Molothrus ater (brown-headed cowbird): 118696225
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Entry
118696225 CDS
T11569
Symbol
PPFIA4
Name
(RefSeq) LOW QUALITY PROTEIN: liprin-alpha-4
KO
K26226
liprin-alpha
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118696225 (PPFIA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mate04131
]
118696225 (PPFIA4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
118696225
NCBI-ProteinID:
XP_054373240
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Position
25:complement(525080..585931)
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AA seq
1229 aa
AA seq
DB search
MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLAVTQSRLQ
ETLRERDQLQRQLNSALPQEFATLTRELSACREQLLEREEEISELKAERNNTRLLLEHLE
CLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERV
ATLEEQLVDAHRQVAALQQGSAREPAAGEREEREPKEPAAKLPWKRLSNGSVHPDDEAGR
VVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREA
LAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELL
ELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAKERHGSIEEHLRQLETQLEEKNQELA
RARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLLQELENTQKQIE
EHQHDKRRLSDEIDKLRLEVDQLKTRSGTFVESVHTRSHMGSATDLRFPLGAVVHGPAEP
FGAAPGLPRAQKGRFSARREEPAKDWEQAQAGGVLAAGPHAFDSDPDISDVDEDDRETLF
SSMDVLSPGGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEG
LNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLSSRSAAQDLDRMGIMTLPSDLRKH
RRKLLSPAARDESREDKTTIKCETSPPSSPRTLRLEKLGHPALSQEDGRSSLEDQASNPS
SSQDSLHKGSKRKGIKSSIGRLFGKKEKGRFNQLSREGSTGQVLLTDVEGGIQDPLGLGK
LGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANVKS
GAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEM
ENMATSTKTDTEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHL
TKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREETQHEIKDVLVWTNDQVI
HWIQSIGLREYGNNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFNNL
LALGTDRRLDDGDDKTFRRTPSWRKRFRPRDVHSINLLSGSAETLPAGFRVTSLVPLPPP
AAPAKKMPPEVSASGSPRLETSTVRTYSC
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgagggggacccgctgggccccccccagggc
tcggaggcggacgctgacttcgagcagctgatggtgaacatgctggacgagagggacaag
ctgctggacaccctgcgggagacgcgcgagacgctcgcggtcacccagagccgcctgcag
gagacgctccgggagcgggaccagctccagaggcagctgaactcggcactcccgcaggag
tttgcgacgctgacgcgggagctcagcgcctgccgggagcagctcctggagagggaggag
gagatctcagagctgaaagccgagcgcaacaacacccggctcctgctggagcacctggag
tgcctggtgtcacggcatgagcgctccctcaggatgaccgtggtcaagcggcaggcccag
tcaccttctggggtgtccagtgaggtcgaggtgctcaaggcactcaagtcactctttgag
catcacaaggcactggatgaaaaggtgagggaacgcctgcgagcagccttggagcgcgtg
gccaccttggaggagcagcttgtggatgcccatcggcaggtggcagctctgcagcaaggc
tctgcccgggagcctgcggcgggcgagcgcgaggagagggagcccaaggaaccagcagcc
aaacttccatggaagcgtctctccaatggctctgtccacccggacgatgaggccgggcgg
gtggtggagctgcaggagctcctggagaagcagaattttgaagtagtccaggccaaggaa
cgaatctctgccttggctgccagcgtggctgagctggaggaggatctgggcactgccagg
aaggatctgatcaaatctgaggagatgagcagcaagtaccagagagacctccgagaggcc
