Molothrus ater (brown-headed cowbird): 118695389
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Entry
118695389 CDS
T11569
Symbol
AHDC1
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor Gibbin
KO
K22592
AT-hook DNA-binding motif-containing protein 1
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mate03036
]
118695389 (AHDC1)
Chromosome and associated proteins [BR:
mate03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118695389 (AHDC1)
SSDB
Ortholog
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GFIT
Motif
Pfam:
DUF4683
Motif
Other DBs
NCBI-GeneID:
118695389
NCBI-ProteinID:
XP_054373160
UniProt:
A0A7L3V8L3
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All DBs
Position
24:complement(7014204..7064642)
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AA seq
1644 aa
AA seq
DB search
MRVKPPGPVVTTSVVRGSPDYVREPKFYPPGHPVQRPPACPAEKALSCSVLSFPEGSCPA
LGREHQAGSLLHGDPADRCQSVHGGTKAAEDLLGCAGEPRILGGSTEEASARDRAPKTFP
NATLASGRCNVDGILALLRSKCGNGHINLHPVVQLIDIMKDLNRLSEDLKNSGVHLDCGS
LRGGGGAHEDSRLLPADRDLQYSFFSSPSLANSIRSPEERGVLLKSDPSRHPRPPARDGE
AEGGGGSTPQPPGHAVGVGDVSKAPADEAGCSQPDASDYSELAEADILNELASLACPGTQ
LLESQAMEPQPQLLPAQELDSQSRLLDSQSLESQPQLLDSQSLEPLPESLELQNLEPLGL
QSLEPLSESLELQSLEPLSESLELQSLEPLAEPLGLQTLEPLPGALEPPLLPTEPSLLEP
QPLGTVSELLEAQPGTGDPLRPHGLQPRLGGCPLSTMVKRGPCGGRGAGRCGEDHRKYAL
RRTDKPKMLCRRRRAGRGRRVDITPESHVLSPLTLPAELPPGPEEPDTPVLSPPPPPPPT
TLDPNEMPKAPTAGKKSKCRGVRKMVVKMAKIPVSLGRRNKTTYKVSSLSSNLNLEGKEL
AASSSMEPTPLLKMKNNGRNVVVVFPPGEMPIILKRKRGRPPKNLLLGQAKPKEPTPEVK
KRRRRKQKLASPQPSYIADTNDSKADYSDVLAKLAFLNRQSQCSGRCSPPRCWTPSEPES
IHQAPDTQSISHFLHRVQGFRRRGGKAGGFGGRGGSHAARAARCSFSDFFEGIGKKKKAP
TALHADPVHPRKRGRLEPDPVGKPKRKRRARKNGALFPEPNSGQSFGDGPAAEWGGGEKG
SPWAPHHSHPGGQPGRNGGYQGAEARPFHAAGLESGSSGRAGFYAGSAPSSQTETGPERH
SLFTGYFRSLLDSDDSSDLLDFALSASRSESRKSAAAYTAPPAALPGQRGMAAYTARGGK
VPAANPGAEAFHAAMQGRPAFPPGRASSAYGVTQGSSECRGTESFPKLAPPSAVSRSPTA
HPAASGTPGYSPYGSYGSAGQSVAPASVFPPGKQYPSAQDCPNSKDCSFAYGSGSSLPSS
PSSAHSAGYAPPTAGPSLPLGKAAFFNSAEQGGQFSSAAHTPLRCDSRASTVSPGGYMVP
KGSASFQPSPENCRQFPSSAPWAFRQGYGGLDWSSEAFSQLYNPGFECHLNEPNVILDIS
NYTPQKAKQQTVSETFSESSSDSTQFNQPAGYRRANSEASSSEGQSSLSSLEKLMMDWNE
ASSAPGYNWNQSVLFQSNSKPGRGRRKKVDMFDTSHLSFSSSSSSSSVYPSKRNTGPRQP
RGSRGACASKKERGTGKAKFPTKSQAVNPLFQDSTDLGLDYYSGDSSMSPLPSQSRGFGV
GERDPCDYTGPYSMNPSTPSDGTFVQGFQSDSPGLGQPDLESKHFPALPHQLAAPGQQTV
FEAGLQKAFSPNCSPTLAFKEDLRAGSMRKLPACDSLKHSMQGGALPHAPHLACRDLPMP
QAHYDSPSCKNPPYWYSPNASTRSPSYDGKAGAGMLVDFMGRTDPPCLNPHLSSPSSTHP
SKGEKEPLEMSRAHHRGPYACPLINDLNISPVPRDSMLQLQDNYRYPSFAPQGHPVMAPS
QKSGFLGPMVEQQHPEDTFTVTSL
