Molothrus ater (brown-headed cowbird): 118695053
Help
Entry
118695053 CDS
T11569
Symbol
PRDM16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
mate
Molothrus ater (brown-headed cowbird)
Pathway
mate00310
Lysine degradation
mate01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118695053 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mate03000
]
118695053 (PRDM16)
03036 Chromosome and associated proteins [BR:
mate03036
]
118695053 (PRDM16)
Enzymes [BR:
mate01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
118695053 (PRDM16)
Transcription factors [BR:
mate03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118695053 (PRDM16)
Chromosome and associated proteins [BR:
mate03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118695053 (PRDM16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_11
SET
zf-met
zf-H2C2_5
Zap1_zf1
zf-BED
C2CH-4th_BIRD-IDD
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
118695053
NCBI-ProteinID:
XP_036252330
LinkDB
All DBs
Position
23:2889657..3198227
Genome browser
AA seq
1265 aa
AA seq
DB search
MRSKARARKLPKSDSEIVNNMYETDPDLLAGESAEEETEDSIMSPIPVGPPSPFPTSEDF
TPKEGSPYEAPVYIPDDIPIPPDFELRESSIPGAGLGIWAKKKIEVGERFGPYMAVQRST
LKETNFGWEQILTDPEVTSQEGNIKKIPDALGTEKFCGDAGQGGAGNWLKYIRVCCSCDE
QNLAVCHINEQVYYKVIKEIEPGEELLVCLKEGGYSLGNMAPSMEEEPSFRCEDCDELFQ
SKLDLRRHKKYGCGAVGALYESLSDDIKQEGLGDGQVYECKDCERMFPNKYSLEQHMVIH
TEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVGA
RAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQI
KCKDCGQMFSTTSSLNKHRRFCEGKNHYSPAGIFAPGLPLTPTSIMDKSKPSPNLNHASL
GFNEYFPSRPHPGGLPFSPAPPAFPALTPGFPGIFPPSLYPRPPLLPPTQLLKSPLNHTP
DAKLPSPLGNPALPLISAVSNSNQAPSGEEKCESSLENSYLEKLKARNSDMSDGSDFEDV
NTTTGTDLDTTTGTGSDLDSDAESDRDKTKDKSKQMETKPDFVSSSVSASSTNTTSEIPL
FYSQHSFFPPPEEHLLPTTGAANDSIKAIASIAEKYFGPGFMGMQEKKMGSLPYHSMFPF
QFLPNFPHSLYPFTERTLNHNLLVKAEPKSPRDLHKVGGTSSESPFDLTTKPKEIKPILP
PPKVLPAPSSGEEQPLDLSIGNRIRASQNGGREPRKNHIYGERKLMASEVLPKISQSQLP
QQPSLHYAKPSPFFMDPIYRVEKRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLE
SFAAMKADSGSSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRH
LRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKK
HEHENVPVSQHSGVITNHLGTSASSPNSESDNHALLDEKEDSYFSEIRNFIANSEMNQAS
ALADKRPEIQDIDGNSQCHGLANEKAEDVDDEDEELEEEDDDSLTGKSQDETASPTAEPR
GAFEDEEDEEPTSLTMSFDHTRRCVEEDEAGLLDLEQMPNFGKGLDLRKAAEEAFEVKDV
FNSTLDSEAIKQTLYRQAKNQAYAMMLSLSENAPLHTSSQSSLGAWLDMAGAASESGTFN
PINHL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactgcccaaaagtgacagcgagattgtaaataat
atgtacgagaccgaccccgatctccttgctggagaaagcgcagaggaggaaactgaggac
agtataatgtcccccatccctgtgggacctccgtcacccttccccaccagtgaggacttc
actcccaaggagggctcaccctatgaagctcccgtctacattcctgatgacattccaatc
ccaccagattttgaactcagagaatcttcgatcccaggggcagggctagggatttgggcc
aaaaagaagattgaagttggggaaagatttggaccctatatggcagtacagaggagcaca
ttaaaggaaacaaactttggatgggagcaaatactgactgatcccgaggtgacctcccaa
gagggcaatataaaaaagattcccgatgccctgggcactgagaagttctgtggtgatgcc
ggccagggcggggctgggaactggctgaagtacatccgagtgtgctgctcctgcgacgag
cagaacctggctgtgtgccacatcaacgagcaggtctattataaagttattaaagagatt
gagccgggggaagagctcctggtgtgcctgaaggaaggaggttattccctggggaacatg
gcacccagcatggaagaggagccctcgttccgctgtgaggactgcgatgagctgttccag
