Molothrus ater (brown-headed cowbird): 118696366
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Entry
118696366 CDS
T11569
Symbol
SNTG1
Name
(RefSeq) gamma-1-syntrophin isoform X1
KO
K24065
gamma-syntrophin
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mate04990
]
118696366 (SNTG1)
Domain-containing proteins not elsewhere classified [BR:
mate04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
118696366 (SNTG1)
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Motif
Pfam:
PDZ
Syntrophin_4th
PH
PDZ_6
CBM_17_28
Motif
Other DBs
NCBI-GeneID:
118696366
NCBI-ProteinID:
XP_036254406
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Position
1:112127484..112447125
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AA seq
566 aa
AA seq
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MDFRTACEETKTGVCLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTI
RRQTVGGFGLSIKGGAEHNIPVVISKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
VFDRWRRKRKGEWTLYNFSIVSSVGLFQPDTWRFPDGPPHTSQPLVWYSMVQVLRNAGEE
VTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHPNNTDTLSCSSW
PASPGLRWEKRWCDLRLIPLLHSRFSQYLPGSDLCRQNAFQVIAVDGVCSGIIQCLSAED
CIDWLQAIASNISNLTKHNIKKINRNFPVNQQIVYMGWTEEREQDSLQDRMYTPKFLALR
GSSLYKFIAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKHCFSVQSESGEDLYFS
VELESDLTLWEKAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSMGFVCFDAATKAVL
WRYKFSQLKGSSDDGKSKIKFLFQNQDTKQIEAKELEFSNLFAVLHCIHSFFAAKVACLD
PLYVGSQATASAAPTTSGTGKLKYST
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaggaccgcctgtgaagagacaaagacaggggtttgtttgctgcaggatggt
aaccaggagcctttcaaagtgcgactgcacttagccaaagatattttgatgatccaggag
caggatgtgatctgtgtgtctggtgagcctttctattctggtgaaagaacagtaacaatt
agaagacagactgtaggaggatttggattaagtataaagggtggagcagaacataatatt
ccagtggtcatttctaagatttccaaagaacaaagagcggaactttcaggtttgctcttt
ataggagatgcaattctacagattaatggaattaatgtgagaaaatgcaggcatgaagaa
gtgtttgatcggtggaggaggaagaggaaaggagaatggactctatataatttttcaata
gtatccagtgttggcctgttccagccagatacatggaggtttccagatggcccaccccat
acttctcaaccactagtatggtacagtatggtacaggtccttcgcaatgcaggggaagaa
gtgaccctaactgtgtcctttctgaaaagagcacctgcttttctcaaactgccactgaat
gaagattgtgcatgtgcccccagtgaccaaagcagtggcacatcctctcccctatgtgac
agtggtttgcatctcaactaccaccccaacaacacggatacgttgtcatgttcctcatgg
ccagcgtccccaggacttaggtgggagaagaggtggtgtgatcttcgattaattccactt
cttcattcacgattttcccagtaccttccaggatcagatttgtgcaggcaaaatgcgttc
caagtaattgctgtggatggggtttgcagtggaataattcagtgtctctctgctgaagac
tgtattgactggctacaagcaatagcaagtaacatttccaacctcacaaagcacaatatt
aaaaaaatcaacaggaattttcccgtaaaccagcagatagtctacatgggctggacggaa
gaacgggaacaagactcccttcaggaccgaatgtacacaccaaagtttctagcgctgagg
ggatcttccctgtataaatttatagcacctccagtcacaacctgggattggacacgagct
gagaaaacattttcagtttatgagataatgtgcaaaattctcaaggacagtgatctactg
gaccgtcggaaacattgcttcagtgtccagtctgaatctggagaagatctttacttttct
gtggaactagagtctgacctaacactatgggaaaaagccttccaaacagcaactttttta
gaagttgaacggatacagtgcaagacatatgcctgtgttttagagagtcatcttatggga
cttaccatcgacttcagcatgggctttgtttgttttgatgctgccacaaaggctgtgctt
tggaggtacaagttttcccagctcaaaggttcttcagatgatgggaagagcaaaatcaaa
tttttgttccaaaaccaagatactaaacaaatcgaagcaaaggagctggagttttctaac
ctgtttgcagtccttcactgtatccactcattctttgcagccaaagtggcttgtttggac
cctttgtatgtaggcagccaagccacagcttctgctgctcccacaacttctggtactggc
aaattaaagtattctacttga
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