Molothrus ater (brown-headed cowbird): 118697376
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Entry
118697376 CDS
T11569
Symbol
AAAS
Name
(RefSeq) aladin isoform X1
KO
K14320
aladin
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118697376 (AAAS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mate03019
]
118697376 (AAAS)
Messenger RNA biogenesis [BR:
mate03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118697376 (AAAS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
eIF2A
PD40
Tricorn_N
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
118697376
NCBI-ProteinID:
XP_036255882
LinkDB
All DBs
Position
30:125943..131932
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AA seq
516 aa
AA seq
DB search
MCSLGLFPPPPPPGDVTLYELNNALVCGRLSEQLPLAFQSQVPDLPVLTLPKEPLKAHGR
LEPSARPPFIHHRESLWKRCLSAWRDAGLCGLLRELASAEEEGLQWLRTGSSHALAVCRW
LSSLHGSLFPHLSLTSEDMIAAFSQAVDWAGCTVRAFAWHPHTNKFAVALLDDSIRVYNS
NSATVPSLKHRLQRNVAAMAWKPLCASILAVACQSCVLVWHLDPTSLSTRPSSGCAQVLS
CPGHSPVTSLAWAPSGERLLSASPVDTAMLVWDVSTETCVQLQWFGGGGVTYLAWSPDGS
KVLAATPSAVFRVWEAQMWTCERWPTIRGRCQTGCWSPDGSRLLFTVLGESVIYSLSFSE
YRGEMQGQVGGSKTASIVADLSETTFETLYGEERIGGEVHSMAWDPTGERLAVIIRGHPE
CAGSQPAVAVFRTRNSPVFELLPCGFVRGERGAQPQLISFHPCFPQGALLTVCWSSGRIS
HIPFFFISALEPRGSPRRSPAPVLGSVREQPLFSEL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtgctccctcgggctgttcccgccgccgcctccccctggggatgtcaccctgtacgaa
ctcaacaacgccctggtctgcggccgcctcagcgagcagctcccgctggccttccagagc
caggttcccgacctgcccgtgctgaccctgcccaaggagcccctcaaggcccacggccgc
ctggagcccagcgcccgcccgcccttcatccaccaccgcgagtccctctggaagcgctgc
ctcagcgcctggcgtgatgccgggctctgcgggctgcttcgggagctggccagcgccgag
gaggaggggctgcagtggctgcggacgggctcgagccacgcgctggccgtgtgccgctgg
ctgtcctcgctgcacggatccctgttcccacacctgtccctgaccagtgaggacatgatc
gcagccttctcccaggccgtggactgggccggctgcaccgtcagggcctttgcctggcac
ccccacaccaacaaattcgctgtggctcttctggacgattccatccgtgtctacaactcc
aacagtgccaccgtgccctcgctgaagcaccgcctgcagaggaacgtggctgccatggcc
tggaagccgctctgtgcctccatcctggccgtggcctgccagagctgtgtccttgtgtgg
cacctggaccccacctccctctccaccaggccatcatcaggctgtgcccaggtgctgtcc
tgccccgggcacagccctgtcaccagcctggcctgggcgcccagcggggagcggctgctg
tcggcgtcacccgtggacacggccatgctggtgtgggacgtgtccaccgagacctgtgtc
cagctgcagtggtttgggggtggcggtgtcacctacttggcctggtcccccgatggcagc
aaggtgctggcagccaccccctcggccgtgttccgggtgtgggaggcccagatgtggacc
tgtgagcgctggcccaccatcaggggacgctgccagacagggtgctggagccccgacggc
agccggctgctcttcaccgtgctgggcgagtccgtcatctactccttgtccttctccgag
taccggggggagatgcaggggcaggtgggaggctccaagacggcctcgatcgtggcagac
ctgtccgagaccacctttgagaccctctacggggaggagaggatcggaggggaggttcat
tccatggcgtgggaccccaccggggagaggctggctgtgatcatcagaggacaccccgag
tgcgcgggcagccagccggccgtggccgtgttccgcacccgcaacagccccgtcttcgag
ctcctgccctgcggcttcgtgcggggcgagcgcggagcccagccccagctcatctccttc
cacccatgcttccctcagggcgccctcctgaccgtgtgctggtcctcggggaggatctcc
cacatccccttcttcttcatcagcgccctggagccccgtggcagcccccgccgcagcccc
gcgcccgtgctgggcagcgtccgggagcagccgctcttctccgagctctga
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