Molothrus ater (brown-headed cowbird): 118697080
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Entry
118697080 CDS
T11569
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mate03000
]
118697080
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mate03310
]
118697080
Transcription factors [BR:
mate03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118697080
Nuclear receptors [BR:
mate03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
118697080
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Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118697080
NCBI-ProteinID:
XP_036255449
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Position
26:1521753..1538965
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AA seq
465 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQEQSGGAKDEPEPLSRV
YTTSVSSGLSDLDDISTLSDGLLFDFPLTPDGSSTYYNLDLLASAQPSPDQSSLDVADAT
LIKQESLYELMLEPALLAHGALEGAQLPPDISVLEIDRVAQNVVKSHLETCQYTTEELKR
LAWSLYSPEEVRALQSKSCEAMWQQCSLQISNAIQYVVEFAKRIDGFMELCQNDQIILLK
AGCLEVLLIRMIRAFNPLNNTVLFEGKFGGMQMFKSLGCDDLIGAVFELGRTLCRLQLSD
EELALFTAAVLLSPDRPWLTESKKVQKLQDKIYVALQHEIQKKHSAEDKLSKMVSKLPLM
KTICNLHLDKLEFFRLLHPETAMNFPPLYKEVFNSELQYSDPRES
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaggtgatcccgtgcaagatctgcggagacaaatcctcagggatc
cactacggtgtcatcacctgcgaaggctgcaagggtttctttcggaggagccagcagaac
aatgccagctactcgtgctcccggcaaaggaactgcctgatcgaccgcaccaaccgcaac
cgctgccagcactgccgcctgcagaaatgcctggcactgggcatgtcccgcgacgcggtg
aagttcggccgcatgtccaagaagcagcgggacagcctctacgccgaggtgcagaagcac
cagcagagccaggagcagagcggcggcgccaaggacgagcccgagcccctgagccgcgtc
tacaccacgagcgtcagcagcggcctctcggacctggacgacatctccacgctgtccgac
gggctcctcttcgacttccccctgacccctgatggcagcagcacctactacaacctggac
ctgctggcctcggcacagccctcgcccgaccagtccagcctggacgtggctgatgccacg
ctcatcaagcaggaatctctctacgagctgatgctggagccggcgctgttggcacacggg
gcgctggagggtgcccagctgccccctgacatctctgtcctggagattgaccgggtggcc
cagaacgtggtgaagtcccacctggagacgtgccagtacacaacggaggagctgaagcgc
ctggcgtggagcctctactcccccgaggaggtccgtgccctgcagagcaagagctgcgag
gccatgtggcagcagtgctcgctgcagatctccaacgccatccagtacgtggtggagttt
gccaagcgcatcgacggcttcatggagctctgccagaacgaccagatcatcctcctgaaa
gccggttgcctcgaggtgctcctgatccgcatgatccgcgccttcaaccccctgaacaac
accgtcctcttcgagggcaagttcggtggcatgcagatgttcaaatctctcggctgtgac
gacctcatcggtgccgtcttcgagctgggcaggaccctgtgccgcctgcagctgtcggac
gaggagctcgccctcttcactgctgctgtcctgctctccccagaccgcccgtggctgact
gagtccaagaaggtgcagaagctccaggacaagatctatgtggccctgcagcacgagatc
cagaagaaacactccgctgaggacaagctctcgaagatggtttccaagctgcccttgatg
aagaccatttgcaacctgcacttggacaagctggaatttttccgtctcctgcacccggag
actgccatgaacttcccccccctctacaaggaggttttcaactctgagcttcagtacagc
gacccccgggagagctaa
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