KEGG   Molothrus ater (brown-headed cowbird): 118696239
Entry
118696239         CDS       T11569                                 
Symbol
CACNA1S
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1S
  KO
K04857  voltage-dependent calcium channel L type alpha-1S
Organism
mate  Molothrus ater (brown-headed cowbird)
Pathway
mate04010  MAPK signaling pathway
mate04020  Calcium signaling pathway
mate04260  Cardiac muscle contraction
mate04261  Adrenergic signaling in cardiomyocytes
mate04270  Vascular smooth muscle contraction
mate04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:mate00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    118696239 (CACNA1S)
   04020 Calcium signaling pathway
    118696239 (CACNA1S)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    118696239 (CACNA1S)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    118696239 (CACNA1S)
   04261 Adrenergic signaling in cardiomyocytes
    118696239 (CACNA1S)
   04270 Vascular smooth muscle contraction
    118696239 (CACNA1S)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mate04040]
    118696239 (CACNA1S)
Ion channels [BR:mate04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   118696239 (CACNA1S)
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel CAC1F_C
Other DBs
NCBI-GeneID: 118696239
NCBI-ProteinID: XP_054373236
LinkDB
Position
25:complement(1800465..1861941)
AA seq 1846 aa
MEPSSPQGDVKKRQQKEKSKKPVPPIAPRPPRALFCLTLENPLRKACISIVEWKPFEIII
LLTIFANCVALAIYLPMPEDDTNIANSSLEKIEYAFLIFFAIEAMLKIIAYGFLFHTDAY
LRNGWNVLDFSIVTLGLITMTLEQVNVKQAGPSGGKGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGQELFKGRMHKTCYYLGTDVIATVGSE
KPAPCTSSGHGRHCSINGSECRGGWAGPNHGITHFDNFGFAMLTVYQCITMEGWTEVLYW
VNDAMGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLE
EDLKGYMDWITHAEVMDSDRARGEGMMPSDEGGSETESLYEIEGMNKWILFFRQWRRWNR
MFRRKCRDVVKSKFFYWLVILMVALNTLSIASEHHFQPEWLTQVQDNANRLLLALFVAEM
LLKMYALGLRQYFMSLFNRFDCFVVCSGILELILVELGTLSPLGISVLRCIRLLRIFKIT
RYWTSLSNLVASLLNSVRSIASLLLLLFLFIIVFALLGMQLFGGKFDFEDMEVRRSTFDN
FPQALISVFQILTGEDWNSIMYDGIMAYGGPSFPGMLVCIYFIILFVCGNYILLNVFLAI
AVDNLAEAESLTLAQKAKAEERKRRKMSRGYPEKSEEDKQMLAKKLEQKAKGEGIPTTAK
LKVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASSF
FIFSPTNKFRVLCHRTVNATWFTNFILLFILLSSISLAAEDPIRAESFRNKILGYFDIGF
TSVFTVEIVLKMTTYGAFLHKGSFCRNSFNILDLLVVAVSLISMGFESSTISVVKILRVL
RVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVVVTTLLQFMFACIGVQLFKGKFYRCTD
PSKLTEKECRGQFINYVDADPTQIEVQERVWLHNDFHFNNVFSAMMSLFTVSTFEGWPEL
LYKAIDTNAENVGPIYNYRVEIAMFFIIYIILIAFFMMNIFVGFVIVTFQEQGENEYKNC
ELDKNQRQCVQYALKARPLRRYIPKNPYQYQIWYVVTSSYFEYLMFFLILLNTICLGMQH
YNQSAEMNHISDILNVAFTILFTLEMILKLMAFKAKGYFGDPWNVFDFLIVIGSIIDVIL
SEIDTILAPSGGLYCLGGGCDGTDPDDNSRVSITFFRLFRVMRLVKLLSRGEGVRTLLWT
FIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIAMVDGTQINRNNNFQTFPQAVLLLFRC
ATGEAWQEILLDCSYGRRCDPESDYAEGEEYTCGTGFAYFYFISFYMLCAFLIINLFVAV
IMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRINPPLGFGKFC
PHRVACKRLVCMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRAIIKKIWK
RTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFMKRQEEYYGYRPKKNAVEIQAGL
