Molothrus ater (brown-headed cowbird): 118697602
Help
Entry
118697602 CDS
T11569
Symbol
TCF20
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor 20
KO
K24769
transcription factor 20
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mate03000
]
118697602 (TCF20)
Transcription factors [BR:
mate03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
118697602 (TCF20)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Mua
Motif
Other DBs
NCBI-GeneID:
118697602
NCBI-ProteinID:
XP_036256243
LinkDB
All DBs
Position
5:48570502..48636970
Genome browser
AA seq
1938 aa
AA seq
DB search
MQSFREQSSYHGNQQSYPQEVHTSSRLEEFSPRQQAQMFQSFGGGAGSGRRGATGASTAM
PGESSGHQSYQGFRKEAGEFYYMAANKDPVVSGGQQPPQRRPSGPVQSYGPPQGSSFGSQ
YGSEGHVGQFQTQHSTLGGVSHYQQDYTGPFSPGSAQYQQQASSQQQQVQQLRQQIYQSH
QPLPQASSQSASSTSHLQPMQRPSTLPSSASGYQLRVGQFSQHYQPPSSSSSSSFPSPQR
FGQSGQNYDGSYNVNSGSQYEGHAVGSNAQAYGTQSNYSFQTQPMKSFEQSKLPQSGQQG
QQQQHPPQHVMQYSNAATKLSLQSQVGQYSQTEVPVRSPMQFHQNFSPISNPSPAASVVQ
SPSCSSTPSPLMPGGENLQCGQGNMSMGSRNRILQMMPQLSPTPSMMPSPNAHASGFKGF
GLEGLQEKRLTDPGLSSLSALSSQVANLPNTVQHMLLSDALAPQKKSSKRSSSSKKADSC
TNSEGSSQAEEQLKSPMAESLDGGCSSSSEDHGERVRQLSGQSTSSDTTYKGGNLERPNS
SPAQGSQNEPSKLSSSPAAREDVASPDGKEAVVAVENAPKVNEKAVGVIVSREAMAGRVE
KSGGQDKPAQDDASTAPQAPASTSGAKEAGHAGTQQETQGGGKGSKSGDNTNHNGEGNSQ
PGHAVVGPNFPARTESSKSPGSLRYSYKDNIAPGIQRSMGGFPQYPSGQEKGDFPGHSER
KGRNEKFPSLLQEVLQGYHHHPDRRYSRNAQEHSGMAGSLEGAMRPNVLISQTNELTNRG
LLNKSMGSLLEGPHWGPWDRKSSSAAPDMKQINLADYPIARKFDVESQSAAHEAGALSER
RSVICDISPLRQLVRDPGPHPIGHMGPEARSGRSERLAPGLSQSVILPGGLVSMETKMKA
HSGQIKEEDFEQSKSSASLNNKKTGDHCHPAGIKHESFRGNASPGAAVSDAAPDYMPQQD
NRSTQMRRGPGRTGRGKSPSQYQDLADKLKMSPGRSRGPGTDLHHMNPHMTLSERVSRGS
LHSVYPQNSEGPSLASAYHTNARPHAFGDPNQSLNSQYHYKRQIYQQQQEEYKDWASSAA
QGVIAAAQHRQEGARKSPRQQQFLERVRSPLKNDKDGMMYLQGSSYHDTGSQEAGRCVMG
SDSTQSKCTELKHGSQKLQHHESGWDLSRQTSPAKSSGPLGAANQKRFXPSESDGHRREE
SADLPKPSNAMLRLPGQEDQSPQNPLIMRRRVRSFISPIPTKRQPHDMKNSGSDDKGRLM
TSAKEGADKTYNSYAHSSQSQDAGKSVAKGDSFKDLPSPDNRNCPAVSLTSPAKTKILPP
RKGRGLKLEAIVQKITSPNIRRSVSTNSAETGPDTVTLDDILSLKSGPEGGNVAGHGPEA
EKRKGEIPDQVGPASQDTSGEKTVPRSSEEWQSSEDDKNKKEVXPETASIGKEGAGSSAA
PPPSQKSGGQGRSDGSVSGAGNLTFSDSKTISPSSVFISEPNPKSEEKDGDVTNISPKPD
GFPPKGYFPSGKKKGRPIGSVNKQKKQQQQQQLPAPPPPPPAPSQPAEVVGAGEPKPKRQ
RRERRKPAAQPRKRKPRRAAPIVEPQEPEIKLKYATQSVDKTDSKNKSFFPYIHVVNKCE
