Molothrus ater (brown-headed cowbird): 118696208
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Entry
118696208 CDS
T11569
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04514
Cell adhesion molecule (CAM) interaction
mate04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118696208 (NFASC)
04517 IgSF CAM signaling
118696208 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mate04515
]
118696208 (NFASC)
Cell adhesion molecules [BR:
mate04515
]
Immunoglobulin superfamily
L1 family
118696208 (NFASC)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_5
Ig_PDGFR_d4
BiPBP_C
DUF4293
Motif
Other DBs
NCBI-GeneID:
118696208
NCBI-ProteinID:
XP_036254111
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All DBs
Position
25:complement(4017036..4100293)
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AA seq
1368 aa
AA seq
DB search
MIPRRAQATCAGIAFALCLQHLVSAIEVPLDPNIQSELPQPPTITKQSIKDYIVDPRDNI
FIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPDDYEGEYQCF
ARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPEPVIFWMSSS
MEPIPQDKRVSQGHNGDLYFSNVLAQDALTDYSCNARFHFTHTIQQKNPYTLKVKTKKSH
NETSLGNSPAMYRARGISETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYK
KGGELPVGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDE
PENLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIESSPPNPSREVAGDTIVFRDTQIGS
SAVYQCNASNEHGYLLANAFVSVLDVPPRILGPRNQLIRVIQNNRTRLDCPFFGSPIPTL
RWFKNGQGSTLYGDNYKTHENGSLEIFMARKEDQGIYTCVATNILGKAEAQVRLEVKDPT
RIVRGPEDQVVKRGTMPRLHCRVRHDPTLRLMVTWLKDDAPLYLGNRMKKEEDGLTIYGV
TEKDQGDYTCVASTELDKDLAKAYLTVLAIPANRLRDLPKARPDQPRDLELTDLAERSVR
LTWIPGDDNNSPITDYIVQFEEDRFQPGVWHDHSRYPGSVNSAVLSLSPYVNYQFRVIAV
NDVGSSVPSAPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIV
RWRRRDPRGSWYNETVRGARHVVWNTPIFVPYEIKVQAENDFGRAPEPDTYIGYSGEDYP
KAAPTDVRIRVLNSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQFVS
FPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEMKEFPTPEGVPSAPRYLRIRQPNL
EIINLEWDHPEHPNGIITGYTLQYTPFNGSRMGRTVVENLSPNQTRFTLQRSDPISRYRF
RLRARTQVGEGEILMEDSPALLDEATPSPEATGPPPTAVEETSPETTPETTPETTPETSP
TTSPTTTPTTTDTTTTTTTTTATTTTTSTAASTAASTSAAAERAPAATTRHELAANGSSI
WDIRAMANSNWANITWSHNFSAGTDFVVKYITSNKTEKSIPVKAQGPSSVQLADLTPGMM
YKLWVFPIWSHPSEHSYITFTTSSAYTKNQVDIATQGWFIGLMCAIALLVLILLIVCFIK
RSRGGKYPVRDNKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQTSLDGTIKQQESDDSLV
DYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaaggagagcccaggccacctgcgccggaattgccttcgccctctgcctccag
cacctcgtcagcgccatcgaggtccccctggacccaaatatccagagtgaattgccgcag
ccccccacgatcaccaagcaatccatcaaggattacatcgtggatcccagggacaacatc
ttcatcgaatgcgaagccaaaggcaaccccgttcccaccttttcctggacgcggaatggg
aagttcttcaacgtggccaaggatcccaaggtgtccatgaggaggagatcggggactttg
gtcatcgacttccacagcgggggccggcccgacgactatgagggcgagtaccagtgcttc
gccaggaacgactacggcacggccctttccagcaaaatccacctccaggtttccaaatct
ccgctgtggcccaaggagaaggtggatgtgatcgaggtggatgagggggccccgctgagc
ctgcagtgcaatcccccgcccggcctccccgagcccgtcatcttctggatgagcagctcc
atggagccgatcccgcaggacaagcgcgtgtcccaaggccacaacggggacctttacttc
tccaacgtactggcgcaggacgcgctgaccgactacagctgcaacgcccgcttccacttc
acccacaccatccagcagaagaacccctacaccctcaaggtcaaaaccaagaagtcccat
aacgaaacgtccttaggaaattcccccgccatgtaccgcgcccgagggatctcagaaacc
actcccagcttcatgtatccctacggaacttccagcagccagatggtgctccgaggggtg
gacctcctgctggaatgcatcgcctccggagtaccagcgccggacatcatgtggtacaag
aaaggcggggagctcccggtgggtaaaaccaagctggagaacttcaacaaggccctgcgc
