Molothrus ater (brown-headed cowbird): 118697329
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Entry
118697329 CDS
T11569
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X2
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118697329 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mate04040
]
118697329 (SCN8A)
Ion channels [BR:
mate04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118697329 (SCN8A)
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
ATP-synt_B
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
118697329
NCBI-ProteinID:
XP_036255816
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All DBs
Position
30:716964..764777
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AA seq
1978 aa
AA seq
DB search
MAARLLAPPGPESFKPFTPESLANIEKHIAELKKKQRSKQDSSHRDDDEDSKPKPNSDLE
AGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNL
FRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETFLDNGSRGF
DWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISK
LSSKSAKERRNRRKKRKDKELSEGDEKCDNEKVFKSESEDGMRRKAFRLPDNRLGRKFSI
MNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIP
IRGRDRRSSYSGYSGYSQGSRSSRIFPTLRRSIKRNSTVDCNGVVSLIGGPPSSMPGGRI
LPEGTTEIEIRKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPC
WYKFANTFLIWECHPYWMKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFE
HVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK
ECVCKINPDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMV
IGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAH
FKQREADEVKPLDELYDKKVNCIANHTGADINRDIDFLKNGNGTTSGIGSSVEKYIIDED
HMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDESSSSEGSTIDIKPE
VEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFET
FIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTN
AWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETAEHRFEIDVVNNKTECEALMPP
NSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYI
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINFVFV
IFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLA
RIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGI
DDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVG
IFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQF
IEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGEL
DILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVIQRAYRARLARRGFISRRPAA
TKLENGGANREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRREKAKRQKDGRAAKS
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcggctgctcgcaccaccaggccccgagagttttaaacccttcactccggag
tccctggccaacatcgagaaacacatcgcggagctgaagaagaagcagcgctccaagcag
gacagcagccaccgggacgacgatgaagacagcaaaccaaaaccaaacagtgaccttgag
gcgggcaagaatttgcctttcatctacggggacatccccaaagggctggttgctgtgcca
ctggaggactttgacccttattatatgacccagaaaacctttgtagtactaaacagaggg
aaaacactcttccgatttagtgccacacctgccttgtacattttaagtccttttaatctg
tttagaagaatagctattaaaattttgatacattcagtatttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaacccgccagaatggtcaaagaat
gtggagtacacattcaccgggatttatacgtttgaatcactcgtgaaaatcattgccaga
ggtttctgtatagatggcttcaccttcctgagggatccctggaactggctggatttcagc
gtcatcatgatggcgtatataacagagtttgtaaacctaggcaatgtttcagctctgcgc
actttcagggttctgagagctttgaaaactatttctgtaattccaggcttgaagaccatc
gtgggtgccctgatccagtctgtgaagaagctgtcggatgtgatgatcctgacagttttc
tgtctcagtgtctttgccctcatcgggctccagctgttcatgggcaatttaaggaacaag
tgtgtgatttggccaattaatgtgaacgagaccttcctggacaatggctccaggggcttc
gactgggaggaatacaccaacaatatgtcgaatttttacatcattcctggcgcccccgac
cctttgctctgtggtaacagctcagatgcaggccaatgcccagagggatacacgtgcatg
aaggcaggacggaaccccaactacggctacaccagctttgacaccttcagctgggctttt
ctggctttgtttcgccttatgactcaggacttttgggaaaacttgtatcagttaacttta
cgggcggcaggaaaaacctacatgatcttctttgtgctggtgatctttgtggggtccttc
tacctggtgaatctgattttggctgtggtggccatggcctacgaggagcagaaccaggcg
accctggaggaggcagagcagaaggaggcagaattcaaggccatgttggaacaattgaaa
aagcagcaggaggaagcacaggctgctgccatggtcacctcggcagggacggtgtctgaa
gatgctgtggaagatgatggtggggggaggatgtcccggagctcctcggagatctccaag
ctcagttccaagagcgccaaggagcggcggaacaggaggaagaagcggaaggacaaggag
ctgtcggaaggagatgagaagtgtgacaatgagaaggtgttcaagtcggaatctgaggat
ggcatgaggaggaaggcgttcaggctgccagataacaggctgggaaggaagttttccatc
atgaaccagtctctcctcagcatcccaggctcccctttcctctcccgccacaacagcaag
agcagcatcttcagctacaaggggcgtttccgcgacccgggctcggagaacgagtttgcc
gacgacgagcacagcacggtggaggagagcgagggcaggagggactcgctcttcatcccc
