Molothrus ater (brown-headed cowbird): 118694306
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Entry
118694306 CDS
T11569
Symbol
NCOR1
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor corepressor 1
KO
K04650
nuclear receptor co-repressor 1
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118694306 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mate01009
]
118694306 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mate03036
]
118694306 (NCOR1)
Protein phosphatases and associated proteins [BR:
mate01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118694306 (NCOR1)
Chromosome and associated proteins [BR:
mate03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
118694306 (NCOR1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
NCOR1_N
Myb_DNA-bind_6
DUF7952
Motif
Other DBs
NCBI-GeneID:
118694306
NCBI-ProteinID:
XP_036251223
LinkDB
All DBs
Position
21:complement(7849670..7905372)
Genome browser
AA seq
2533 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPPHSVQYSFPSSRHQQEFAVPDYRSSHLEVSQATQLLQQQ
QQQQQLRRRPSLLSEFHPGSDRPQERRTGYEQQFHPGPSQTDHDSLESKRPRLEQVSDSH
FQRVSAATVLPLVHPLQEGLRSADIKKDPAFGGKHEGPSSPISGQPCGEDQNASPSKLSK
EELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPERPVSPPPVEQKHRSIVQI
IYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRNH
ARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQER
FQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKFI
NMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKNVPDCVLYY
YLTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKVEEEKSDKSEKKEEEKKDEE
EKDEKEESKENTKEKDKTEVAPEETEEREQAAPRGRKTANSQGRRKGRITRSMTNEAAQA
NAAAAAATEEPPPPLPPPPEPSSTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGT
KSEAQCKNFYFNYKRRHNLDSLLQQHKQKSSRRPREERDVSQCESVASTVSAQEDEDIEA
SNEEENPEDSEGAENSSDTESAPSPTPAEPAKPTEETPSEPTAPKGTTEAPAEQESAIKP
ATSTSPSLPAQSVTTAETQNPEPQVKEEINTEAEEPMEVDSRSHSAEAKPVITLPVHTKV
EPVETEMRLPENIQVKIESDTKEREMEKPKEKSEPEEMDYSLPQQVTAARPESHSDNDSS
ATCSADEEVDGEPDRQGIFSRESKPSLLNPTGSILVSSTIKQGQMDLQQLHHRAAVIPPM
VSCSPCSVPVGTPVSGYALYQRHIKAMHESALLEEQRQRQEQLDMEYRSAVSPCGTSKSP
SVEWEGKPVAYMPYAEVKRIEQEAQVQNPATRSASPYRLSPREVNKASPQPEMNAARYSV
PPVLQPAPHQVITNIPEGVRLPTTRPTRPPPPLIPSSKTSVPSEKPSFIMGGSISQGTPG
TYLTSHSQASYAQETAKPSVGSISLGLPRQQESAKSASLPYIKQEEFSPRSQNSQPEGLL
VRAQHESVVRGTTTIQEGSITRGTPTNKVSVETIPSLRGSITQGTPALAQPGIAADTLLK
GTITRLATEDSSPEKCREEASAKGHVIYEGKSGHILSYDAIKNVREGTRSPRTAHEIGLK
RTYDTMEGNIKQGMSLRESPGSAPLEGLICRALPRGSPHAELKERTVLSGSIMQGTPRAT
AESFEEGLKYPKQIKRESPPIRTFEGAISKGKPYDGVTTIKEMGRSIHEIPRQDLLSQES
RKTPEMVQTSRPIIEGSISQGTPIKYESNSGQSAIKHNVKSLITGPSKLXRGMPQLEMVP
ENVKVVERGKYEDVKTGDAVRSRHTSVVSSGPSVLRSTLHETPKSQLSPGIYDDTNARRT
PVNYQSPMSRSSPMMNRVSEAGVSSGKSANHERKNTLTPTQRESVPAKSPVPGVDPVVAH
SPFDPHHRGATPEVYRGHLPPHLDPAMPFHRALDPAAAAYLFQRQLSPTPGYPSQYQLYA
MENTRQTILNDYITSQQMQVNLRPDVTRGLSPREQTLALPYAGARGIIDLNNMAPTILVP
HPGGTSTPPMERITYIPGTQLTFPPRPYNPASLSPGHPTHLAASAAANAEREREREREKE
