Molothrus ater (brown-headed cowbird): 118697526
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Entry
118697526 CDS
T11569
Symbol
SPAM1
Name
(RefSeq) hyaluronidase PH-20
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate00531
Glycosaminoglycan degradation
mate01100
Metabolic pathways
mate04142
Lysosome biogenesis
Module
mate_M00076
Dermatan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
118697526 (SPAM1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
118697526 (SPAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
mate02042
]
118697526 (SPAM1)
00536 Glycosaminoglycan binding proteins [BR:
mate00536
]
118697526 (SPAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mate00537
]
118697526 (SPAM1)
Enzymes [BR:
mate01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
118697526 (SPAM1)
Bacterial toxins [BR:
mate02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
118697526 (SPAM1)
Glycosaminoglycan binding proteins [BR:
mate00536
]
Heparan sulfate / Heparin
Enzymes
118697526 (SPAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mate00537
]
Enzymes
118697526 (SPAM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_56
DUF4964
Motif
Other DBs
NCBI-GeneID:
118697526
NCBI-ProteinID:
XP_036256115
LinkDB
All DBs
Position
5:complement(21795904..21816402)
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AA seq
585 aa
AA seq
DB search
METVRQSFGICVTCTYPVATGVVFATLLLSCCSSLNIRARPLVSNSPFLSIWNAPTELCT
ERTGVQLDMNIFPLIGSTLKTSIGQNITLFYPDRLGYYPYKNEVTGEAFNGGLPQLSLLE
NHLKKAKEDIQFYIPSDEQLGLAVIDWENWRPVWIRNWGSKDIYRQESIELVQQRDLSLS
EAEARTIAKMEFEFAAKSFMLETLELGIETKPNRLWGYYLYPDCYNYDYKQNPHNYTGAC
LDIEIERNNELNWLWEKSTALYPSIYLETALKSSRNAQLFVRNRVQEAIRNSYVSNSSHP
LPVFVYTRPVFTDVYEEYLSEDDLVNTIGESAALGASGIVIWGDMNLTQNKNTCRTLDNY
LRRTLTPYLINVTMAARICSQVLCQDSGACARKKWNSSDYLHLNPENIAIQMTKDGKYTL
QGQPSYQDLQTFIEKFDCHCYAGHSCEPRADINDIHYLHACISEDICIQISSNSLSNIEG
SEEKILSNRTAFSLTSESKVTLSTHPEVDFQSTFGNNILNITTGEYNNTVTAASSYDLEE
NDTRTFISSSSYKIRMFSLFHLILLLRNLIQMIHESENILFLDYI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgtgagacaaagttttggcatctgtgttacctgtacataccctgtagcaact
ggtgtggtgtttgccactcttctactttcttgctgctcatctctgaacataagagctcgt
ccacttgtttctaattcacctttcctttctatctggaatgctcctacagaactttgtact
gaaaggactggagtgcagctggacatgaatattttccctctaattggaagtacactaaag
acatccattgggcaaaacatcactctcttctatccagacaggcttggatactacccttac
aaaaatgaagtcacaggagaggcattcaatggaggactccctcaactctcactgctggaa
aatcatttaaaaaaagccaaagaggacatccagttctacattccttcagatgaacagctt
ggattggctgtcattgactgggaaaactggagacctgtgtggataaggaactggggatca
aaagatatttatagacaggaatccattgagttagttcagcagagagacctcagtctatcc
gaagccgaagccagaactatagctaaaatggaatttgagtttgcagcaaaatcatttatg
ttggaaactttggagctgggcatagaaacgaaaccaaatcgtctgtggggatattacctt
tatccagactgttataactatgattacaaacaaaacccccacaattatacaggagcctgt
ttagatattgaaatagaacgaaataatgagcttaactggttgtgggagaaaagcacagca
ctttatccatctatctatctagagacagccttaaaatcttccagaaatgctcaactcttt
gttcgcaacagagttcaggaagccattagaaattcctatgtctctaactctagtcatccc
cttccagtttttgtatatacacgtccagtattcacagatgtctatgaggaatatctctct
gaggatgacctggtaaataccattggagaatctgctgcactgggtgcttctggaattgtg
atttggggtgatatgaatttaacacaaaataagaacacctgtagaactctggacaactac
ctcaggaggactttgaccccatacctcatcaacgtcacaatggcagccagaatatgtagc
caagtgctatgccaagactctggtgcttgtgcacggaaaaaatggaattccagtgactat
cttcacttgaaccctgagaatattgcaattcaaatgacaaaggatggaaaatacacttta
caagggcaaccatcatatcaggatctgcaaacattcatagaaaaatttgattgccattgt
tatgcagggcacagctgtgaacctagagctgacataaatgacatccattacctccatgct
tgcatttcagaagatatttgcattcagatatcctcaaattcactttctaacatagaaggc
tctgaagaaaagatcctgtctaacagaactgcattttcattaacctctgagagtaaggtg
acattatctacacatcctgaagtagatttccaatctacctttggaaataatatacttaat
ataacaactggagaatataataacactgttacagctgccagtagctatgatttagaagaa
aatgatactcgtactttcattagttcttcatcctataagataaggatgtttagtctgttt
cacttaattctccttttgagaaacttaatacaaatgatccatgaaagtgagaatatcctt
ttccttgactatatttga
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