atccgcggccgcgaccggcgcagcagctacagcggctacagcggctacagccagggcagc
cgctcctcgcgcatcttccccacgctgcgccgcagcatcaagaggaacagcaccgtggac
tgcaacggcgtcgtgtccctcatcggggggccgccctccagcatgcctgggggccgcatc
ctgcccgagggtaccactgagattgaaattaggaagaagcctggtgggtctctcttggtc
tcgatggatcaggtgaatgcatcctatggaaggaaggatcggaccaacagtgtcatgact
gggttgaccaacacccttgttgaggagctggaagagtcccagaggaagtgtcccccttgc
tggtacaaatttgccaataccttcctgatctgggaatgccacccatactggatgaagctg
aaggagattgtgaacttaattgtcatggatccttttgttgacttggccatcaccatctgc
atcgtgctgaacacgttgttcatggccatggagcaccaccccatgacccccgagttcgag
cacgtgctctctgtaggaaatctggttttcactgggattttcacggcagaaatgttcctg
aagctcattgcaatggatccatactattattttcaagaaggctggaacatctttgatggg
tttattgtctccctgagtttaatggagctgagtctggcagatgtggagggactttccgtg
ctgcgatctttccgattgctgagagtcttcaaactggccaagtcctggcccactctgaac
atgctgataaaaatcattggtaactcagtgggtgccttggggaatttgaccttggtgctg
gccatcatcgtgttcatctttgccgtggtgggaatgcagctctttggcaaaagctacaag
gagtgtgtctgcaagatcaatccggactgtgagctaccccgctggcacatgcacgatttc
ttccactccttccttattgtcttccgtgtgttgtgtggggagtggattgagaccatgtgg
gattgtatggaagtggcaggacaggccatgtgcttgattgtcttcatgatggtcatggtc
atcggaaatttagtggtgctgaacctgttcttggccttgctgctgagctccttcagcgca
gacaacctggcagccacggacgacgacggggagatgaacaacctgcagatctcggtgatc
cgcatcaagaagggcattgcctggaccaaggccaaggtcagggagttcatgcaggcccac
ttcaagcagagggaggccgacgaggtgaagcccttggatgagctgtacgacaagaaggtg
aactgcatcgccaaccacaccggggccgacatcaaccgcgacatcgacttcctcaagaac
ggcaacggcaccaccagcggcatcgggagcagcgtggagaaatacatcatcgacgaggac
cacatgtccttcatcaacaaccccaacctcaccgtgcgcgtccccatcgccgtgggcgag
tccgacttcgagaacctcaacacggaggatttcagcagcgacacggatcctgatggcagc
aaggagaaactcgacgagagcagctcctccgagggcagcaccatcgacataaagcctgag
gtggaggaagtgcccgtggaggcaccggaggagtacctggaccccgatgcctgtttcaca
gagggttgcatgcagcgctgcaagtgttgtcaggtcaatattgaggaggggctgggaaag
tcgtggtggaccttgaggaaaacttgtttcctaattgtggagcacaattggtttgagact
ttcatcatcttcatgatcctcctgagcagtggggctctggcttttgaggacatttacatc
gagcagaggaaaaccatccggaccatcctggagtacgcagacaaggtcttcacttacatt
ttcatcctggagatgctgctcaagtggtgtgcctatggatttgtgaagttcttcaccaac
gcctggtgctggctggatttcctcatcgtggctgtctctttagtcagccttatagctaat
gccctgggctactcggaactaggtgccataaaatcccttaggacactaagagccttgagg
cctttaagagcgttgtcccgatttgaggggatgagggtggttgtcaatgccttggttggc
gctatcccttccattatgaatgtcttgttggtctgccttatcttctggctgattttcagc
attatgggggttaacctgtttgccgggaaatatcattactgctttaatgaaacagctgag
catcgctttgagatagacgttgttaacaacaagacagaatgcgaggctctgatgccaccc
aactccacggagatccgatggaagaatgtgaaaattaactttgacaacgttggggcagga
tatctggctctgctgcaagttgctacattcaagggctggatggacatcatgtatgcagct
gtagattccagaaagcaagaagagcagcccaaatacgaggacaacatttacatgtacatt
tattttgttatcttcatcatctttggctcctttttcaccctgaacttgttcattggtgtc
atcattgacaacttcaatcaacaaaagaaaaagtttggaggtcaagatattttcatgaca
gaagagcaaaagaagtactacaatgccatgaaaaaactgggctcaaagaagcctcaaaaa
cccattccccgacctctgaaccgcatccaaggagccgtcttcgactttgtcactcagcaa
gccttcgacatcgtcatcatgatgctcatctgcctcaacatggtgaccatgatggtggag
acagacacgcagagcaagcagatggaggacatcctttactggatcaactttgtgtttgtc
atctttttcacctgtgagtgcgtgctgaagatgttcgccttgaggcactactatttcacc
atcgggtggaacatcttcgacttcgtggttgtgattctgtccatcgtggggatgttcctg
gctgaaatcattgagaagtacttcgtgtcacccactctgttccgagtcatccgcctggct
cgcatcggccgcatcctgcgattgatcaagggagccaaggggatccgcacgctgcttttt
gccttaatgatgtccctgcctgccttgttcaacatcggcctcctgctcttcctggtcatg
ttcatcttctccatcttcggcatgtccaacttcgcctacgtcaagcacgaggccggcata
gacgacatgttcaactttgagacctttggcaacagcatgatctgcttgttccagatcacc
acctcggccggctgggacgggctcctgctgcccatcctgaaccggcccccggactgcgac
ctggacaaggagcacccgggcagcggcttcaagggggactgcgggaacccctcggtgggg
atatttttctttgtgagctacatcatcatctccttcctgatcgtggtcaacatgtacatc
gccatcatcctggagaacttcagcgtggcgacggaggagagcgcggacccgctcagcgag
gacgacttcgagaccttctacgagatctgggagaagttcgaccccgacgccacgcagttc
atcgagtacagcaagctggcggacttcgccgacgccctggagcatcccctgcgcgtcccg
aagcccaacaccatcgaactcatcgccatggacctgcctatggtaagtggggacaggatc
cactgtttggacatcctgtttgccttcaccaaacgtgtcctgggggacagcggggagctg
gatatcctgagacagcagatggaggagaggtttgtggcttccaacccttccaaagtgtct
tatgagcccatcaccaccacgctgcggcgcaagcaggaggaggtgtcggcggtggtgatc
cagagggcttacagggctcgtttggcacgacggggcttcatcagccggaggcctgccgcc
accaaactggaaaacgggggagccaacagggagaaaaaggagggcaccccctccacggcg
tccctgccgtcctacgacagcgtcaccaaacccgagaaggagaaacagcagcgggcggag
gagggcaggagagaaaaggccaagagacaaaaagacggcagggcggccaagtcttga
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