Molothrus ater (brown-headed cowbird): 118694885
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Entry
118694885 CDS
T11569
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03013
Nucleocytoplasmic transport
mate03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118694885
03015 mRNA surveillance pathway
118694885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mate03019
]
118694885
Enzymes [BR:
mate01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118694885
Messenger RNA biogenesis [BR:
mate03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118694885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
118694885
NCBI-ProteinID:
XP_036252086
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All DBs
Position
23:complement(7088641..7101090)
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AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSTLHLKDEKTKPDANGAVVKADDNVEKTEDEEKEDRAAQS
LLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGK
VIEQMGNFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNRDEKFRALCNIYGAITIAQAMIFCHTRKTAGWLAAELSREGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKINKLDTDDLDEIEKINN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggccgtggacgagcaggaggcggcggccgagtcgttg
agcactttacacctgaaggatgaaaaaaccaaaccagatgccaatggtgccgttgtcaag
gcagatgacaatgtggagaagacagaggatgaggagaaggaggacagagctgcccagtcc
ttactgaacaagctgatccgcagtaacctggttgacaccacaaatcaggtggaggtgctg
cagagggaccccacatcacccctctactctgtgaagtctttcgaggagctgcgcctgaaa
ccacagctcctgcagggagtctatgccatgggcttcaacagaccatctaagatccaagag
aatgccctgcccatgatgcttgctgaacccccgcagaacctcatcgcgcagtcgcagtcc
gggaccggcaagacagctgccttcgtgctggccatgctcagcagggtcgagcctgggaac
aagtatccacagtgtttgtgcctttccccaacatacgagctggcacttcaaacaggaaaa
gtgattgaacagatgggaaacttctacccggagctgaaacttgcgtatgctgtccgaggc
aacaaactggagagagggcagaagatctcggagcagatcgtaatcggtacgcccggcacc
gtgctggactggtgttccaaactgaagttcatcgatcccaagaagatcaaagtgtttgtg
ttggatgaggcagatgtgatgatcgccacccagggccaccaggaccagagcatccgcatt
cagagaatgctccccagggactgccagatgctcctgttttcagccacttttgaggattct
gtgtggaagtttgctcaaaaagttgttcctgacccaaacattatcaaactgaagcgtgag
gaggagaccctggacaccatcaagcagtattatgtcctgtgcaataacagagatgagaag
ttccgggctctctgtaacatctacggggccatcaccatcgcccaggccatgatcttctgc
catacccggaagacggcggggtggctggcggccgagctgtccagggagggccatcaggtg
gccttgctcagcggggagatgatggtggagcagagagcggccgtcatcgagcgcttccgg
gagggcaaggagaaggtgctggtgaccacaaacgtctgtgccagagggattgatgtcgag
caggtgtctgttgttatcaattttgacctgcctgtggataaggatggcaatccagacaac
gagacctacctgcaccgcatcggccgcaccggccgcttcggcaagcgagggctggccatt
aacatggtggacagcaagcacagcatgaacatcctcaacagaatccaggaacatttcaac
aaaaagataaacaaattggatactgatgacttggatgaaattgagaagataaataactga
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