Molothrus ater (brown-headed cowbird): 118694835
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Entry
118694835 CDS
T11569
Symbol
YBX1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mate03000
]
118694835 (YBX1)
03019 Messenger RNA biogenesis [BR:
mate03019
]
118694835 (YBX1)
03041 Spliceosome [BR:
mate03041
]
118694835 (YBX1)
Transcription factors [BR:
mate03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
118694835 (YBX1)
Messenger RNA biogenesis [BR:
mate03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
118694835 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
118694835 (YBX1)
Spliceosome [BR:
mate03041
]
Common components
Common spliceosomal components
General mRNP proteins
118694835 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
118694835
NCBI-ProteinID:
XP_036251974
LinkDB
All DBs
Position
23:complement(8057182..8066545)
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AA seq
324 aa
AA seq
DB search
MSSEAETQPPAAPVPAAAPAAPADSKPNGGTGNGGSGLASAAPPAGGDKKVIATKVLGTV
KWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAA
NVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGGENIPEGQAQ
QRRPYRRRRYPPYYMRRPYGRRPQYTNPPVQGEIVEGADNQGAGDGRPVRQNMYRGYRPR
FRSLTFRGPPRQRQPREDGNEEDKENQGDETQSQQPPQRRYRRNFNYRRRRPENPKPQDG
KETKTAEPPAENTSAPEAEQGGAE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccagccgcccgccgcccccgtccccgcggcggcccccgcc
gcccccgccgactccaagccaaacggtgggaccgggaacgggggcagcggcctggcctcg
gcggcgcctcccgctggcggggacaagaaggtcatcgcaacgaaggttttgggaacagtg
aaatggttcaacgtgaggaacggttacggcttcatcaacaggaatgacaccaaggaagat
gtgtttgtccatcagactgccataaagaagaataaccccaggaagtacctccgcagcgta
ggagatggagagaccgtggagtttgatgtggttgagggagaaaagggtgcggaggcagcc
aatgtcacaggacctggtggagttccagtgcagggcagtaaatacgcagcagatcgtaac
cattacagacgatatccacgtcgtaggggtcctccacgcaactatcagcagaactaccag
aacagtgagagtggggaaaagaatgaaggaggagagaacataccagaaggccaagcccag
caacgccgtccctatcgcaggcggcggtacccaccttactatatgcgtaggccctacggg
cgtcgtccacaatacaccaaccctcccgtacagggagagatagtggagggtgctgacaac
cagggtgcaggagatggcagaccagtcaggcaaaacatgtaccggggttacagaccaaga
tttcgcagcttgactttcaggggtcctcctcgtcaaagacagcctagagaggatggaaat
gaagaagataaagagaaccaaggggatgaaacccaaagtcagcagccacctcaacgtcgg
taccgccgtaatttcaactaccgacgcagacgcccagagaaccctaaaccacaagatggc
aaagagacgaagacagccgaaccaccagctgagaacacgtccgctcccgaggctgagcag
ggcggggctgagtaa
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integrated database retrieval system
