Molothrus ater (brown-headed cowbird): 118696704
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Entry
118696704 CDS
T11569
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
118696704 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mate03036
]
118696704 (HDAC5)
Enzymes [BR:
mate01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
118696704 (HDAC5)
Chromosome and associated proteins [BR:
mate03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
118696704 (HDAC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
118696704
NCBI-ProteinID:
XP_036254858
LinkDB
All DBs
Position
27:4801246..4819989
Genome browser
AA seq
1072 aa
AA seq
DB search
MDPQSDTEGGSGREPPLELLPRVPLHAALPAPACPAGPEGPEGPGPEAGVDAGLAAAREQ
QLQRELVALKQQQQLQKQLLFAEFQKQHEHLTRQHQVQLQKHLKQQQEALAARRQQELEQ
QRQRERQELEQQRLEQLQSLRPKERGRDSAIASTEVKLKLQEFLLSKTKEPGPGPPNHSL
PQHPKCWAHHTSLDQSSPPQTGSPGTPPSYKLPLLGTYDGRDDFPLRKTASEPNLKVRSR
LKQKVAERRSSPLLRRRDGSVLSAFRKRHVEITVSSVCSSAPGSGPSSPNSSHGAHNGLA
ASVPNIHSEQLLPQPRALALDGAQLSLYTSPSLPNLSLGLQATVTVTSAHLPVSPKLSPQ
AEGERPGVPPGVSPLRPGAALTGKFLSTSSIPGCLLGVALDGGDAPAGSPSLLQHVLLLE
QARQQSTLIAVPLHGQSPLVAAERAGAPRGGGSKLPRHRPLSRTQSSPLPQSPQALPHGP
LQQHFLDKQQLQLAKLLPKGAELARQPPTHPEETEEELTEQQSPPPGERGPPGPPLGPPI
ALVSPEAGDPPEQPQDPEGCQEPGDSGDEAEAPGDPDVTELGVTYKQVYPEAPLQLFPAP
PLGVLALPHAALARTQSSPASVKPPQPEGPPKHLFTTGVVYDTFMLKHQCTCGNTTIHPE
HAGRIQSIWSRLQETGLLGKCERIRGRKATLEEIQTVHSEHHALLYGTSPLNRQKLDSKK
LLGPITPKTYAVLPCGGIGVDSDTVWNELHSSSAVRTAVGCLLELAFKVAAGEVKNGFAV
IRPPGHHAEESTAMGFCFFNSVAISAKLLQQRLSVGRILIVDWDIHHGNGTQQAFYSDPH
VLYISLHRYDDGNFFPGSGAPEEVGSGLGVGYNINIAWTGGVDPPIGDVEYLTAFRTVVM
PIAKEFSPDLVLVSAGFDAVEGHLSPLGGYSVTAKCFGHLTKQLMMLAGGRVVLALEGGH
DLTAICDASEACVTALLGLELEPLDPALLQQKPNVNAVATLEKVIEIQSRHWGSVRRFAA
AVGRSLLEAQRGDTEEAETVTAMALLSVGAEHGRTEPQARPAEEPMEAEPTL
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggacccccagagcgacacagagggggggtccggccgtgagcccccgctggagctgctg
ccccgtgtccccctgcacgctgccttgcccgccccagcgtgtccggcagggccggagggg
ccggaggggccggggcccgaggcgggggtggacgcggggctggcggcggcgcgggagcag
cagctgcagcgggagctggtggccctgaagcagcagcagcagctccagaagcagctgctc
ttcgccgagttccagaagcagcacgagcacctcacccgccagcaccaggtccagctccag
aagcacctcaagcagcagcaggaggccctggcagcccggcggcagcaggagctggagcag
cagcggcagcgggagcggcaggagctggagcagcagcgcctggagcagctccagagcctg
cgccccaaggagcggggccgtgacagtgccatcgccagcacggaggtgaagctgaagctc
caggaattcctgctcagcaagacgaaggagccgggccctggcccccccaaccattccctc
ccccagcaccccaaatgttgggctcaccacacctcgttggaccagagttcccccccccag
accggcagcccggggacccccccgtcctacaagctccccctcctcggcacctacgacggc
cgggacgatttcccgctccgcaaaaccgcgtccgagcccaacctgaaggtgcgctcgcgg
ctgaagcagaaggtggcggagcggaggagcagccccctcctgcggcgccgcgacggctcc