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgaagcccccgggcccagtggtaacgaccagcgttgtgcgtggctcgcccgac
tacgtccgagagcccaaattctacccgccgggacacccggtgcagcggccccccgcctgc
ccggccgagaaggcgctgtcctgcagtgtgctcagcttccctgaggggtcgtgccccgcg
ctcggccgggagcaccaggcaggctcgctgctgcacggcgacccggccgaccgctgccag
agcgtccacgggggcaccaaggcggccgaggacctgctgggctgcgccggggagccccgg
atcctggggggcagcacagaggaggcatctgcccgcgaccgggcgcccaaaaccttcccc
aacgcgacgctggcctcgggccgctgcaacgtagacggcatcctcgccttgctccgcagc
aagtgcggcaacgggcacatcaacctccaccctgtggtgcagctcatcgacatcatgaag
gacctcaaccgcctctctgaggacctcaagaacagcggggtgcacctggactgtggcagc
ctccgtggcggcggtggggctcacgaggacagccgcctcctgcccgctgaccgggacctc
cagtacagcttcttctcctcgccctccctggccaacagcatccgcagccccgaggagcgg
ggggtgctcctcaaatccgacccgtcgcggcatccccggcccccagcgcgtgacggagag
gctgagggaggcggggggagcaccccacagcccccaggacacgctgtgggtgtgggggac
gtctccaaagctccggcggatgaagccggctgctcccagcccgatgccagcgattactcg
gaactggccgaggcggacatcctgaacgagctggcctccctggcttgcccagggacgcag
ctgctggagtcgcaggcgatggagccgcagccccagttgctgccagcccaagagctggac
tcccaatcccggctgttggattcccagtccctggagtcacagccccagctgcttgattcg
cagagcctggagccgctgccagagtcgctggagctgcaaaacctggagccgttggggctg
cagtcgctggagccgctctctgagtctctggagctgcagtcgctggagcctctgtccgag
tcgctggagctgcagtcactggagccattggcggagcctctggggctgcagaccctggag
ccactgcccggagcgctggagcccccgctgctgcccactgagccctctctgctggagcca
cagccactgggcaccgtctcggagctgctggaggcgcagccgggcaccggggaccctctg
cggccccacgggctgcagccccggctcggggggtgtcccctgagcaccatggtgaagcgg
ggcccctgcgggggccggggggccgggcggtgtggcgaagaccaccgcaagtacgccctg
cgccggactgataagccaaagatgctgtgccgccggaggagggcggggcgagggcgccgg
gtggacatcacccccgagagccacgtcctgtcccccctcaccctgcccgccgagctgccc
cccgggcccgaggagcctgacaccccggtgctgagccccccaccgccaccgcctcccacc
acgctggaccccaacgagatgcccaaagcccccacggcagggaagaagagcaagtgccgg
ggggtgaggaagatggtggtgaagatggccaagatccccgtgtccctggggagaaggaac
aagaccacctacaaggtgtcatcgctcagcagcaacctgaacctggaggggaaggagctg
gcagccagcagctccatggagcccacgccgctgctcaagatgaagaacaacgggcgcaac
gtggtcgtggtgttccctcctggcgagatgcccattatcctgaagcgcaagcggggccgg
cctcccaaaaacctgctgctgggccaggccaagcccaaggagcccaccccagaagtgaag
aagaggaggaggaggaagcagaagctggcctcgccccagccctcctacatcgccgacacc
aacgacagcaaagccgactactcggatgtgttggccaagctggccttcctgaaccgacag
agccagtgctcggggcgctgctcaccgccccgctgctggacccccagcgagcccgagtcc
atccaccaagcccccgacacccagagcatctcccacttcctgcaccgggtccagggtttc
cgccggcgcggcggcaaggcggggggcttcggtgggcgtgggggcagccacgccgcccgc
gccgcacgctgctccttcagcgatttctttgagggcatcgggaagaagaagaaagccccc
acggccctccacgctgaccccgtgcacccccgcaagcgcggccggctggagcccgacccc
gtgggcaagcccaagcggaagcgacgggcgcgcaagaacggggccctgttccccgaaccc
aactccgggcagagcttcggggacggccccgccgcagagtggggcgggggcgagaagggc
