Molothrus ater (brown-headed cowbird): 118694322
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Entry
118694322 CDS
T11569
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03030
DNA replication
mate03410
Base excision repair
mate03420
Nucleotide excision repair
mate03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118694322 (RFC2)
03410 Base excision repair
118694322 (RFC2)
03420 Nucleotide excision repair
118694322 (RFC2)
03430 Mismatch repair
118694322 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mate03032
]
118694322 (RFC2)
03036 Chromosome and associated proteins [BR:
mate03036
]
118694322 (RFC2)
03400 DNA repair and recombination proteins [BR:
mate03400
]
118694322 (RFC2)
DNA replication proteins [BR:
mate03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118694322 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
118694322 (RFC2)
Chromosome and associated proteins [BR:
mate03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118694322 (RFC2)
DNA repair and recombination proteins [BR:
mate03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118694322 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
118694322 (RFC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_lid_RFC1
nSTAND_NTPase5
AAA_14
AAA_16
RCF1-5-like_lid
Viral_helicase1
Mg_chelatase
Rad17
AAA_11
RuvB_N
AAA_assoc_2
nSTAND3
AAA_19
DNAX_ATPase_lid
AAA_24
MipZ
AAA_18
AAA_5
AAA_28
ABC_tran
AAA_25
AAA_23
AAA_30
NTPase_1
SLFN-g3_helicase
MeaB
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
118694322
NCBI-ProteinID:
XP_036251244
LinkDB
All DBs
Position
21:3433090..3643818
Genome browser
AA seq
357 aa
AA seq
DB search
MEVDMAEEEEAGPSAGDKRGPTDPAGAAPGGGGSGHYELPWVEKYRPMKLSEIVGNEDTV
SRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVR
NKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKI
IEPIQSRCAVLRYTKLTDAQILARLLKIVEKEDVAYTDDGLEAIIFTAQGDMRQALNNLQ
STYSGFGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAHLWRLGYSPEDVIG
NIFRVCKTYQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAAPAAS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggatatggcggaggaggaggaggccgggccgtcggcaggcgacaagcgggga
cccaccgaccccgccggagctgcgcccggaggcggcggcagcggccactacgagctgccc
tgggtggaaaaatacagacccatgaaactgtccgaaatagttggaaatgaagatactgtg
agcaggttggaggtctttgcaaaggaggggaatgtaccaaacattataattgctggccct
ccaggaacaggtaaaaccaccagtatcctatgtttggctcgtgctctgcttggtcctgca
ttaaaggatgctgttctggagctgaatgcctcaaatgacagaggcattgatgttgtaaga
aacaaaatcaaaatgtttgcccagcaaaaggtcacacttccaaaaggtcggcataagata
atcatccttgatgaagcagacagcatgacagatggagcacagcaagcattgagaagaaca
atggaaatttattccaaaacaacacgttttgcactggcatgcaatgcctctgacaaaatc
atagaacccattcagtctcggtgtgcagtgctgcgctacaccaagctgacagatgcacag
atacttgccaggctgctgaaaattgttgagaaagaggatgtagcatatacagatgatgga
ctagaagccattatcttcacagcccaaggtgatatgagacaggcattaaacaacttacag
tccacatactctggatttggctttataaacagtgaaaatgtctttaaggtatgtgatgag
cctcatcctctgctggtgaaggaaatgatacaacactgcataaatgcaaatattgatgaa
gcatacaagattcttgcccacctgtggcgccttggatactctccagaagatgtcattggc
aatatcttccgagtgtgtaagacctatcaaatgccagaatatctgaaactggaatttatc
aaggaaattgggtacacccacatgaagatagcagaaggtgtgaactccctgttacaaatg
gctgggctgctggcccggctgtgccagaagactgcagcccctgcagccagctag
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