tccaagctggacctgcggcgccacaagaagtacggctgtggggccgtgggggccctctac
gagagcctcagcgacgacatcaagcaggaaggtcttggagatggacaggtctacgagtgc
aaggactgtgagaggatgttccccaacaaatacagcctggagcagcacatggtgatccac
accgaggagagggagtacaagtgtgaccagtgccccaaggctttcaactggaaatccaac
ctgattcgtcaccaaatgtctcacgacagtgggaaacggtttgaatgtgaaaactgtgtt
aaggtgtttacggaccccagcaacctccagcggcacatccgctcgcagcacgtgggcgcg
cgggcccacgcctgccccgactgcggcaagaccttcgccacctcctcgggcctcaagcag
cacaagcacatccacagcactgtcaaacctttcatatgtgaggtctgtcacaaatcctac
acgcagttctccaacctgtgccgccacaagcggatgcacgcggactgccgcacccagatc
aagtgcaaggactgcgggcagatgttcagcactacctcctccctcaacaagcaccggcgc
ttctgcgagggcaagaaccattacagccccgccggcatcttcgcccccggcctccccctc
acgcccacctccatcatggacaaatccaagccctctcccaacctcaaccacgccagcctg
ggctttaatgagtatttcccgtcccgcccgcaccccggcgggctcccgttctcgccagca
cctccagcattccctgccctcaccccgggattcccggggatttttccaccttctctgtac
cccaggccccccttgttaccgcccacgcagctgctcaaaagtcccctcaaccacactccg
gacgcgaagctccccagccccctcgggaacccggcgttgcccctgatctctgcagtgagc
aacagcaaccaggctccttcaggggaggagaaatgtgaaagcagcctggaaaactcctac
ctggagaagctaaaagccaggaacagtgacatgtccgatggcagtgactttgaggatgtc
aatacgaccacgggcacggatctggacaccacgaccggcactggctctgacctggacagt
gacgcagagagtgacagggacaaaacgaaagacaagagcaaacaaatggagaccaagcca
gattttgtcagcagctcggtgtctgccagctccaccaacaccacgagcgagatccctctc
ttctattctcagcattccttctttcctccccccgaggagcacctgctgcccaccacgggc
gctgccaatgactccattaaagctatcgcctccatcgcagagaagtattttgggcctggc
tttatgggcatgcaggagaaaaagatgggttcgctcccgtatcattccatgttccccttc
cagttcctccccaatttcccccactccctctaccctttcacggagcggaccctcaatcac
aacttgctggtcaaggcagaaccaaagtcacccagggacctccacaaagtcggtggcacc
agctcggagtcccccttcgatctcaccacgaagccaaaagagattaagccaatcctgccg
ccccccaaggtcctcccagccccgtcctcaggggaggagcagccactggacctgagcatt
ggcaaccgcatccgagccagccagaacggagggagagagccacggaaaaaccacatttat
ggggagaggaagctgatggcaagtgaggtcttacctaagatttcccagtcccagctgcct
cagcagccttccctgcactacgctaagccatcgccctttttcatggaccccatctacagg
gtggagaagcggaaggtgacagaccccgtgggtgccctcaaggagaagtacctgcgaccc
tccccgctgctttttcacccccagatgtcagccatcgagacgatgacagagaaactggag
agctttgcagccatgaaggcagactctggctcgtccctgcagccccttccccaccacccc
ttcaacttccgatcgccgccgccaacgctctccgaccccatcctgcgcaagggcaaggag
cgctacacctgcaggtactgtggcaagatcttcccacgctcggccaacctgacgaggcac
ctgcggacacacactggggagcagccttacaggtgtaaatactgtgacaggtcattcagc
atttcctccaacctgcagaggcacgtcaggaacatccacaacaaggagaagccattcaag
tgccacctgtgcaacaggtgctttgggcagcagaccaacctcgacaggcacctgaagaag
cacgagcatgaaaacgttccagtgagccagcactccggagtcatcaccaaccacctcggg
accagcgcctcctcccccaactcggaatcagacaaccatgcacttttagacgaaaaagag
gattcctatttctcagaaatcaggaactttattgccaacagcgagatgaatcaggcgtcg
gctttagcagataaaaggccagaaatccaggatattgatggcaattcccagtgccacgga
ctggcaaacgagaaggcagaagatgtggacgatgaggacgaagaactggaagaggaagat
gatgacagcctgactgggaagtcccaggacgagacagcgtcgcccacggcggagccccgg
ggagcgtttgaggatgaggaggacgaggagcccacgtctctcaccatgagctttgaccac
acccgaaggtgtgttgaggaggacgaagccggcctgttagatttggagcagatgccgaat
tttgggaaggggctggatctccgcaaagcggccgaggaagcctttgaagttaaagatgtg
tttaattccaccttagactctgaggcaataaaacagactctgtacaggcaggctaaaaac
caggcttatgcaatgatgctgtccctgtctgagaacgctcccctccacacgtcctcccag
agctctctgggggcttggctggacatggcaggagcagcttcagagtcggggacctttaac
cccatcaaccacctctga
DBGET
integrated database retrieval system
