KEGG   Molothrus ater (brown-headed cowbird): 118695752
Entry
118695752         CDS       T11569                                 
Symbol
DSCAML1
Name
(RefSeq) LOW QUALITY PROTEIN: cell adhesion molecule DSCAML1
  KO
K06768  Down syndrome cell adhesion molecule-like protein 1
Organism
mate  Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:mate00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mate04515]
    118695752 (DSCAML1)
Cell adhesion molecules [BR:mate04515]
 Immunoglobulin superfamily
  Other
   118695752 (DSCAML1)
SSDB
Motif
Pfam: I-set Ig_3 Ig_2 fn3 ig FN3_DSCAM-DSCAML_C V-set Ig_VEGFR-1-like_5th VEGFR1-3_N_Ig-like C2-set_2 Pur_ac_phosph_N C1-set Fn3_ROS1 Ig_6 V-set_CD47 Receptor_2B4 Ig_RIMBP2 Fn3_VIN3 fn3_2 Fn3_Dep-1_3rd ChitinaseA_N Lit
Other DBs
NCBI-GeneID: 118695752
NCBI-ProteinID: XP_036253405
LinkDB
Position
22:7244757..7344674
AA seq 2046 aa
MWLVTFLLLYSLPKARAEDVGTSLYFVNDSLQQVTFSSTVGVVIPCPAAGSPSAVLRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITSYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVKAGR
LVELPCIASGYPNPAVRWIKDGRPLPADSRWSKRITGLTISDLRVEDSGTYICEVTNTFG
SAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYVIRWYRNTDLVVVDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKSQTAQDFSIITLEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTVTWALDDEPIPRDSGHRSNQYTMSDGTTVSHMNVSSPQIKDGG
VYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKD
SLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPITSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQY
LLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAI
KWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFK
LESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQ
GWSSGGCPITAIVLEYRPKGNWVWQSLRTNSSSEVFLTELREATWYELRMKACNSAGCGN
ETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKAT
IPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTR
NRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMSTP
SEPGICRFTASPPKPQDSERGKGVAVPIPHRASKSDYCNLPLYVKSEAFFRKPDAHEPCP
VVPPREASIRNLARAYHAQARHMTLEPGAKPLGLPPPASAATTLPQRTLPMPGPAGPAPA
PAASAAPAPPVPAEPPVPAGAAAEARVPTHSKVGGSRDSLLEMSTSGVGRSQKQGAGAYS
KSYTLV
NT seq 6141 nt   +upstreamnt  +downstreamnt
atgtggctggtaacttttctcctgctgtactctttgccgaaagcacgcgctgaagatgtt
ggaaccagcctctactttgtgaacgactccctgcagcaggtgaccttctccagcacagtg
ggggtggtgatcccctgcccggcagcagggtcacccagcgccgtcctccgctggtacctg
gccacaggtgacgacatctatgatgtgccccacatccggcacgtccatgccaatgggact
ttgcagctctaccccttctcgccatcagccttcaacagcttcatccacgacaacgactac
ttctgcaccgcagagaactcggctggcaaaatcaggagccccaacatccgtgttaaagca
gttttcagggagccgtacaccgttcgggtggaggaccaaaggtcgatgcgtggaaacgtg
gctgttttcaagtgcctcatcccctcctcagtgcaggaatatgttagcgttgtgtcctgg
gagaaagacaccgtttctatcatcccagaaaataggttttttattacttcttatggaggt
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaag
cacaagtacagcggggagacgcggcagagcaacggcgcccgcctctccgtctcagacccg
