Molothrus ater (brown-headed cowbird): 118694382
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Entry
118694382 CDS
T11569
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118694382 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mate04131
]
118694382 (SCARF1)
Membrane trafficking [BR:
mate04131
]
Endocytosis
Phagocytosis
Scavenger receptors
118694382 (SCARF1)
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Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_PEAR1L
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
118694382
NCBI-ProteinID:
XP_036251318
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All DBs
Position
21:complement(6522249..6528177)
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AA seq
872 aa
AA seq
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MESARPILCLQLWLWVQSSAQELDPEGRNVCRFPAGPECCPGWRQEGRACTVAVCEGEDA
CREGEVCVKPGLCRCPPGFFGADCSSRCPEQYWGHDCKRSCPCHPNGRCDPASGHCTCDP
SHWGGLCQFPCQCGPHGRCDPLTGACHCEPGWWAPNCRKQCQCNPSTSQCDPLSGLCRCQ
PGWWGRRCSFKCSCNVSPCAQETGKCECLAGYWGPACQRRCDCGHGSCSPASGHCTCEPG
YQGRSCREPCPAGKYGSQCVHSCGSCKHSQPCSPVNGFCLACQPGWTGTLCKDPCAPGFH
GDGCLQPCPRCQHGEPCDPQTGSCLRCDPGWTGPSCNSSCPVGTFGDGCQFLCPECVSGS
CDPVTGVCICQAGYWGDSCNDTCPEGYFGVNCSSPCQCSRGTCDPVQGDCVLSLKDHGAL
AAAILVPLLLVLLCVACCCCGAGSADARDRAAVPDDDVLARMKHHVQGVLANLSALMPCF
NLGTSKLPKVTVSHHDMEIPYNPSFIEPPSSAWVSDSSFSSFDTDNEGPEYSVPPREGIP
LLGGAELQDGASPAGEALPDPSAFDSEDVSQPFAIPRTSSIAKAKRPSVSFAEGTKFGAA
ETPSPSRKPKAPWGPSRLTPPPGDAAAESPGESPASDCYENAEPLSKGDESHRPSPRATP
GGRRRVVSSTRHVAQRVEALEAAARCGSWEAKGKEPNVTTIYMMVGTAGQDPKAEGTGEG
PVQAVLKRLGSLQKGKWAAKEEPKVRRSMEAIQKPPRRALAQRRDSENSCKQRESVPGAP
AEPAPGKQQHPAAKRLSLLLASLSPKSTGAQDGASETAGAAEKGKSPELVGSLERKGRDA
AEEEPKYENVASSGADSPSGPGKELPGSAPGT
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgcccggcccatcctctgcctgcagctgtggctgtgggtgcagagctctgcc
caggagctcgaccctgagggcaggaacgtctgcaggttcccggccggcccggagtgctgt
cccggctggaggcaggaggggagggcgtgcacggtcgctgtgtgcgagggggaggacgcc
tgcagagagggcgaggtgtgcgtgaaacctgggctgtgccgctgcccacccggcttcttc
ggagcagactgcagctcccgctgccccgagcagtactggggccacgactgcaagcggagc
tgcccgtgccaccccaacgggcgctgcgaccccgccagcggccactgcacctgcgacccc
agccactggggcgggctctgccagttcccctgccagtgcggcccccacggccgctgcgac
cccctgaccggcgcctgccactgcgagccgggctggtgggcacccaactgcaggaagcaa
tgccagtgcaacccctccacctcgcagtgcgaccccctgagcgggctgtgccgctgccag
ccgggctggtggggcaggaggtgcagcttcaagtgctcctgcaacgtgtcgccctgcgcg
caggagacgggcaagtgcgagtgcctggctggctactggggaccggcgtgccagcggcgc
tgcgactgcgggcacggctcctgcagtcccgccagcggccactgcacctgcgagcccggc
taccagggcaggagctgccgggagccctgcccggcagggaaatacggatctcagtgcgtg
cacagctgtgggagctgcaagcacagccagccctgctcacccgtgaatggtttctgcctg
gcctgccagcccggctggaccgggaccctctgcaaggatccctgtgctcctggattccat
ggggatggctgcctccagccatgtccccgctgccagcacggggagccctgtgacccccag
actgggtcctgcctgcgctgtgaccctggctggacaggacccagctgcaacagctcctgc
cccgtgggcacctttggtgatggctgccagttcctctgccctgagtgtgtttcagggagc
tgtgaccccgtgacaggagtttgcatctgccaggcaggctactggggagacagctgcaac
gacacctgtcccgagggctattttggagtgaattgttcctcaccctgccagtgctcccgg
gggacctgtgaccctgtgcagggtgactgtgtgctgagtttgaaggaccacggagccctt
gcagctgccatccttgtccctctcctgctggtgctgctctgtgtcgcctgctgctgctgt
ggtgctggctcagcagatgccagagacagggcggctgtgccagatgatgatgtgctggcc
aggatgaagcaccacgtgcagggggtgctggccaacctcagtgctctcatgccctgcttt
aacctgggcacctcaaaacttcccaaagtcacagtttcccaccacgacatggaaatcccc
tacaaccccagcttcatcgagcccccatcgtctgcgtgggtttcagacagctccttctcc
tccttcgacaccgacaacgagggacccgagtactccgtccctcccagagaaggcatcccg
ttgctgggcggggctgagctgcaggacggagcatcccccgctggcgaggcgctcccggac
ccgtccgccttcgactccgaggatgtctcgcagcccttcgccatcccccgcacctccagc
atcgccaaggccaagcgaccctctgtgtccttcgccgaggggacaaaattcggggctgcc
gagacgcccagccccagccggaagcccaaggctccgtggggcccatccaggctgacccca
ccgccgggggatgcggcggccgagtcgcccggcgagagcccggccagcgattgctacgag
aacgccgagcccctcagcaagggggacgaaagccaccggccatcgcctcgggccacgccg
gggggacgccgcagggtggtgtccagcaccaggcatgtggcccagagagtggaggcgctg
gaagcagctgcgagatgcggcagctgggaggccaaggggaaggagcccaatgtcaccacc
atctacatgatggtgggaacagccgggcaggaccccaaggcggaggggactggtgaggga
ccggtccaggctgtgctgaagcgtctgggcagcttgcagaagggcaagtgggctgcgaag
gaagagcccaaggtgaggaggagcatggaggccatccagaaacctcctcgccgggctctg
gcgcagcgcagggactcggagaacagctgcaagcagagggagagtgtgccgggggctcct
gccgagccagccccgggcaagcagcagcatcccgctgccaagagactgtccctcctcctc
gcatctctctcgccaaaaagcaccggtgcccaggacggggccagcgaaaccgcaggtgcc
gcagagaagggaaaaagcccggagttagttggcagcctggaaaggaagggacgggatgcc
gcggaggaagagccgaagtacgagaacgtggccagcagcggtgctgattcgccctccggc
cccggcaaggagctgccgggcagcgctccgggcacctga
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