ctggcacagaaggaggacatggaggagaggatcaccacgctggagaaacggtacctggca
gcccagcgagaggccacctccatccatgacctcaacgacaaattggagaatgagttggcc
aataaggagtccctgcaccgccagtgcgaggagaaggcgcggcacctgcaggagctgctg
gagctggccgagcagaagctgcagcagacaatgagaaaggcagagacgctgcccgaggtg
gaagccgagctggcccagcgcattgctgcgctcaccaaggcaaaagagaggcacgggagc
atcgaggagcacctcaggcagctggagactcagctggaggaaaagaaccaggagctggcc
agggcgcggcagagggagaagatgaacgaggagcacaacaagcggctctcggacactgtg
gatcggctgctgagcgagagcaacgagcggctgcagctgcacctcaaggagaggatggca
gccttggaggaaaagaatacattgttacaagagctggaaaatacccaaaagcagatagag
gaacaccagcatgacaagcggcgtttgtctgacgagatcgacaagctgaggctggaggtg
gatcagctcaagaccaggagtgggacatttgtggagagtgtgcacactaggtcccacatg
ggcagtgccactgacctgcgcttcccactgggagctgtggtccacggcccggccgagccc
ttcggagcagctccggggctgccccgggcacagaagggacgattcagtgcccggagagag
gagccagccaaggactgggagcaggcccaggcaggtggggtcctggccgcggggcctcac
gccttcgacagcgaccccgacatctctgacgtggacgaggatgaccgtgagacgctgttc
agctccatggatgtgctctctcctggtgggcactcagacgcccagacattggccatgatg
cttcaggagcagctggatgccatcaatgaagagatcaggatgatccaggaggagaaggag
tccacggagctccgtgcagaggagctggagacgcgggtcacgagcggcagcatggagggc
ctgaacctcacccagctgtgcaagagggcctccatccccacctcgctgacagccctgtcc
ctggccagctcgtcccccccgctcagcggccgctccacgcccaagctgagctcccgcagc
gcggcgcaggacctggaccgcatggggatcatgacgttgcccagcgacttgaggaagcac
cggaggaaactgctatcacctgcagctcgggatgagagccgggaggacaaaaccaccatc
aagtgtgagacatccccgccctcctcacccaggacactgcggctggagaagctgggccac
cctgctctgagtcaggaggatggcaggagctcactggaggaccaggctagcaatcccagc
agcagccaggactccttgcacaagggctccaagaggaaggggatcaaatcctccatcggg
cgcctgtttgggaagaaggagaagggtcgttttaaccagctgagcagagaagggtccaca
gggcaggtgctgctgactgacgtggaggggggcatccaggaccccctgggactgggcaag
ctgggggctcaggctgagaaggatcggcgcctacggaagaagcatgaactcctggaggag
gctcggaggaaaggattgccctttgcccactgggatggccccactgttgtgtcctggctg
gagctctgggtggggatgccagcctggtacgtggccgcatgccgggccaacgtcaagagc
ggggccatcatgtcggccctgtcggacactgagatccagcgcgagatcggcatcagcaac
gccctgcaccgcctcaagctgcgcctggccatccaggagatggtgtccctgaccagcccc
tcggcgccgcccacgtcccgcacgtcctctggaaatgtctgggtgacccatgaggagatg
gagaacatggcaacttccaccaagacggacacagaggaaggcagctgggcacagaccttg
gcctacggggacatgaaccatgagtggattgggaatgagtggctgcccagcctgggtctg
ccccagtaccgcagctacttcatggaatgcctggtggacgcgcgcatgctggaccacctc
accaagaaggacctgagggtgcacctgaagatggtggacagcttccaccgcaccagcctc
cagtacggcatcatgtgcctcaagaggctcaactacgaccgcaaagagcttgagaggagg
cgagaggagacccagcatgaaatcaaagatgtgttggtgtggaccaatgaccaggtcatt
cactggatccagtccatcgggctgcgcgagtacgggaacaacctggtggagagtggtgtg
cacggggccctgctggccctcgatgaaaactttgaccacaacagcctggcccttgtgctg
cagatccccactcagaacacccaggctcgacaagtgctggagagggagttcaacaacctg
ctcgccttgggcacagaccggaggctggatgatggcgatgacaaaactttccgtcggacg
ccatcctggcgcaagcgcttccgcccgcgggacgtgcacagcatcaacctcctgagcggc
tctgccgagaccctccccgccggcttccgtgtcaccagcctcgtgccactgccccctccg
gctgctccagccaagaaaatgcccccggaagtcagtgcctccgggtccccaaggctggag
acgtccacggtccggacgtactcgtgctga
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