gcggagtccatccccaccatgttagacagcttccagtccagggaggtgaaggcgggccgg
ctggtggagctgccctgcatcgcctcgggctaccccaacccggccgtgcggtggatcaag
gacgggcggccgctccccgccgacagccgctggagcaagcgcatcacggggctgaccatc
agcgacctgcgcgtggaggacagcggcacctacatctgcgaggtgaccaacaccttcggc
tccgcagaggtcacggggaccctcacggtcatagaccctctgcgtgtgaccctcacacca
aagaagctcaaaacgggcatcggcagcaccgtcatcctgtcttgtgccctcagcgggtcc
cccgagtacgtcatccgctggtaccgcaacacggacctggtggtggtggatgactacatc
tccatccggggcatcagcaacgagaccctcctcatcacggccgcccagaagagccactcc
ggcgcctaccagtgcttcgccacccgcaagtcccagacggcacaggacttctccatcatc
acgctggaggatgggaccccccgcatcgtctcctccttcagcgagaaggtggtcaacccc
ggggagcagttctccctgatgtgtgccgccaagggggccccgccacccaccgtcacctgg
gcgctggacgacgagcccatcccgcgggacagcgggcaccgctccaaccagtacaccatg
tctgatggcaccaccgtcagccacatgaacgtcagcagcccgcagatcaaggacggcggc
gtgtaccggtgcaccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaac
gtaagaggtcccccgagcatccgtgccatgaagaacataacagcggtcgcgggtagggac
actttcatcaactgcagggtcatcgggtacccctattactccatcaagtggtacaaggac
tccctgctgctgcccgataaccaccgccaagtggtctttgagaacggcacgctgaagctg
atggatgtgcagaaaggcatggatgaaggagagtatctgtgcagcgtgctgatccagccc
cagctctccatcagccagagcgtccacgtcaccgtcaaagtccctcctctgatccagccc
ttcgagttcccgccagcctccatcggacagctcctctacatcccctgcgtggtgtcctcc
ggggacatgcccatccacatcacctggaggaaggacgggcacgtcatcctctctggctct
ggggtcaccatcgagagcaaggagttcatgagctccctgcagatctccagcgtgtccctc
aagcacaacgggaactacacctgcatcgccagcaacgacgctgccaccgtcagccgggag
cggcagctcatcgtgagggtgcctcctcgctttgtggtccaacccaacaaccaagatggc
atttatggaaaagctggggtgctgaactgctccgttgatgggtacccccctcccaaagtc
atgtggaagcacgctaaaggaagtggcaacccccagcagtaccaccccatccccctgacg
ggccgcatccagatcctgcccaacagctccctgctcatccgccacgtgctggaggaggac
atcggctactacctctgccaggccagcaacggcgtgggcacagacatcagcaagtccatg
ttcctcaccgtcaagatcccagccatgatcacctcccaccccaacaccaccatcgccatc
aagggccagaccaaggagctgaactgcacagcgcggggcgagcggcccatcatcatccgc
tgggagaagggggacaccgtcatcgaccccgaccgcaacatgcgctacgccatcaccacc
aaggacaacggcgacgaggtcatctccaccctcaagctgaaaccagccgaccgtggggac
tccgtcttcttctcctgtcacgccatcaactcctacggcgaggacagaggcctgatccag
ctcactgtccaagagccccctgacccgccggagctggagatccgtgaggtgaaagcccgg
agtatgaatttgcggtggacgcagcggttcgatggcaacagcatcatcactggctttgat
atcgagtacaagaacaagtcagattcctgggattttaagcagtctacacgcaacatctcc
ccgaccatcaaccaggcgaacatcgtggacctgcaccccgcctcggtgtacagcatccgc
atgtactccttcaacaagatcgggcgcagtgagcccagcaaggagctcaccatcagcacc
gaggaagcagctcccgatggccctccaatggatgtcaccttgcagcccatcacatctcag
agcatccaggtcacctggaaggccccgaagaaggagctgcagaacggggtgatccgtggc
taccagatcggctaccgggagaacagcccgggcagcaacgggcagtacagcatcgtggag
atgaaggccacgggggacagtgaggtctacacgctggacaacctcaagaagtttgcgcag
tacggggtggtggtgcaggcgttcaaccgcgcgggcacggggccctcgtccagcgagatc
aacgccaccacgctggaggacgttcccagccagccccccgagaacgtgcgagccatttcc
atcacctcggacgtggccgtgatctcctggtcagagcccccgcgcagcaccctcaacggg
gtgctcaagggctaccgggtcatcttctggtccctctacatggacggagagtggggtgag
