Molothrus ater (brown-headed cowbird): 118697360
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Entry
118697360 CDS
T11569
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118697360 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mate03021
]
118697360 (SMARCD1)
03036 Chromosome and associated proteins [BR:
mate03036
]
118697360 (SMARCD1)
Transcription machinery [BR:
mate03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118697360 (SMARCD1)
Chromosome and associated proteins [BR:
mate03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118697360 (SMARCD1)
PBAF complex
118697360 (SMARCD1)
GBAF(ncBAF) complex
118697360 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
DivIC
Motif
Other DBs
NCBI-GeneID:
118697360
NCBI-ProteinID:
XP_036255860
LinkDB
All DBs
Position
30:530737..537440
Genome browser
AA seq
511 aa
AA seq
DB search
MAARAGFQSGPASGGGAGAAPGAALGPGAPGGAVRMGPAPGQGLYRSPLPGAAYPRPGML
PGGRLAPQGPAMGPPGYGGSPAVRPALAQAGLDQARKRPAPQQLQQVQPQAVPNRNHNAK
KKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRI
FISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIEL
DKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARL
LGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHAL
LMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKI
HETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQ
PWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggccgggttccagtcggggcctgcgagcggcggcggcgccggggccgcg
cccggggccgcgctgggcccgggagcgccgggcggggcggtgcgcatgggcccggcgccg
gggcagggcctgtaccgctcgccgctgcccggagccgcctacccgcgccccgggatgctg
ccgggcggccgcctggcgccgcagggcccggccatgggtcctcccggctacggtgggagc
ccagccgtgcggcccgcgctggcgcaggccgggctggaccaggctcgcaagcggccggcc
ccgcagcagcttcagcaggtgcagccgcaggcggtgcccaaccgcaaccacaatgccaag
aagaagaagatggcagataaaatcctcccacagcggatccgtgagctcgtgcccgagtcc
caggcctacatggacctgctggccttcgagaggaagctggaccagaccatcatgaggaag
cgcctggatatccaggaggctctgaaacgccccatcaagcaaaagcgaaagctgcgtatt
tttatctccaacaccttcaaccccgccaagtcagacgcggaggatggcgaaggaaccgtc
gcctcctgggagcttcgggtggaaggacggctgttggaggattctgctctgtccaaatat
gatgccaccaagcagaaaaggaaattttcgtccttctttaaatctctggtcattgaactt
gataaagacctgtatggccctgacaatcacctagtagagtggcacaggactgctacgact
caggagacagatggcttccaggtgaagaggccaggggatgtgaacgtgcgctgcactgtc
ctgctgatgctggattaccagcctccccagttcaagctggatccgcgcctggctcggctg
ctgggcatccacacgcagacccggcccgtgatcatccaggccctgtggcagtacatcaag
acccacaagctgcaggacccccacgagcgggagtttgtcatctgtgacaagtacctgcag
cagatatttgagtcgcagcggatgaagttctcagagatcccacaaaggcttcatgccttg
ctgatgccccccgagccgatcatcatcaatcatgtgatcagtgttgacccaaatgaccag
aagaagacagcctgctatgacattgacgtggaggtggacgataccctgaaaactcagatg
aattccttcctgctctccacagccagtcaacaggaaattgctgctctggataacaagatc
catgaaacaattgagaccatcaaccagctgaagacacagcgcgagttcatgctgagcttt
gcccgagatcctcagggcttcatcaacgactggctccagtcccagtgccgggatttgaag
acaatgactgatgtcgttgggaatcccgaggaggagcgcagagctgagttctacttccag
ccgtgggcgcaggaagccgtgtgccgatacttctactccaaggtgcagcagagacggcag
gaactggagcaggccctgggcatccggaacacatag
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