RERERERERERERERERERERITSVPAELYLRPGAEQPGRPGSHGYVRSPSPSVRSQENI
LQQRPSIFQGTNGTSVITPLDPAAQLRIMQLTPGAPSITQGLPASRYNTAADALAALVDA
AASAPQMEVAKSKENKHEGARIEENMGRRSAVVTDQQQMEQKTLEVEKRPVQCPYTSANY
SGGKSQGQTSSVVYSEAGKEKGPPPKSRYEEELRTRGKTTITAANFIDVIITRQIASDKD
ARDRGSQSSDSSSSLSSHRYEAPGDAIEVISPANSPVPAQEKLQPYQQETPKPNQAETDP
NRPYEGPIHRYRTQQEPPSPQQPPPPSSQAEGMAHVPRTHRLITLADHICQIITQDFARN
QAASQASLQPPTTTFQNSSPAPTPASGRAKPSSRYSPEAQPQPVHQQRPGARVSPENLSD
KARGRPGKSPERSHVPSEPYEPISPPQVPVVHEKQENVLLLSQRTEPTEQRTDSRSPGSI
SYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDMATAQPGTEIFNLPAVTTSGAVS
SRGHSFADPASNLGLEDIIRKALMGNFDDKSEEHGVVMSQPLSVAPGSSGAAVPATNETR
REEANPSPNSGGAVSKQKLIGKSNSRKSKSPIPGQGYLGTERPSSVSSVHSEGDYHRQTP
VWAWEDRPSSTGSTQFPYNPLTMRMLSSTPPTSIACAPPSMSQATTHPQNRIWEREPAPL
LSAQYETLSDSDD
NT seq
7599 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggctaccctccgaaccaaggagctttcagcacggagcagagccggtac
ccgccgcactcggtgcagtacagcttccccagcagccgccaccagcaggaattcgccgtt
cccgactatcgctcctctcacctggaggtcagccaggccacgcagctcctgcagcagcag
cagcagcagcagcagctccggcgccggccctcgctgctctccgagttccacccgggctct
gacaggcctcaggaaaggagaactggatatgaacagcagttccatccaggtccatctcag
actgatcatgattctctggagtctaagcgaccacgtcttgagcaagtgtctgattcccat
ttccagcgtgtcagtgcagccactgtcttgcctttagtgcatcctctgcaggaagggttg
aggtctgcagatattaagaaggacccagcttttggaggaaagcatgagggaccatcttct
ccaatttctggtcagccttgtggggaggaccaaaatgcttcaccttccaagctgtcaaag
gaagaactgatccagagcatggaccgcgtcgatcgtgaaattgcaaaagtggagcagcaa
atcctgaaactgaagaaaaagcaacaacaacttgaagaagaagctgcaaagcctccggag
ccggagcggccggtgtccccccctcccgtggagcagaagcaccgcagcatcgtccagatc
atttacgatgagaaccggaaaaaagcagaagaagctcacaagatttttgaaggtcttggt
ccaaaagttgaattgccactttacaaccagccctcagacaccaaggtctaccatgaaaac
atcaaaacaaaccaggtgatgaggaaaaagctgatcctattctttaaaagaaggaaccat
gcaaggaaacaacgggaacagaaaatctgtcaacgttatgatcagctgatggaggcatgg
gagaagaaagtggacaggatagaaaataatccacgcaggaaagccaaggagagcaaaaca
cgagagtactatgagaaacaattcccagaaatcaggaagcagagagaacagcaagaaaga
ttccaaagagttggccaaagaggggctggcctttcagcaaccattgccagaagtgagcac
gagatctcagaaatcatcgatgggctctctgagcaggagaataatgagaagcaaatgcgc
cagctctctgtcatccctcccatgatgttcgatgcagagcagagaagggtgaagttcatc
aacatgaacgggctcatggaggatcccatgaaggtttataaagacaggcagttcatgaat
gtctggacagaccatgagaaggagatttttaaggaaaagtttgtccaacatcccaagaac
tttggtctaattgcttcctacttggaacgaaagaatgttcctgactgtgtattatattat
tatttgaccaagaaaaatgaaaattataaagcccttgtgcgaaggaattatggcaaacgc
agaggaagaaaccagcaacagattgctcgtccttctcaagaagaaaaggtagaagaaaag
gtagaagaggaaaaatcagacaaatcagaaaaaaaagaggaggaaaagaaagatgaggag
gagaaggatgagaaggaggaatctaaagagaataccaaagaaaaggacaaaactgaagtt
gcaccagaggaaacagaggaaagggagcaggcagctcctcggggccggaaaaccgccaac
agccaaggtcggcgtaagggcagaatcaccaggtcaatgacaaatgaagctgcacaggca
aatgctgctgcagctgcagccactgaagagccaccaccacctctgccacccccaccagaa
ccttcttctacagagcctgtggagacatcccgttggacagaagaagaaatggaagttgct
aagaaaggtctagtggaacatgggcgaaactgggcagcgattgccaaaatggttgggacg
