Molothrus ater (brown-headed cowbird): 118697580
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Entry
118697580 CDS
T11569
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118697580 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mate03019
]
118697580 (DCP1B)
Messenger RNA biogenesis [BR:
mate03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118697580 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
118697580 (DCP1B)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
118697580
NCBI-ProteinID:
XP_036256217
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All DBs
Position
5:complement(67557586..67597760)
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AA seq
598 aa
AA seq
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MAAALGRGLDISLAALRQHDPYISGIVDVASQVALYTFGHRASQWEKTDVEGTLFVYTRS
ASPRHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRIAE
LMKNLTQQEQFKAQQGTGTGVSPMIMNSANNKEVDILRMLTKAKDEYTKCKTCSEPKQIT
SSSAIYNNPNLIKPIPVKPSENQQQRISQQSKSADPEPQHLSLTALFGKQDKADGSEALP
RQHQESLPARQGVVRSLSYEEPSRHSPSAEKQLCPAIQKLMVRGTELHPLAELPESRLCE
NGSIPPVGETFTGLFQPVAAHGMATAHGAQDTAGTQSLLQKLQSQSGSVAKMEPSAAGAV
NSTASVFSRTPAPVGAPAAAPGNNMSQPPLVYFNGSLPGQTLEAQTLGKEQSKLPRQPLP
LSGNQAANSGVISPQELLKKLQIVQQEQQLHVSSRPTLAAKFPVVTQNTNTLKPLDSWIE
KAPGTEKQSTLFQVISPQRIPATVSPTLLMSPMVFTQPTPAPPKAAESGRLASAEPGSGS
LLLPLPAPEAAVPSSTSISKMQLQETLLRLIQNDDNFLNIIYEAYLFSVRKAAMKKPM
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgctgggccgggggctggacatcagcctggcggcgctgcggcagcacgac
ccctacatcagcggcatcgtggacgtggccagccaggtggcgctctacaccttcggccac
cgcgccagccagtgggagaagacagatgtggagggaacactgtttgtttacacaagatca
gcttctccaaggcatggtttcacaataatgaacagactgagcatggaaaaccgaacggaa
cccattactaaagacctcgatttccagctccaggacccttttctgctctacagaaatgcc
aggttgtccatatatgggatttggttttatgataaagaagaatgccaaagaattgcagag
ctcatgaaaaacctaactcagcaggaacaattcaaagcacagcagggcacaggaacaggg
gtgtcccccatgatcatgaattctgctaataacaaagaagtggatatcttaaggatgctt
accaaggccaaagatgagtataccaagtgtaagacctgctcagagccaaaacaaataacc
agttcctctgcaatctataacaaccccaacctaatcaaacccattccagtgaagccgagt
gagaaccagcagcagcgaatctcccagcagagcaagagcgcggatcctgaaccccagcac
ttatccttgacagcactgtttggcaaacaggacaaggcagatggctcagaagcgctcccc
aggcagcaccaggagagcctcccggccaggcagggcgtggttcgctctctgtcctacgag
gagcccagcaggcactcccccagcgccgagaagcagctgtgcccggccatccagaagctc
atggtgcggggcaccgagctgcaccccctggccgagctccccgagagccgcctctgtgag
aatggcagcatcccccccgtgggggagactttcacgggcctcttccagcccgtggctgcc
cacggcatggccacggctcacggagctcaggacaccgctggcactcagagcttactgcag
aaactgcagagtcagtcagggtcggtggctaaaatggagcccagtgccgcaggagctgtg
aactccacggcttccgtgttcagcaggactcctgctcctgttggagcgccagcagcagca
ccaggaaataacatgagccagccccctctggtgtacttcaatgggtccctaccaggccag
actttagaggctcagacgcttggtaaagaacaatccaaacttcccagacagccacttcct
ctctctggcaatcaagcggccaattctggggtgatttcacctcaagaattattgaaaaaa
ctccagatagtgcaacaagaacagcagctccatgtatccagcagaccaacattggcagct
aagttcccagttgttacccagaacaccaacaccctgaaaccactggattcctggatagaa
aaggctccaggcacagaaaaacagagcactctcttccaggtcatctccccgcagcgcatt
cctgccaccgtgagccccaccctgctgatgtcccccatggtgttcactcagcccacgcct
gctccgcccaaagctgccgagagcggccgcttggccagcgccgagcccggctcgggcagc
ctgctcctgcccctgcccgccccagaggcggccgtgcccagcagcacctccatctccaag
atgcagctgcaggaaacgctgctgcgcctcatccagaatgatgacaacttcttgaacatt
atttatgaagcatatctcttcagtgtgaggaaggcagcaatgaaaaagcctatgtga
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