd
Beta-prop_HPS5
TRM82_WD
Ge1_WD40
Beta-prop_SPT8
WD40_RFWD3
PD40
RMC1_N
Beta-prop_WDR75_2nd
Beta-prop_NWD2_C
FAD_binding_9
Tricorn_N
Cytochrom_D1
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
118694277
NCBI-ProteinID:
XP_036251183
LinkDB
All DBs
Position
21:8180554..8192000
Genome browser
AA seq
483 aa
AA seq
DB search
MAANMSPDEEDVQRLLIQFRDEAGECLGSPFDVPVTITPDKLQLVCNALLQKDEPVPLAF
FVHDAEIVASLEKTLAGQSVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHTEAVISVAF
SPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFL
WDPATGSQIGRVLSGHSKWITCLCWEPLHRNPECRYLASASKDGSIRIWDTLMGRCDKIL
TSHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGVLCRTLQGHAHWVNTMALSTDYVLR
TGAFEPAEATINPQDVKGSLSELKDRALQRYNQVRGQEPERLVSGSDDFTLFLWRPAEDK
KPLERMTGHQALINQVLFSPDTRTIASASFDKSIKLWDGRTGKYLTSLRGHVSAVYQIAW
SADSRLLVSGSSDSTLKVWDAKTKKLAIDLPGHADEVYAADWSPDGQRVASGGKDKCLRI
WRR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaacatgtcgccggacgaggaggatgtgcagcggctcttgatccagttccgc
gatgaggcaggggagtgcctgggctcccccttcgacgtcccggtcaccatcaccccggac
aagctgcagctggtctgcaacgccctcctacagaaggatgagccggtgcctctggccttc
ttcgtccacgatgccgagatcgtggcgtcgctggagaagactctggcagggcagagcgtg
gagacagagaaggtcctggacatcatctaccagccgcaggcagtgttcagggtgcgggcg
gtgacacgctgcaccagctccctggagggacacaccgaggccgtcatctcggtggctttc
agccccacgggaaagtacctggcaagtggctctggagacaccactgtccgtttctgggac
ctgagcacggaaacgccgcagttcacggccaaaggtcaccggcactgggtgctcagcatt
gcttggtcacctgatggcaagaaactggcctcgggctgcaagaacagccagatcttcctc
tgggacccagccactggcagccagatcggccgggtgctctctggccactccaaatggatc
acatgtctgtgctgggaaccgctccacagaaacccagagtgccgttacctggccagtgcc
tccaaggacggcagcatccgcatctgggacacgctgatgggcaggtgtgacaaaatcctc
acaagccacacgcagtcggtgacctgtgtgaagtgggggggcgatggcttgctctactcc
tcctcccaggacaggaccatcaaagtctggaggagccaggatggtgtcctgtgccgcacg
ctgcagggccacgctcactgggtgaacaccatggccctgagcaccgactacgttctccgc
accggcgccttcgagccggccgaggccaccatcaacccccaggatgtcaaaggctccttg
tcagaactgaaagacagggcactgcagaggtacaaccaagtccggggccaggagccagaa
aggcttgtctcggggtcagatgatttcaccctgtttctttggagaccagcagaagacaag
aagccactggagagaatgacaggccaccaggcattgattaaccaagtcctgttctcacca
gacacccggaccatcgctagtgcttcctttgacaagtccataaagctctgggatggtagg
acaggaaagtacctgacgtcgctgcggggccacgtctcggccgtgtaccagatcgcctgg
tcagccgacagccgcttgctggtgagcggcagcagcgacagcaccctcaaggtctgggat
gccaagacaaagaagctggccatcgatctgcctggccacgccgatgaggtgtatgcagcg
gattggagcccggacggacagagggtggcgagcggagggaaggacaagtgtttgcggata
tggcgtcgatag
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integrated database retrieval system