atctccaacgtgtccgaggaggactccggggaatatttctgcctggcctccaacaagatg
ggcagcatccgccacacgatctcggtgagagtgaaggctgctccctactggctggatgag
ccggagaacctgatcctggcgcccggcgaggacggcaggctcgtgtgccgggccaacggc
aaccccaaaccctccatccagtggctggtgaacggagagcccatcgaatcgtctccgccc
aacccgagccgggaggtggccggggacaccatcgtgttccgggacacgcagatcggcagc
agcgccgtgtaccagtgcaacgcgtccaacgagcacggctacctgctggccaacgccttc
gtcagcgtgctggatgttcccccccggatcctgggcccccggaaccagctgatcagggtg
atccagaacaacaggacgcgcctggattgtcccttttttgggtcccccatccccaccctg
cgctggtttaagaacggccaggggagcactctgtatggagacaactacaaaacccacgag
aacgggagcttggagatattcatggctcggaaggaggaccagggaatctacacctgcgtg
gccaccaacatcctggggaaagctgaggcccaggtccgcctggaggtcaaagaccccacc
aggatcgtgaggggccccgaggaccaggtggtgaagaggggcaccatgccccggctccac
tgccgcgtcaggcacgaccccacgctgcgcctcatggtgacctggctcaaggacgatgcc
cccctgtacctggggaacaggatgaagaaggaagaggatggtctgacgatctatggagtg
actgagaaggaccagggggattacacgtgtgtggccagcacggagctggacaaggacttg
gccaaggcctatctcaccgtgctggccatccctgctaatcggttgagagatttacccaaa
gcacgacctgaccagccccgggacttggagctgacggatctggccgagaggagcgtgcgg
ctgacgtggatccctggggatgacaacaacagccccatcacagactacattgtgcagttt
gaggaggatcgcttccagcccggagtgtggcacgaccactccaggtaccccgggagcgtc
aactcggccgtgctgagcctgtccccgtacgtgaattaccaattccgggtgatcgccgtc
aacgacgtgggcagcagcgtgcccagcgcgccctccgagcgctaccagaccaacggggca
cgtcctgaaataaatccaacaggagttcaaggggcagggacccaaaaaaacaacatggag
ataacgtggacccctctgaacgcaacgcaggcttacgggcccaacctgaggtacatcgtg
cggtggcggcggcgggacccgcgcgggagctggtacaacgagaccgtgcggggcgcgcgg
cacgtggtgtggaacacgcccatcttcgtcccctacgagatcaaggtgcaggccgagaac
gacttcggcagagcccccgagcccgacacctacatcgggtactccggggaggattatccc
aaggctgcgcccacggatgtcaggatcagagtgttaaacagcactgccatagctctgacc
tggacacgggtgcacctggacaccatccagggacagctcaaggagtaccgagcctatttc
tggagagacagcagcttgctgaagaacctgtgggtctccaaaaaacggcagtttgtgagt
tttcctggagaccgcaaccggggcatcgtgtcccggctgttcccttacagcaactacaag
ttggagatggtggtcaccaacggccgaggggacgggccccgcagcgaaatgaaggaattc
cccacccctgaaggagtgcccagcgcccccaggtacctgcggatccgacagcccaacctg
gaaatcatcaacctggagtgggatcaccccgagcatcccaacgggatcatcacgggatac
accctccagtacacgccctttaacgggtcccggatgggcaggacggtggtggagaacctg
tcccccaaccagacgaggttcaccctgcagaggtcagaccccatctcccgctaccgcttc
aggctccgcgcccgcacccaggtgggagagggagagatcctgatggaggattcaccagcg
ctgctggatgaagccacgccaagcccagaggcaactgggccgcctccaaccgcagtggag
gaaaccagtccagaaaccactcctgaaaccactcctgaaaccactcctgaaaccagtcct
acaaccagtcctacaaccaccccaaccaccaccgacaccacaaccacaacaaccaccacc
acagccaccacaaccaccaccagcaccgccgccagcaccgccgccagcaccagcgccgct
gccgagagggctccggcagccaccaccaggcacgagttggccgccaatggatcgtccata
tgggacatcagagccatggcaaacagtaactgggcaaacatcacctggagccacaatttc
tcggcaggaactgactttgtggttaagtatatcaccagtaacaagacagagaaatcaatc
cccgttaaggctcagggcccgtcctcggtgcagctggcggatctgacgccggggatgatg
tacaagctgtgggtgttccccatatggtcccaccccagcgagcactcgtacattaccttt
accaccagctcagcctacaccaagaaccaggtggacatcgccacgcagggctggttcatc
ggcctcatgtgcgccatcgccctcctggtgctcatcctcctcatcgtctgcttcatcaag
aggagccgcggcgggaagtacccagtgcgggacaacaaggacgagcacctcaatcccgag
gacaagaacgtggaggacggatccttcgactacagcgatgaagacaacaaacctcttccc
aacagccagacctcgctggacgggacgataaagcagcaggagagcgacgacagcttggtg
gactacggagaagggggcgagggccagttcaatgaggacggctccttcatcggccagtac
acggtcaagaaggacaaagaggagaccgagggcaacgagagctccgaggccacgtccccc
gtcaatgccatttattccttggcatag
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integrated database retrieval system
