Molothrus ater (brown-headed cowbird): 118695408
Help
Entry
118695408 CDS
T11569
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03013
Nucleocytoplasmic transport
mate03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118695408 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118695408 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mate03019
]
118695408 (NUP153)
Messenger RNA biogenesis [BR:
mate03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118695408 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Phage_cap_P2
Motif
Other DBs
NCBI-GeneID:
118695408
NCBI-ProteinID:
XP_036252849
LinkDB
All DBs
Position
1:complement(64702453..64746756)
Genome browser
AA seq
1451 aa
AA seq
DB search
MASGGGGGGGGGKIRTRRHHLGAAKPPYARGKQQLGLLSRVTESVKNIVPGWLQKYFNKR
EDKCVDMNESANEEENPVNYHHDYANEDAMVIDGRVTPESARINLEEPSTSRSALNFSDV
LTRPSLHRSHLNCTVLDSTVPHCQPSTSSTLGIGSPGLSLVKEIKDSTSQHDDDNISTTS
GFSSRASDKDITVSKNTSAPLLWSPEAERSHSLSQHPASSSKKPAFNLSAFGSPSPSLGN
TSVFKTRQLGDSPFYPGKTSYGGAAAAARQTKVQISAYQPPIKRQMKAKQANVQSYGVTS
STARRILQTLEKMSSPLADAKRIPSSVSSPLSSPGDRSVLNMTSFQSRQNQVDSQHPPVQ
KLVTPKPISLTGSRITYFKPSLKSATNSRKIHQRVDTDHQDMMEESFPAEKPVKSSESNL
SYPKLDTPASNGLSSGGRMDSACGKMRRERERYCASRPGQKQQLEMEQEELPEVPLPIST
ASLPTFNFSFPASSAVSSSPSIISKAVMNKVQPASNVGSPTFVFSSPIVKSTEVEVLPPS
SQIKFTFSVPVVKSSELSRSTDTPVTSILSPGSATVNSTSNKKEEEEEYDGFCKPAKFLK
QGSVLDILKSPGFMSGKSPSCSSAQPVTSTVVYTRPAISSFSAAKDTSKQASSFWQSDTH
DQCLQNKTTDGKCVTCEAAKVSTAESTKQTVSVSPCVSSKTAVPTVGTLGFEDKFKQAPN
MWDCDTCLVQNKPEATKCIACETPKPGTGVMPALTMPMVTDNSVTVTSTSSSTGTTVTLG
FGDKFKPPKGSWNCSVCLLQNKAEDSKCVSCQSEKPGSSVPVTSSSVSASSGGFLDLDKF
KMPEGSWECETCLVQNKAEATKCIACGSVKPGTKAELKGFGTATVSTNAAMPSFTFGVPS
SSSESSQTLSSTGNFKFGEQSSFKFGIASESASSNTVTGGFKFPTGSGNFKFGVSSSDSK
SEDSKNESKSNSFTFGLPSTSSQAPSTFQFGTTSLGQQEKKEEPVLGGFGFATSSTSSIA
TNENKTGVSGFTFGTVAEKDAASPALPFKKSDEKKDETASTKGGFSFGSVESAPASQFVL
GRAEEKQDSVTSAGPLAFGKKADNEELKPQPIFSSGTAENTKEENTAKPVFNFSFGKPSE
KESEQAKAPFAFGAPASTSDQGASFSFLSSSSSSTVVPTTSANSSSVFGSTLSSSNPQPV
PTPFVFGQPSNTVTSSVFGNPAESATSQSFGFSQENKPATTSSSTGSTLTPFLFRSGESS
TNAANSGFTFGATTTSNSTGSSSSFLFGSGPAAPAAGPAFGATQLPAFGPSPGSGQQSAP
SFGSLSTPLFSAGSQPAPSAFGSVTSSTQPSVFGQQAAQQPAFGSGTPSAGSVFQFGSNT
TNFSFPNNPGVFTFGANPPASAAPAPPSGTSGFSFNQPPTFTVGTNGKNVFSASGSSVAG
RKIKTAIRRRK
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggcggcggcggcggcggcggcggcggcaagatccggacccgacggcaccac
ttgggagccgcgaagccgccctacgcgaggggcaagcagcagctggggctccttagcaga
gtgaccgaatcagtgaaaaacattgtaccaggatggttgcagaagtatttcaataaaagg
gaagataaatgtgtagatatgaatgaatctgcaaatgaggaagagaatccagtaaactat
caccatgattatgcaaatgaagatgccatggtaattgatgggagagtcacgcctgaatca
gcaagaattaatttagaagaaccatccacgagcaggtctgcattgaacttctcggatgtg
ttgacaaggccctcccttcaccggagccatttgaactgcaccgtgttggattccacagtc
ccacactgtcagccctccacatcttccacacttggcatcggcagtcctgggctgtccctt
gtaaaggaaataaaagattctacctctcagcatgatgatgataacatctcaacaaccagt
ggcttctcctctagagcatctgataaagatatcacagtttcaaaaaatacttcagcacca
ctgctctggtccccagaggctgaaagatctcattccctctcacaacatcctgcatctagc
tctaaaaaacctgcattcaatttgtctgcttttggatctccctctccttcacttggaaac
acttctgtctttaagacaagacagctcggggattctccgttttacccaggaaagacatct
tatggtggtgcagctgcagcagcaagacagacaaaagtgcagatttctgcttaccagcca
ccaataaaaagacaaatgaaagctaaacaagcaaacgtgcagtcctatggtgtgacaagt
tccacagcacggcgcatcttgcagacattggagaagatgtcaagccctttggcggatgct
aaaaggattccatcttctgtttctagtcctctgtcttctcctggggacaggagtgtgctg
aatatgactagcttccaatccagacaaaaccaggtggattcgcaacatcctcctgtccag
