Molothrus ater (brown-headed cowbird): 118696372
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Entry
118696372 CDS
T11569
Symbol
ZBED1
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mate03000
]
118696372 (ZBED1)
04121 Ubiquitin system [BR:
mate04121
]
118696372 (ZBED1)
Transcription factors [BR:
mate03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
118696372 (ZBED1)
Ubiquitin system [BR:
mate04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
118696372 (ZBED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
ZBED1_RNase-like
ZBED1_RNase-like_helical
hAT-like_RNase-H
PRRSV-NSP11_N
RE_MjaI
Motif
Other DBs
NCBI-GeneID:
118696372
NCBI-ProteinID:
XP_036254449
UniProt:
A0A7L3V399
LinkDB
All DBs
Position
2:complement(35392918..35447340)
Genome browser
AA seq
695 aa
AA seq
DB search
MENKSLEGSPSDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKIKPESSQQVVQDSLIMKTYQNYEN
KKHQELTSAVISLICEGMYPASIVDEPTFKALLRTADPRYELPSRKYFCTKAIPEKYSAI
REIVLKELTEVLWCGISTDMWRSENQNRSYVTVAVHFLSSSPANCLAVNSRCLKTFEVPE
DNTAETITRVLYETFIEWGINTKVFGATTDYSKDIVKACSLLDIPVQMPCLGHTFNAGIQ
QAFQLPKLCNLLARCRKLVEYFQQSTVAMYMLSEKQKQQNILHCMLVSDRVSWWGSTLAM
LQRLKEQQFVIAAVLVEDSNNHHLMLESSEWNTIEGLVELLQPFKQVAEMMSASKYPTIS
MVKPLLHMLLNTTLNIKENDLKEISMAKEVIAKELSTTYQHTPEIDMFLNVATFLDPRYK
KLPFLSAFERQQVENRVVEEAKSLLEKVKENSFRTEEKFFTVSEEPPMKKIIISSTPPPT
SVINNMLAEIFCQTGGVEDQEEWHAQIVEELSNFKSQKVLGLNEDPLKWWSDRLALFPVL
PKVLQKYWCILATRVFPERLFGSSANVVSAKRNRLAPAHVDEQIFLYENSRNGSEAEPED
EDEGEWGLEQEQIFNLNDSVNMNNSFFNIRDSGFV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaaagtttagaaggttccccatcagacctaaagttagtggctcacccgaga
gcaaagagtaaagtgtggaagtactttgggtttgataccaatgcagaaggatgcatatta
cagtggaagaagatctactgccgtatttgcatggcacagattgcctattcaggaaacacg
tccaacctttcctaccaccttgaaaagaatcaccctgatgaattctgtgagtttgtgaaa
agcaacactgagcaaatgagggaagcctttgccacagcattttcaaaaatcaagccggag
tcatcacagcaggttgttcaagatagcctcatcatgaagacctaccagaactacgaaaac
aaaaaacatcaggaactgacatctgcagtcatcagcttaatttgtgagggcatgtatcca
gcctccatcgtcgatgaacctaccttcaaggccctcttgagaacagcagaccccaggtat
gaacttccgagccggaagtacttctgtacaaaagcaattcctgaaaagtacagtgctatt
agagaaattgtgctgaaagagctcactgaggttctctggtgtggtatatccacggacatg
tggaggagtgaaaaccagaacaggtcatatgtaactgtggcagttcactttctcagcagc
agtcctgccaactgcctggctgtgaactcacggtgtttgaaaacgttcgaagtaccggag
gataacactgcagagaccattacacgagtcctttatgaaacattcattgagtgggggatc
aatacaaaagtctttggtgctacgacagattacagtaaagacattgtaaaagcttgctct
ctcttagatattcccgtacagatgccttgtttggggcacacttttaacgcaggaatacaa
caagcttttcagctccccaaactctgcaaccttcttgccaggtgccgaaagctggtggag
tattttcagcagtctacggtcgcaatgtacatgctgagcgaaaagcagaagcagcagaat
attctccactgcatgctggtaagcgaccgtgtttcctggtggggaagcacgctcgctatg
ctgcagcgcctcaaggagcagcagtttgtcattgcggctgttctcgtggaggacagcaac
aaccaccacctcatgctggaatccagtgagtggaatacaatcgaagggctggtggagctg
ctccagcctttcaagcaggttgcagagatgatgtctgcttcaaagtacccgacgataagt
atggtaaagccccttctccacatgcttctgaataccactctgaacatcaaagagaacgat
ttgaaagaaatcagcatggcaaaggaggtgattgctaaagagttgtcaaccacctaccag
cacacacctgagatagacatgtttctcaatgttgcaactttcttggatccccgctacaag
aaactgccttttctttcagcttttgagaggcagcaggtggaaaacagagtggtggaagaa
gcaaaaagcctgctggagaaagtaaaagaaaatagttttagaactgaggagaaattcttc
actgtttcagaagagccccctatgaaaaaaatcataatctcctctactcctcctcctacc
agtgtcatcaacaatatgcttgcagagatcttttgccagacaggaggcgtggaagaccag
gaggaatggcatgctcaaatcgttgaggagttgagcaacttcaagtcacaaaaggtcctc
ggtttgaatgaagacccgttgaagtggtggtctgacagactagcactgtttccagtttta
ccaaaggttcttcaaaaatactggtgtattctggccacaagggtcttccctgaacgcctt
tttggctcttctgctaatgttgtgagtgcaaagagaaaccggttagccccggctcatgtg
gatgagcagatctttttgtatgaaaatagtcgcaatgggtctgaggcagagccagaggat
gaagatgaaggagagtggggtttggaacaggaacagatttttaatttaaatgactcagta
aacatgaacaacagtttctttaatattcgagacagtgggtttgtttga
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