aaaagtgaagctcagtgtaagaacttctacttcaactacaaaaggagacacaacctggac
agtctcctccaacagcacaaacagaagtcttcgcgaaggccccgagaggagcgagatgtg
tcccagtgtgagagtgtggcttccactgtgtcagcccaggaggatgaagacattgaagca
tctaatgaagaagagaacccagaagacagtgaaggtgctgaaaatagttctgatacagaa
agtgctccatctccaactccagcagaacctgctaaaccaactgaagaaactccatctgag
cccactgctccaaaaggaaccactgaggccccagcagagcaggaatctgccattaaacct
gcaaccagcacatctccctccttaccagcccaaagtgtaacaacagctgaaactcagaac
cctgagccccaggtcaaggaagaaataaacactgaggctgaggagcctatggaggtggac
agtagaagccattcagctgaagctaagcctgtgattactcttccagttcataccaaagta
gaacctgtagagactgaaatgaggctaccagagaatattcaagtgaaaatagagagtgat
accaaagagagagagatggagaaacccaaggaaaagtcagaaccagaggaaatggactac
agcctgccccagcaagtgactgcagccagaccagaatcccattcagataatgactccagt
gccacctgcagtgctgatgaggaagttgatggagaacctgacaggcagggtatcttcagc
agagagtcaaagccctcactgttaaatcccactgggtcaatcctggtatcatccacaata
aagcaagggcagatggacctgcaacagcttcaccaccgagctgctgtcatcccacctatg
gtttcctgcagcccctgctctgtccccgtgggcaccccagtcagtggttatgccctctac
cagaggcacatcaaggccatgcacgagtcagccctgctggaggagcagcggcagcgccag
gagcagctggacatggaatatcggagtgctgtgagcccctgtggcacctccaagagcccc
agtgtggagtgggaaggaaaaccagtggcctatatgccttatgctgaggtcaagagaata
gaacaggaagcacaagtgcaaaatccagccacaaggtcagcatcaccctacaggttatct
ccaagagaagtcaataaagcctctccccagcctgagatgaatgcagctcgctacagtgtc
cctccagttctccagccagcccctcaccaggtgataaccaatattcctgaaggagttcgc
ctgcccacaaccagacccaccagaccaccaccacctctcattccatcctccaaaaccagt
gtgccatcagaaaaaccttccttcatcatgggaggctcaatctcacaaggaacacctggc
acttatttaacatcccacagtcaagcttcctacgcccaagaaactgcaaagccatcagtg
ggttctatatcccttgggctgccaaggcagcaagagtcagccaaatctgcttctctgccc
tatatcaagcaagaagaattctcacccagaagccagaattcccaacctgagggactcctg
gtcagggcacaacacgaaagtgttgtgagaggtaccacaacaatacaggaggggagtata
acacgaggaactccaaccaataaagtttcagttgagaccattccttctttgagaggctcc
ataactcagggtaccccagctctggcccagcccggcatcgccgccgacacgctgctgaag
ggaaccatcacccgcctggccaccgaggacagcagccccgagaagtgcagggaggaggcc
tcagccaagggccacgtcatttatgaaggcaaaagtgggcatattctctcttatgatgct
attaaaaatgtccgtgaaggaacaaggagtcccagaactgctcatgaaattggtttaaag
agaacctatgatacaatggaaggaaatataaagcaggggatgtcactgagggagtctcca
gggtctgcaccactggaaggtttaatctgccgagcgctgcctcggggtagcccacacgct
gaactaaaggagagaacagttttgtctggctctataatgcaaggcacaccaagagcaaca
gctgaaagttttgaagaaggtttgaagtaccccaagcagatcaagagagagtcacctccc
atcaggacgtttgaaggagccatcagcaagggcaagccctacgatggggtcaccaccata
aaggagatgggtcgctccatccatgagatccccaggcaggacctcttaagccaagagagt
cgcaagactcctgaaatggtgcagacaagcaggccaatcatagaaggctccatatctcag
ggcacacccataaaatatgaaagcaactctggccagtctgccatcaaacacaatgtaaaa
tctttaatcactggaccaagcaagccccggggaatgcctcagctggaaatggtgccagaa
aacgtgaaggtggtggagcgaggaaaatacgaagatgtgaagaccggggatgccgtgcgg
tcccgtcacacgtccgtagtcagctctggtccctctgttctcaggtcaacccttcatgaa
actcccaaatcacagctgagccctgggatttatgatgatacaaatgctcggaggacacct
gtgaactatcagagtccaatgtccaggagttcacccatgatgaatagagttagtgaggct
ggagtatcttctgggaagtcagcaaatcatgaaaggaagaacacactcactccaacacag