RSIEEEAAPEIHRAISGDLTAEEELERAMVEAALEEGIYRRTGGLFGQVDSFMEPSSPLQ
PQVASQRPLQFTEVGTEDLDSPVFLDDFPQEANTNINNANSSSWLQGVHYEDEVLRKALP
AARRRPGLGXNRPIPMEMLSRRRGGGTSGALSSPGPLLPQQLPTEDGTVTGTASSSRFQQ
RETGEPGASSTPAITFLIQEALISGGLGALAQDSSFLAVTRDEMAASRQLQVDEVEKAAV
ELLKGRETLQGTRTGSAPLDTSAVAPGRSPGLGGSPSQKTITATRL
NT seq 5541 nt   +upstreamnt  +downstreamnt
atggagccctcttctccccagggtgacgtgaagaagaggcagcagaaggagaagtccaag
aagccggtaccaccgatagctcctcgtccacccagggctctgttctgcctcaccctggag
aaccccctgaggaaggcctgcatcagcatcgtggagtggaaacccttcgagatcatcatc
ctcctcaccatctttgccaactgtgttgctctggccatctacctgcccatgcctgaggat
gacaccaacattgccaactccagcctggagaagattgaatatgccttcctcatcttcttt
gccatcgaggccatgctgaagatcatcgcctacggcttcctcttccacacggacgcctat
ctccggaacggctggaacgtgctcgacttttccattgtgactctagggctcatcaccatg
accctggagcaggtcaatgtgaagcaggcagggccctcggggggaaaaggcggctttgac
gtgaaggcgctgcgagcgttccgcgtgctgagacccctgcgcctggtgtccggagtgcca
agccttcaggtcgtcctgaactccatcatcaaggccatggtgcccctgctgcacatcgcc
ctgctggtgctcttcatgatcatcatctacgccatcgtgggccaggagctcttcaagggc
aggatgcacaagacctgctactaccttgggacagacgtgattgccacggtgggctcagag
aagccagccccgtgcaccagctcgggccacgggcggcactgcagcatcaacggcagcgag
tgccgcggcggctgggccgggcccaaccacggcatcacccacttcgacaacttcggcttc
gccatgctcaccgtctaccagtgcatcaccatggagggctggacagaggtcctctactgg
gttaatgatgccatggggaatgaatggccctggatctactttgtcagccttatcttgctt
ggctccttctttgtgctcaacctggtgctgggggtgctcagtggcgagttcaccaaggag
cgcgagaaggccaagtcgcgcggaacgttccagaagctgagggagaagcagcagctggag
gaggatttgaagggctacatggactggatcacccacgcagaggtcatggacagtgatcgg
gccaggggagaaggtatgatgccatcggatgaaggagggtcagagacagagagcttgtat
gaaattgagggcatgaacaagtggattctcttcttccgtcagtggaggcgttggaaccga
atgtttcgtaggaagtgcagggatgtggtgaagtccaagttcttctactggcttgtcatc
ctgatggtggcactgaacaccctgtccattgcctctgagcaccacttccagccagagtgg
ctgacacaggtgcaagacaatgccaaccgtttgctgctggcgctgtttgtggccgagatg
ctgctgaagatgtacgcgctggggctgcgccagtacttcatgtccctcttcaaccgcttc
gactgcttcgtggtgtgctcaggcatcctggagctcatcctggtggagctgggcaccctg
tcccccctgggcatctccgtgctgcgctgcatccgcctcctccgcatcttcaagatcacc
aggtactggacatctttaagcaacctggtggcttctctgctcaactcagtccgctccatt
gcttctctgctcctcctcctcttcctcttcatcatagtttttgccctgctgggcatgcag
ctctttgggggcaagtttgattttgaggacatggaagtgcggcgcagcacgttcgacaac
tttccccaggccctcatcagtgtcttccagatccttactggagaggactggaattcaatc
atgtatgatgggatcatggcctacgggggcccgtcctttcctggcatgctggtctgcatc
tacttcatcatcctctttgtctgtgggaactatatcctcctcaatgtgttcctggccatt
gcagttgataacctggctgaggctgagagccttaccttggcccagaaggccaaagcagag
gagcgcaaacggcggaagatgtccagaggttacccagagaaatctgaagaggacaagcag
atgctggcaaagaagctggagcagaaagcaaagggagaagggattcccacaacagccaag
ttgaaagtggacgaatttgaatccaatgtcaatgagatcaaagacccctacccttctgca
gacttcccaggtgatgatgaggaagatgagcctgaaatccccctgagtcctcggccccgt
ccccttgcagagctacagctgaaggagaaggctgtgcccatgcctgaagccagctcattc
ttcatcttcagcccaaccaacaagtttcgggtcctgtgccacagaactgttaatgccacc
tggttcaccaacttcatcctgctcttcatcctgctcagcagcatttccctggcagctgag
gatcccatccgggccgagtccttccgcaacaagattcttggatactttgacattggtttc
acctctgtcttcacagttgaaatcgtcttgaagatgacaacctacggtgctttcctgcac
aaaggctccttctgcaggaactccttcaacatccttgacttactggtggtcgctgtctcc