gtgctcagcgccttccgcaagcgccacgtggagatcaccgtgtcatcggtctgcagcagc
gcccccgggtcggggcccagctcccccaacagctcccacggtgcccacaatggcctggcc
gcctctgtccccaacatccacagcgagcagctcctgccccagccccgcgccctggccctg
gacggggcccagctcagcctctacacgtccccatcgctgcccaacctgtccctggggctg
caggccactgtcaccgtcaccagtgcccacctccccgtgtcccccaagctgtcgccgcag
gcggagggcgagcggccgggggtgcccccgggggtgtccccgctgcgccccggggccgcc
ctcaccgggaagttcctgagcacgtcctcgatcccgggctgcctgctgggggtggccctg
gatgggggggacgccccggccgggtccccgtccctgctgcagcacgtgctgctgctggag
caggcgcggcagcagagcaccctcattgctgtgcccctgcacgggcagtccccgctggtg
gcggcggagcgggccggggctccccgcggcgggggcagcaagctgccgcggcaccggccc
ctgagccgcacgcagtcctcgccgctgccgcagagcccccaggcgctgccccacgggccc
ctccagcagcacttcctggacaagcagcagctccagctggccaagctgctccccaagggg
gcggagctggcccggcagccccccacccaccccgaggagacggaggaggagctgacggag
cagcagtcgccccccccgggggagaggggccccccaggcccccccctcggcccccccatc
gccctggtgtccccagaggccggggaccccccggagcagccccaggaccccgagggctgc
caggagccaggggacagcggggacgaggccgaggcccctggggaccccgacgtcacagag
ctgggggtcacctacaagcaggtgtaccccgaggcgccgctgcagctcttccccgcgccc
cccctgggggtcctggctctgccccacgccgccctcgcccgcacgcaatcgtccccggcc
agcgtcaaacccccccagcccgaggggccccccaagcacctcttcaccacaggtgtggtg
tacgacacgttcatgctgaagcaccagtgcacctgtgggaacaccaccatccaccccgag
cacgccggccgcatccagagcatctggtcccggctgcaggagacggggctgctgggcaag
tgtgagcggatccggggcaggaaggcgacgctggaggagatccagacggtgcactcggag
caccacgcgctgctctacggcaccagccccctgaaccgccagaaactggacagcaaaaag
ctgctgggtcccatcactccgaagacgtacgcggtgctgccgtgtgggggcatcggggtg
gacagtgacacggtgtggaacgagctgcactcgtccagcgcggtgcgcacggccgtgggc
tgcctgctcgagctggccttcaaggtggccgcaggggaggtcaagaatggcttcgctgtc
atccgccccccaggccaccacgccgaggagtccacggccatgggcttttgcttcttcaac
tccgtggccatctcggccaagctgctgcagcagcggctcagcgtgggcaggatcctcatc
gtggactgggacatccaccacggcaacgggacccagcaggccttctacagcgacccgcac
gtgctctacatctccctgcaccgctacgacgacggcaacttcttcccgggcagcggggcc
cccgaggaggtgggcagcgggctgggcgtgggctacaacatcaacatcgcctggaccggc
ggcgtggaccccccgatcggggacgtggagtacctgacagccttcaggacggtggtgatg
cccattgccaaggagttctccccggacctggtgctggtctccgccggcttcgacgccgtc
gagggccacctgtcccctctcggtggctactccgtcaccgccaagtgtttcgggcacctg
accaagcagctgatgatgctggccgggggccgggtggtgctggcgctggaggggggacac
gacctgacggccatctgcgacgcctccgaggcctgtgtcaccgccctgctcggcctcgag
ctggagcccctggacccggccctgctgcagcagaagccgaacgtgaacgcagtggccacg
ctggagaaggtcatcgagatccagagccggcactggggctctgtccggcgctttgccgcc
gccgtgggccggtccctgctggaggcgcagcgtggggacaccgaggaggccgagacggtg
acagccatggccctgctgtccgtgggggctgagcacggcaggacggagccacaggccagg
ccagcagaggagcccatggaggctgagcccacgctctga
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integrated database retrieval system