atgcagaacatcacgaccacgcgggagcgagtggagctgcggggcatggagaaattcacc
aactacagcgtgcaggtgctggcctacacccaggcaggtgatggcgtccgcagcagcgtg
ctctacatccagaccaaggaggacattccaggtcccccggctgggatcaaggctgtgccg
tcctctgccagcagcgtggtggtgtcctggctgccgccggccaagcccaacggcatcatt
cggaagtacaccatcttctgctccagccccggctcggggcagccggctcccagcgagtac
gagaccagcccggaccagctcttctaccgcatcgcccacctgaaccggggccagcagtac
ctgctctgggtggccgccgtcacctccgccggccgcggcaacatcagcgagaaggtcacc
atcgagcctgcgggcaaagcccctgccaagatcatctccttcggaggcaccgtcaccacg
ccgtggatgaaggacgtgaggctgccgtgcaactccgtcggggagcccgtgcccgccatc
aagtggaccaaggacagcgaggactctgccatcccggtgacggtggacgggcaccgcctg
atccaggccaacgggacgctggtgctgcgctcggtgaaggccgaggactccggctactac
acctgcactgccaccaacacctggggcttcgacaccatcatcatcaacctgctggtgcaa
gtgcccccagaccagccccgcctgaccgtctccaagacctcggcatcgtccatcacgcta
gcctggatccccggggacaatgggggcagctccatccgaggcttcgtgctccagtactcg
gtggacaacagcgaggagtggaaggacgtgttcatcagctcctcggagcgctccttcaag
ctggagagcctcaagtgtggcacgtggtacaaggtgaagctggcggccaagaacagcgtc
ggcgccggccgcatcagcgagatcatcgaggccaagacccacggcagagagccctccttc
agcaaggaccagcacctcttcacccacatcaactccacgcacgccaggctgaacctgcag
ggctggagcagcgggggctgccccatcaccgccatcgtcctggagtaccggcccaagggc
aactgggtgtggcagagcctccgcaccaacagctccagcgaggtgttcctgaccgagctg
cgcgaggccacctggtacgagctgcgcatgaaggcctgcaacagcgccggctgcggcaac
gagaccgcgcagttcgccacgctggactacgacggcagcaccatccccccaatcaagtct
gcccaaggggaaggggatgatgtgaagaagctcttcaccatcgcctgccccgtgatcctg
gccacgctgggagtggccctgctcttcatcatccgcaagaagaggaaggagaagcggctg
aagaggcttcgagatgcaaagagtttggcagaaatgctgatcagcaagaataaccgcagc
tttgacacgccggtgaaggggcccccgcagggcccccgcctgcacatcgacatcccgcgg
gtgcagctcctcatcgaggacaaggagggcatcaagcagctgggggatgacaaagccacg
atcccggtgaccgacacggagttcagccaggcagtgaacccccagagcttctgcacaggc
gtctctctgcatcacccagccctgatccagaacacagggcccctcatcgacatgtctgac
atccgccctggcaccaaccctgtgtcgaggaagagtgtgaagtctgcgcacagcacccgt
aaccggtactccagccagtggacactcaccaagtgccaggcgtccacccctgcacggacc
ctcacctcggactggaggacagtgggctcccagcatggcatcacagtcactgagagtgac
agctacagtgccagcctctcgcaggacacagacaaggggcggaacagcatggtgtccacg
gagagcgcctcgtccacctacgaggagctggcgcgcgcctacgagcatgccaagctggag
gagcagctgcagcacgccaagttcgagatcaccgagtgcttcatctccgacagctcctcg
gaccagatgaccacgggcaccacggacaacgccgacagcatgacctccatgagcaccccg
tccgagcccggcatctgccgcttcaccgcctccccgcccaagccccaggacagcgagcgg
ggcaagggcgtggccgtgcccatcccacaccgcgccagcaagagtgactactgcaacctc
ccgctgtacgtcaagtcggaggccttcttccgcaagcccgacgcgcacgagccgtgcccg
gtggtgccgccgcgggaagcctccatccgcaacctggcacgggcgtaccacgcgcaggcc
cggcacatgacgctggagcccggcgccaagcccctggggctgcctcccccggcctccgcc
gcaaccaccttacctcagaggactctccccatgcccggcccggccggccccgcgcctgca
cctgctgccagcgccgccccggctccccccgtgcccgccgagccccccgtgcccgccggt
gccgccgccgaggcgcgggtgcccacgcactccaaagtggggggctccagggactcgctg
ctggagatgagcacgtcgggggtaggcaggtctcaaaaacagggcgccggagcctactcc
aagtcctacacgctggtgtag

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