ctcatctccatgggatttgagtccagcaccatctctgtggtgaagatcctgcgggtgctg
agggtgctgaggcctctgcgagccattaacagggcaaaggggctgaagcacgtggtccag
tgtgtgtttgtggccatcaagaccattggtaacatcgtggttgtcacgacgttgctgcag
ttcatgtttgcctgcattggagttcagctcttcaagggcaagttctacaggtgcacagac
ccatccaagctgacagagaaggagtgcaggggtcagttcatcaactacgtggatgcagac
cccacacagatcgaggtccaggagcgtgtctggctgcacaacgacttccacttcaacaac
gtcttctcagccatgatgtcattgttcactgtctccaccttcgagggctggccagagctg
ctgtacaaggccattgacaccaatgctgagaatgtaggccctatctacaactaccgggtg
gagattgcaatgttcttcatcatctacatcatcctcattgccttcttcatgatgaacatc
tttgtgggctttgtcatcgtcactttccaggagcaaggggagaatgagtacaagaactgt
gagctggacaagaaccagcggcagtgtgtgcagtacgcgctcaaggctcgcccgctgcgc
cgctacatccccaagaacccctaccagtaccagatctggtacgtggtcacctcctcctac
ttcgagtacctcatgttcttcctgatcctgctcaacaccatctgcctgggcatgcagcat
tacaaccagtctgcagaaatgaaccacatctcagacatcctcaacgtggccttcaccatc
ctcttcaccctggagatgatcctcaagctcatggccttcaaagccaagggctacttcgga
gacccctggaatgtctttgacttcctcatagtgattggcagcatcattgatgtcatcctc
agtgagattgataccatcctggcacccagtggtggcttgtactgcctgggtgggggctgt
gatggcactgaccctgatgacaactcccgtgtctccatcacttttttccggctcttccgg
gtgatgcggctggtgaagctgctgagcaggggggaaggtgtcaggaccctcctgtggacc
ttcatcaagtcctttcaggctctgccatacgtggccctgctgattgtgatgcttttcttc
atctatgctgtgattgggatgcagatgtttgggaagattgccatggtggatgggacccag
atcaaccgaaacaacaacttccagacctttccacaggccgtgctgctgctcttcaggtgt
gccacgggcgaggcgtggcaggagatcctgctggactgcagctacggccggcgctgcgac
cccgagtccgactacgccgagggggaggagtacacctgtggcactggctttgcctacttc
tacttcatcagcttctacatgctctgtgccttcctgatcattaacctctttgtggctgtc
atcatggacaactttgactacctgacacgggactggtccatcctggggccccatcacctg
gatgagttcaagaggatctgggctgagtacgaccccgaggccaaggggaggatcaaacac
ttggatgtggtgactctgctgaggcgtatcaaccctcccctgggctttgggaagttctgc
ccacaccgtgtggcttgtaagcgcctggtgtgcatgaacatgcccctgaacagcgacggc
accgtcaccttcaacgccaccctctttgccctggtgaggacagccctcaagatcaagaca
gaaggtaattttgaacaggccaatgaggagctcagagctattatcaaaaaaatctggaaa
cgaaccagtatgaagcttttggaccaggtcatcccacccattggagatgatgaggtgaca
gtgggcaaattctatgccactttcctgatccaagagcacttcaggaagttcatgaagcgc
caggaggagtattatgggtaccggcccaagaagaacgctgtggagatccaggctgggctg
aggagcattgaagaagaagctgctcccgaaatccatcgggccatttctggggacttgact
gcagaggaggagctggagagagccatggtggaggctgccctggaggaggggatttacagg
agaacaggtggcctgtttggccaggtggacagcttcatggagcccagcagcccactgcag
ccccaggtggccagccagaggcccctgcagttcactgaggtgggcactgaggacctcgac
tctcctgtgttccttgatgacttcccccaggaggccaacaccaacatcaacaatgccaac
agcagcagctggctgcagggggtgcactatgaggatgaggtgctgaggaaggcgctgcca
gcagcacgcaggcgcccaggcctggggtgaaaccgccccatccccatggagatgctgagc
aggaggagaggagggggcacctctggggctctctcatcaccagggccactcctcccccag
cagctgcccacagaggatggcaccgtgacaggaacagcatccagctccaggttccagcag
agagaaactggtgagccaggagcatcctccaccccagccatcaccttcctcattcaggag
gctctgatctccggaggcctcggggctctggcccaggactcgtccttcctagcagtgacc
agggatgagatggcagccagcaggcagctgcaggtggatgaagtggagaaagcagctgtg
gagctgctaaagggaagagaaacactgcagggcacaagaactggctctgcccctctggac
acctcagctgtggcaccaggcagatccccagggctcgggggatctccctcccagaagacc
atcactgccactcgcctctga

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