KEGG   Molothrus ater (brown-headed cowbird): 118696642
Entry
118696642         CDS       T11569                                 
Symbol
RAB5C
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
mate  Molothrus ater (brown-headed cowbird)
Pathway
mate04137  Mitophagy - animal
mate04144  Endocytosis
mate04145  Phagosome
mate04148  Efferocytosis
mate05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:mate00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118696642 (RAB5C)
   04145 Phagosome
    118696642 (RAB5C)
   04137 Mitophagy - animal
    118696642 (RAB5C)
   04148 Efferocytosis
    118696642 (RAB5C)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118696642 (RAB5C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mate04131]
    118696642 (RAB5C)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mate04147]
    118696642 (RAB5C)
   04031 GTP-binding proteins [BR:mate04031]
    118696642 (RAB5C)
Membrane trafficking [BR:mate04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    118696642 (RAB5C)
 Endosome - Lysosome transport
    118696642 (RAB5C)
Exosome [BR:mate04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118696642 (RAB5C)
  Exosomal proteins of other body fluids (saliva and urine)
   118696642 (RAB5C)
  Exosomal proteins of colorectal cancer cells
   118696642 (RAB5C)
  Exosomal proteins of bladder cancer cells
   118696642 (RAB5C)
GTP-binding proteins [BR:mate04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    118696642 (RAB5C)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 118696642
NCBI-ProteinID: XP_036254769
LinkDB
Position
27:complement(3679691..3692690)
AA seq 216 aa
MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNAPGGPGRNRVVDLQESSQPSRSQCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggtggagctgcccgaccgaatggaccagctgctgggaacaaaatctgc
cagttcaaacttgttctcctgggagagtcagcggtggggaagtccagcctggtcctgcgc
ttcgtcaaggggcagttccacgagtaccaggagagcacaattggagctgccttcctcaca
cagacagtgtgtctggatgacacaacggtgaagtttgagatctgggacacggcggggcag
gagcgataccacagcctggcccccatgtactaccggggggcccaggctgccatcgtggtc
tacgacatcaccaacacagacacatttgtacgagccaagaactgggtgaaagagctgcag
aggcaggctagccccaatattgtaattgcactagcaggaaacaaggcagaccttgctaac
aagagagctgtggacttccaggatgcacagacatatgcagatgacaacagcttgctgttc
atggaaacgtcagcgaagacagcgatgaatgtgaatgaaatcttcatggcaatagccaag
aaactgccaaaaaacgaaccccagaacgctcctggtggcccgggcaggaatcgggtggtg
gaccttcaggagagcagccagcccagcagaagccagtgctgcagcaactga

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