Molothrus ater (brown-headed cowbird): 118697547
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Entry
118697547 CDS
T11569
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118697547 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mate03021
]
118697547 (SMARCD3)
03036 Chromosome and associated proteins [BR:
mate03036
]
118697547 (SMARCD3)
Transcription machinery [BR:
mate03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118697547 (SMARCD3)
Chromosome and associated proteins [BR:
mate03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118697547 (SMARCD3)
PBAF complex
118697547 (SMARCD3)
GBAF(ncBAF) complex
118697547 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
118697547
NCBI-ProteinID:
XP_036256150
LinkDB
All DBs
Position
1:complement(58124..133819)
Genome browser
AA seq
483 aa
AA seq
DB search
MATDEVTGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYVGSPSVRPGM
PQTVMETTRKRTAPQQVQQQQVQQQVQQQATQNRARSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKSDADDSDGSIA
SWELRVEGKLLDDLSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQV
KRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSAIIQALWQYIKTNKLQDSH
DKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACYDI
DVEVEDPLKGQMSSFLLSTANQQEITALDNKIHETIESINQLKIQRDFMLSFSKDPKGYI
QDLLRSQSRDLKVMTDVVGNPEEERRAEFYHEPWSQEAVSRYFYCKIQQRRQELEQSLGV
RNT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctacagatgaagttacaggaggggctcgcaaagctacgaaaagcaaactttttgag
tttctggtccatggggtgcgccctgggatgccatcaggagctcgaatgccccatcagggg
gctcccatgggtcctccaggccccccgtatgtcggaagcccctcggtgcgacccgggatg
ccccagactgtgatggaaacaacaagaaaacgcacggcaccacagcaggtccagcagcag
caggtgcagcagcaagtgcagcagcaagctactcagaaccgagctaggagtgccaagagg
aggaagatggctgacaaaattctccctcagaggatccgcgagctggttcccgagtcgcag
gcctacatggatctcttggcctttgagcgcaagctggaccagaccatcatgcggaagcgc
gtggacattcaggaggcgctgaagagaccaatgaagcaaaagcggaaactgagactttac
atctccaacacatttaatcctgcaaaatcagacgctgatgactctgatggcagcattgct
tcgtgggagctgcgcgtggaggggaagctcctggatgatctcagcaaacagaaacggaag
ttttcatctttttttaagagtttggttattgaactggacaaagatctgtatggacctgac
aatcatcttgtggagtggcacagaactcccacgacccaggagacggatggcttccaggtg
aagaggcctggggatgtcagcgtgcgatgcacattgctcctcatgttagactaccagccc
ccccagttcaagctggacccgcggctggcccgcctgctgggcatccacacgcagacgcgc
tcggccatcatccaggctctctggcagtacatcaaaacaaacaagctgcaggactcccac
gacaaggaatacattaactgcgacaagtacttccagcagatctttgactgtccacggtta
aagttttctgagattccccagagactcactaacctactgctgccgccagacccgatagtg
ataaaccacatcatcagtgttgaccccaacgatcagaagaagacggcgtgttatgacata
gatgtagaagttgaagacccattaaagggccagatgagtagttttcttctctcaacagct
aaccaacaggagataacagcattggataacaagattcatgagacaattgaatccataaat
cagctaaaaatacaacgtgattttatgctgagtttctccaaggatcccaaaggatacatc
caagaccttctccggtcccaaagcagggatcttaaggtgatgactgatgtggttggaaac
ccggaggaagagcgcagagctgaattttatcacgagccctggtctcaagaagctgtgagc
agatatttctactgcaagatccagcagcgccgacaggaattggagcaatctttgggagtg
cgtaacacataa
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integrated database retrieval system