agcccctgggccccccaccacagccaccccggcggccagcctggacgcaacggtggctac
caaggggccgaggcgagacccttccacgccgcggggttggagtcgggctcctctggccgt
gccggtttctacgctggcagcgcgccgtcctcgcagacagagaccggtccggagcggcac
agcctcttcaccggctacttccgctccttgctggactccgatgactcctccgacctgctg
gacttcgccctctccgcgtcccgctccgagtcccgtaaatcggcggccgcctacacggcg
cccccggccgcgctgcccggccagcggggcatggctgcctacacggcccgcggcggcaaa
gtgccggcggccaaccccggtgccgaggccttccacgcggccatgcagggccggccagcg
ttcccgcccggccgcgcctccagcgcctacggggtgacccaaggctcctccgagtgccgg
ggcaccgagtccttccccaaactggccccgccatcagccgtgtcccggtcgcccacggct
cacccggcggccagcggcacccccggctactccccatacggcagctacggcagcgccggg
cagagcgtggcacccgccagcgtgttcccgccaggaaagcagtacccatcagcacaggac
tgccccaacagcaaggactgcagcttcgcctatggcagcggcagcagcctcccgtcctcg
cccagcagtgcccacagtgccggctacgcgccaccgacagctggtcccagtttgccgctg
ggaaaagctgccttcttcaacagtgccgagcagggggggcagttctccagcgccgcgcac
acccccctgcgctgcgacagccgggccagcaccgtctcgcccggcggctacatggtgccc
aaggggtcagcgtccttccagccctcgcctgaaaactgccggcagttccccagctccgcg
ccgtgggccttccggcagggctacggagggttggactggagctcagaagccttcagccag
ctctacaacccgggcttcgagtgccacctcaatgaacccaacgtcatcctggacatctcc
aactacaccccgcagaaagccaagcagcagacggtctctgagaccttctcggagtcctcc
tctgacagcacccagttcaaccagccggctggttaccggcgcgccaacagcgaggcgtcc
tccagcgagggccagtccagcctctccagcctggagaagctgatgatggactggaatgag
gcatcctccgcccctggctacaactggaaccagagcgtcctcttccagagtaactccaag
cccggtcgaggccgacggaagaaggtggatatgttcgacacctcccacctgagtttctcc
tcctcttcctcatcttcctccgtgtacccctccaagaggaacacgggaccccggcagccc
cggggctcccgaggggcttgtgcctccaagaaggagagggggacgggcaaagccaagttc
cccaccaagtcacaggcggtgaaccccctgttccaggacagcacggacctgggcttggac
tactacagcggggacagcagcatgtcccccctgccctcccagtcccggggcttcggggtg
ggggagcgggacccctgtgactacaccggcccctactccatgaacccctccaccccctcg
gatgggacctttgtccaggggttccagagcgactcccccggtttggggcagccggatttg
gagagcaagcacttccctgccctcccgcaccagctggcagcccccggccagcagactgtg
ttcgaggccggtttgcagaaagccttctcgcccaactgctccccgaccttggccttcaag
gaggacctgcgggcaggcagcatgcggaagctgcccgcctgcgactcgctcaaacacagc
atgcaggggggggccctgccacacgccccacacctggcctgccgcgacctccccatgcct
caagcgcactatgactcccccagctgcaaaaaccccccgtactggtattcccccaacgcc
agcacccgcagcccttcctacgacggcaaggcgggggctggcatgctggtagacttcatg
ggcaggacggaccccccgtgtctgaacccccacttgagcagcccgagcagcacccacccc
tccaagggcgagaaggagcccttggagatgtcccgggcccaccaccgaggaccctacgct
tgtcccttgatcaatgacttgaacatctcccccgtaccgagagactcaatgttgcagctg
caggacaactacaggtaccccagttttgcaccccaagggcaccccgtcatggcccccagc
cagaagagcgggtttttgggacccatggtagagcaacaacaccctgaggacacttttacg
gtcacctcattgtag
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integrated database retrieval system
