Molothrus ater (brown-headed cowbird): 118694356
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Entry
118694356 CDS
T11569
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
118694356 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mate02000
]
118694356 (SLC6A4)
Transporters [BR:
mate02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
118694356 (SLC6A4)
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Motif
Pfam:
SNF
5HT_transport_N
PRONE
MPSS1_C
Motif
Other DBs
NCBI-GeneID:
118694356
NCBI-ProteinID:
XP_036251282
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Position
21:complement(7549764..7560599)
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AA seq
668 aa
AA seq
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MEKKTTSNETEPLTSKKDASDCSKGEDCKENRLVVRNPKSALRLVEDGNKVHPSQGDKGE
AAQISNGYSGVQSSAPCNGEVEDAQGTAPAATTTTTTTTSTTCGAEAQQQLMELEDRETW
SKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMALFGGIPLFYMELALGQY
HRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLISSFTAELPWTSCTN
PWNTGNCTNYFSKDNVSWSLHSISPAEEFYTRQVLQVHRSNGLEDLGGISWQLTLCLLLI
FTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKLLA
TEVWVDAAAQIFFSLGPGFGVLLAYSSYNKFHNNCYQDALVTSTVNCLTSFVSGFVIFTV
LGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTFAG
LEGVITGVLDEFPHVWGKRRELFVLGLTIVCFLGSLATLTFGGAYVVKLFEEYATGPAVL
TVVFLEAVAVSWFYGITQFCNDVKEMLGSAPGWYWRVCWVAISPLFLLFVTCSFLSSPPE
LRLFDYDYPYWTTVVGYCIGTSSIIFIPIYMIYRLVITPGTLKERILKSITPETATEIPF
GDIRMNAV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagaccacaagcaatgagacagagcccctgacttccaagaaagatgcctca
gactgtagcaaaggagaagattgtaaagagaacagacttgtggtcaggaaccctaaatct
gccctgcggctggtggaggatggcaacaaagtccacccgagccagggggataaaggggag
gcagctcagatctccaatggttattcaggggttcagagctcagctccctgcaatggagag
gtggaggatgcccagggcacggccccagcagccaccaccaccaccaccaccaccacgtcc
accacctgcggggccgaggctcagcagcagctgatggagctggaggacagggagacctgg
agcaaaaaaattgactttctcctctctgtcattggatacgcagtggatctgggaaatgtc
tggagatttccttatatctgctatcagaatggaggaggagcattcctcattccttacaca
atcatggccctctttggagggattcctctcttctatatggaattagcactaggacagtac
cacaggaatggctgtatttccatttggagaaaaatttgtcctatattcaaaggaattggc
tttgccatctgtatcatagatctttacgtagcctcctactacaacaccatcatggcttgg
gctttttactacctcatctcctccttcacggcggagctgccctggaccagctgcacaaac
ccctggaacacaggaaactgcaccaactacttcagcaaggacaatgtcagctggtccctg
cactccatctctcctgcagaagaattttatacccgccaggttctgcaggtgcacaggtcc
aatgggctggaggacctggggggcattagctggcagctgaccctctgcctgctgctcatc
ttcaccattgtgtacttcagcatctggaaaggggtcaaaacatctggcaaggtggtttgg
gtgactgccacattcccttacatcatcctcttcatcctgctcgtgagaggtgcaactttg
cctggggcttggagaggtgtcctctactacctgaaacctgactggcagaagctcctggcc
actgaggtttgggtggatgcagcagctcagatttttttctccctgggaccagggtttggg
gtcctgttggcttattccagctacaacaaattccacaacaactgctaccaagatgctctg
gtcaccagcaccgtgaactgcctgactagctttgtgtctgggtttgtcatcttcaccgtg
ctggggtacatggctgagatgaggaatgaagatgtctcagaggttgccaaagacacagga
cccagcctgctcttcatcacctacgcagaggccattgcaaacatgccagcttccaccttc
tttgccatcatcttcttcctcatgctgctcacgctgggcttggacagcacgtttgcagga
ctagagggagtgattactggagtcctggatgaattcccacatgtctggggcaaacgcagg
gaattgtttgtccttggtctgaccatcgtttgctttttggggtcgctggcaaccctgaca
tttggaggagcatatgtggtgaagctgtttgaggaatatgccacgggtccagctgtcctg
accgtcgtgttcctggaggcagtggctgtgtcctggttctatggcatcacccagttttgc
aacgatgtgaaagaaatgctgggctctgccccaggctggtactggcgagtttgctgggtt
gcaattagtccacttttccttctgttcgtcacttgcagctttctgtccagccctcctgag
ctgaggctttttgattatgattatccctactggaccacagttgtggggtactgcatagga
acctcctccatcatcttcattcccatctacatgatctatcgcttggtcatcaccccaggg
acactcaaggagcgtattctgaaaagcattactccagaaacagccacagaaattcccttc
ggagacatccgcatgaacgcagtataa
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