aaacttgtgacaccaaagccaatctccctgacagggagtcggatcacgtattttaaacca
tctctgaaatcagctactaattccagaaaaattcaccaaagggtagatacagaccatcaa
gacatgatggaggagagttttcctgcagaaaagcctgtaaaatcatctgaaagcaatttg
agctatcccaaactcgacactcctgcatccaacggtctgtcttcaggaggaaggatggat
agtgcctgtggcaagatgagaagggaaagggagcgatactgtgcatcaagacctggacaa
aaacaacaactggagatggagcaagaagagctccctgaagtacccctgcccatcagtact
gcatcgctgccgacgttcaacttcagtttccctgccagtagtgctgtctcctcatcaccc
agcattatttcaaaagcagtgatgaacaaggtacaaccagcaagtaatgttggcagtcct
acatttgtattttcatctccaattgtgaaatctactgaggtggaagtgctacctccctcg
tctcaaatcaagtttacatttagtgttcctgtcgtaaagtcgtcagagctttccagatcc
actgatacaccagtgacatccatccttagtccaggtagtgccactgtaaacagcaccagc
aataagaaggaagaagaagaagaatatgatgggttctgcaaacctgctaagttcttaaag
caaggaagtgtgttagacattctaaaaagccctggctttatgtctgggaaatcaccctcc
tgttcatcggcacagcctgtgacaagcacagtggtctataccaggcctgcaataagtagt
ttttctgcagctaaagacacctctaaacaagcatcctcgttttggcagtctgacacacat
gaccagtgtctgcagaacaaaaccacagatggcaaatgtgtgacatgtgaagctgctaaa
gtgtccactgctgaaagtacgaagcagacggtcagtgtgagtccgtgtgtctcctccaag
acagcagtccccacagtggggacactgggctttgaagacaaatttaaacaggcacccaac
atgtgggattgtgatacctgtctggtccagaacaaacctgaagctacaaaatgtatagca
tgtgagacaccaaagcctgggacaggagtgatgcctgctctgacaatgccaatggtcaca
gacaactcagtcacagtgacatccacctccagcagcactggcacaacagtcactctgggg
tttggagacaaatttaaacctccaaaaggctcttggaactgttcagtgtgccttctacaa
aataaggcagaagacagcaaatgtgtatcttgtcagtctgagaaaccagggagttcagtg
cctgtgaccagtagcagtgtttctgcttcttctggaggttttctggatttagacaaattc
aagatgcctgaaggaagttgggaatgtgagacctgcttggtccaaaacaaagcagaagcc
acaaaatgcatagcctgtggaagtgtgaagccaggcaccaaagcagagctcaaaggtttt
ggtactgctactgtgtctacaaatgctgcaatgccatcatttacatttggtgtcccatca
tcgtcctctgaatcctctcaaacattaagtagcacaggaaattttaaatttggagaacaa
agtagctttaagttcggcattgcatctgaatctgcatcgtccaacactgtgactggagga
tttaaatttcctactggttcaggaaacttcaaatttggagtttcttcctcagactctaaa
tcagaagacagcaaaaatgaaagtaaaagtaacagttttacctttggacttccatctaca
agcagtcaggctccttcaacatttcagtttggaacgacgagtctgggacagcaggaaaag
aaagaggaaccagttttgggaggttttggttttgctacaagttctacttcttccatagct
actaatgagaataaaactggagtcagtggcttcacttttggaactgtggcagaaaaggat
gcagcgtcacctgctttgccatttaagaagtcagatgagaaaaaggatgaaactgcttca
acgaagggaggcttttcttttggcagtgtggagtctgcacctgcctcacagtttgttttg
ggaagggcagaagagaagcaggattctgtcacttctgctggtccattagcatttggaaag
aaagctgacaatgaagagttaaagccacagcctatattttcatctgggacagctgagaat
accaaagaggagaacacagcaaaacctgtattcaattttagttttggtaaaccatcagaa
aaggaaagtgagcaagcaaaggcaccttttgcctttggggcaccagccagtacttccgat
caaggagcatccttcagcttcttgagctccagttcctccagcacagtggtacccaccact
tcagccaacagcagcagcgtgtttggcagcaccctctcttcctcaaaccctcagccagtt
cccactccctttgtgtttggacaacccagcaacactgtgaccagctctgtttttggcaat
cctgcagaatctgcaacatctcagtcatttggcttctctcaagaaaacaaaccagcaacc
acatcttccagcactggctcgactctcactccgtttctctttcgttcaggagagagcagt
accaatgcagcaaattcaggatttacttttggagctacaactacatcaaattcaacaggg
tcatcgtcttcgtttctgtttggctctgggcctgcagcgcctgctgctggcccggccttt
ggcgccactcagttaccagcattcgggccaagcccaggctccgggcagcaaagcgctcca
agttttgggtcgctgtccacaccgttgttttctgctggctctcagcccgctccctctgcc
ttcggctcggtgacaagcagcactcagccctccgtgttcggacagcaggcagcccagcag
ccagcctttggctccggtacccccagtgctggttctgtattccagtttggaagtaatact
actaatttcagctttccaaataacccaggagtattcacttttggtgcaaatcctcctgca
tcagcagctcctgcaccaccttctggcacttcaggattttcgttcaaccagcctccaaca
tttacagtggggactaatgggaaaaatgttttctctgcctctggatcttcagttgctggt
cggaagataaagactgcaattagacgtagaaagtaa
DBGET
integrated database retrieval system