agggagagtgtgccagcaaaatccccagtcccaggggttgatcctgtagtggctcacagt
ccttttgaccctcaccacagaggagcaactcctgaagtctacaggggtcacctccctccc
catttagatcctgctatgccatttcacagggctctggatcctgctgctgctgcttacctg
ttccaaaggcagctgtcccccacgccggggtaccccagccagtaccagctgtacgccatg
gagaacacgcgccagaccatcctcaacgactacatcacctcccagcagatgcaggtcaac
ctccggcccgacgtcaccaggggattgtcccccagggagcaaaccttggcactgccttat
gcaggagcacgaggaatcattgacctgaacaatatggcccccactatcttagtgcctcat
cctggaggaaccagcaccccacccatggagagaatcacatatatccctggcacccagctt
accttccctcccaggccttacaaccctgcttctctgtcaccaggacaccccacacacctg
gcagcttctgcagctgcaaatgctgaaagggaacgggaaagggaaagggagaaggagcgg
gaaagggagagggaacgtgaacgagagcgggaaagagaacgagaacgagagagggagaga
atcacctcagtccctgctgaactgtatctccgaccaggtgcagagcagcctggcagacct
ggcagtcacggatacgtccggtccccatccccctctgtcagaagccaggaaaacattctg
cagcaaaggccaagtatattccaaggaactaacgggacaagtgtgatcacacctttggat
cctgctgctcagctacgtatcatgcagctcacccctggagctccctctatcactcaaggc
ttgccagcttcccgttacaacactgctgctgatgccctggcagccctcgtggatgctgca
gcctctgctcctcagatggaagttgccaaatcaaaggagaacaagcacgaaggagccagg
atagaggagaacatgggccgcaggtcagctgtggtgactgaccagcagcagatggagcag
aagaccctggaggtagaaaagaggcctgtgcagtgcccctatacatctgccaattactct
ggtggcaagtcccagggacagacttcatcagtagtctattcagaggctggtaaagagaaa
ggacctcctcctaaatccaggtacgaggaagagctgagaactcgaggaaagaccacaatt
actgctgctaacttcatagatgtgatcatcactcgccagattgcttcagacaaggatgct
cgagataggggctctcaaagttcagattcttccagtagtttgtcctcacaccggtatgaa
gctcctggagatgccattgaggtgatcagccctgcaaattcacctgtacctgctcaagaa
aagctgcagccctatcaacaagagacacccaaaccaaaccaggcagagactgaccccaac
aggccgtacgagggccccattcaccgctacaggacacagcaggagcccccgtcaccccag
caacctccacctccctcttcccaggcagaggggatggcacacgtgcccaggacccatcgg
ctcatcaccctggctgatcacatctgtcaaattatcacacaagactttgctagaaaccaa
gcagcttctcaggcctctttgcagcctcccaccactacattccagaattccagccctgct
ccaactcctgcttctggccgggcaaagccctcgagccgctacagccccgaggcgcagcca
cagcccgtgcaccagcagcggccaggggccagagtgtcccctgagaacctctctgacaag
gccaggggaaggcctggaaaatctccagagaggagtcacgtcccctcagagccctacgag
ccaatctcgccacctcaggtcccggttgtccatgagaaacaggaaaatgttcttttgctt
tcccaaagaactgagcctactgaacagaggactgactctcgctctccaggcagtatcagt
tacctgccttcgtttttcaccaaacttgagaacacttcacccatggtaaaatccaagaaa
caggagatatttcgaaagctgaactcatctggtggaggtgactctgacatggcaactgct
cagccagggactgaaatattcaatttgccagcagtcactacctcaggtgcagtcagttct
aggggtcactcctttgcagatcctgccagtaatctgggtctggaagacattattaggaaa
gcactgatgggaaactttgatgacaagagtgaggagcacggggtggtcatgtcccagcct
ctctcggtggctccgggcagctccggcgccgcggtaccggcgactaacgagacacggagg
gaagaagccaatccatctccaaattcaggtggggcagtcagcaagcagaagctgatcggc
aagtcaaacagcaggaagtcaaagtctccaattcctgggcagggatatttgggaactgaa
agaccttcttctgtctcatctgtacattcagaaggggactaccacagacagactccagtg
tgggcctgggaagacaggccttcatcaacaggttccacccagtttccatacaaccctctg
accatgaggatgctgagcagcacccccccgacctccatcgcctgtgcccccccgtccatg
agccaagcaaccactcacccacagaacaggatctgggagcgagagcctgcaccactgctt
tcagcacaatatgagactctgtctgacagtgatgactga
DBGET
integrated database retrieval system
