Molothrus ater (brown-headed cowbird): 118697560
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Entry
118697560 CDS
T11569
Symbol
PWP1
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mate03009
]
118697560 (PWP1)
Ribosome biogenesis [BR:
mate03009
]
Eukaryotic type
90S particles
Other 90S particles
118697560 (PWP1)
Pre-60S particles
Other pre-60S particles
118697560 (PWP1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_CAF1B_HIR1
EIF3I
WD40_RFWD3
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
118697560
NCBI-ProteinID:
XP_036256174
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Position
5:complement(52868534..52890007)
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AA seq
494 aa
AA seq
DB search
MSGPVPCAAWVRRGVAKETPDKVQLSEEELKGLIEEAQDRLGEGAGGSDEGQTAGDTNAP
VPGSSTKSSQNNDELSDHELDEYDLDNYDAEEYTGDLKLEDSLATLAVYGSNENDPYITL
KTTEQYEQEDFLIKPSDNLVLCGRVDKDCCSLEVHVYNHEEDSFYVHHDIILPAYPLSLE
WLNFDPNPDESTGNYVAVSNMTPVIDIWDLDIVESLEPVFSLGGKKEKKKKKKGKKSLSS
EGTEGHTDAVLDLSWNKQSRNVLASASADNTVILWNMAVGKPAASLTLHTDKVQTLQFHP
FETQTLISGSFDKSAVLYDCRNPQDSHRVWRFSGQVERVIWNHFSPCHFLASTDDGFVYC
LDARADKPLFTLKAHDEEVSGLQLSSQIKGCLVTSSADKYVKIWDILGDRPSLVHSRDMK
MGVLFCAACCPDFPFVFAFGGEREGLRVWDISKISAVNEVFGNRERLVLASANSVASSST
ASRSSNDLETAMES
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccccgtgccctgcgccgcctgggtgcggcgcggcgtggccaaggagacgccc
gacaaggtgcagctgagcgaggaggagctgaagggtcttatcgaggaggcgcaggatagg
ctgggggaaggtgctggtggcagtgatgagggccagacagcaggtgacacgaatgcaccc
gtgcctggcagcagcactaagtcttcccaaaacaatgacgagttgtctgatcatgaactg
gatgaatatgatttggacaattatgatgcagaggaatacacaggtgatttaaaacttgaa
gactctttggctactctggcagtatatgggagcaatgaaaatgatccttacatcactcta
aaaaccactgagcaatatgagcaggaggactttttgattaaacccagtgacaatcttgtc
ctttgtggcagagttgataaagactgctgtagtttggaggtccatgtttataatcatgaa
gaggactcattttatgtccatcatgacattatcttgcctgcttaccctctgagtctggag
tggttgaattttgatcctaatccagatgaatcaacagggaattatgttgcagtgagtaac
atgaccccagtcattgacatttgggaccttgatatagtagaatccttggaaccagtcttt
tctcttggaggcaagaaagagaaaaagaagaaaaagaaaggaaagaaaagtttatcttca
gaagggactgaaggacatactgatgctgtgcttgatctttcatggaataaacaaagcagg
aatgttttagcaagtgcctctgctgacaacacagtgattttgtggaacatggctgtgggt
aagccagcagccagcctgacactgcatacagacaaggtccagacattgcagtttcatccg
tttgaaactcagaccctcatttctggatcatttgataaatcagcagtgctgtacgactgc
agaaacccccaggacagccatcgagtgtggcggtttagtggtcaggttgagagagtaatt
tggaatcatttctcaccttgccatttcttggcaagcacagacgatggctttgtgtactgt
ctggatgctcgtgctgataagcccctgtttactctgaaagctcacgatgaagaggtgtca
gggctacaactaagcagtcagatcaaagggtgccttgtgacatcatctgctgacaaatat
gtgaaaatttgggatatcctgggagacagaccaagtttagtccattccagggatatgaaa
atgggagttctgttctgtgcagcttgctgccctgacttcccctttgtctttgcctttgga
ggagagcgggaagggctgcgtgtttgggatataagcaagatctctgcagtgaacgaagtt
tttggaaacagagagaggctcgtcctggctagtgcaaactctgtggcttctagctccaca
gccagcagaagcagcaatgatttggagacagcaatggaatcatga
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