LGAVCTIINAEEEEQNKLVRGRKGQRSSTPPPSNAESKVLPTSTFMLQGPVVTESSVLGH
LVCCLCGKWASYRNMGDLFGPFYPQDYAATLPKNPPPKRATEMQSKVKVRHKSASNGSKT
DTEEEEEQQQQKEQRSLAAHPRFKRRHRSEDCSGASRSLSRGASCKKASTDGGSGGEKTP
LDSKPSMPTSEGGTELELQIPELPLDSNEFWVHEGCILWANGIYLVCGRLYGLQEAVEIA
REMKCSHCQEPGATLGCYNKGCSFRYHYPCAIDADCLLNEENFSVRCPKHKPLLPCSFPS
LQNKMVKGSLSTEQSERG
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgggagcaaagtagttatcacggaaaccagcagagctacccgcaggaa
gtgcacacttcatcccgactggaagagttcagcccccgccagcaggcccagatgttccag
agctttggaggaggtgctggcagtggacgtcgtggagcaacaggagcctctacagcaatg
cctggtgagagctctggccatcagagctaccaaggtttcagaaaagaagcaggagagttt
tactatatggctgccaacaaagatccagtggtatcaggagggcagcagccgcctcagcgc
aggccttctggaccagtacagagctatgggccccctcaagggagtagctttgggagtcag
tatgggagtgagggacatgtgggccagttccaaacacagcactcgacccttgggggtgta
tcccactatcaacaggattatactggtcctttttctccagggagtgcccagtatcagcag
caggcttctagccagcagcagcaggtgcagcagctgagacagcagatctatcaatctcat
cagcctttaccccaggcttccagccagtctgcttctagcacctcacacttgcagccaatg
cagcgtccatccaccctgccttcctctgcttcaggctaccagttacgagtgggtcagttc
agccaacactatcagccaccttcgtcatcctcctcctcctctttcccttccccacagcgt
tttggccagtcaggacagaattatgacggaagctacaacgtgaattctgggtcgcagtac
gaaggccatgctgtgggttccaatgcacaggcctatggcacccagtcaaactacagcttt
caaactcaaccgatgaaaagctttgagcagtctaagctgccccaaagtgggcagcagggg
cagcagcaacagcacccacctcagcacgtaatgcagtattcaaatgctgccaccaaactc
tctcttcaaagtcaagtgggacagtacagccagactgaagttcctgtaaggtcaccgatg
cagttccaccaaaacttcagtccaatctctaatccatctcctgctgcatctgtggttcag
tctccaagctgcagctctaccccttctccactcatgccaggtggagaaaatctccagtgt
gggcaaggcaacatgtccatgggttctcgaaaccgaatcctgcagatgatgcctcagctt
agtcctacaccatctatgatgccaagccccaatgctcatgcgagtggattcaaggggttt
ggactggaaggactgcaggaaaaaaggctcacagatccaggactgagcagcctgagtgct
ctaagttctcaagttgccaatctgcccaacacagtccagcacatgttgctctcagatgct
ttggcacctcagaaaaaaagttccaaaagatcatcctcttccaagaaggctgacagttgc
accaactcagaaggctcctcccaggcagaggagcaactcaagtctcctatggcagagtcc
ctggatggtggctgttccagtagttctgaggatcatggggaaagggtgagacagctgagt
ggccagagtaccagctcagacaccacttacaaagggggtaatttagagagacctaactcc
tcaccagcacaaggttctcagaatgagccatcaaaactcagcagcagtcctgcagctagg
gaggatgtggcctcccctgatgggaaggaagctgtggtggctgtggaaaatgccccaaaa
gtgaatgaaaaggcagttggggtgattgtctcccgggaagccatggcaggaagagtagaa
aagtcaggtggacaagataaacctgcacaagatgatgcttccacagcccctcaggcacca
gctagcactagtggagcaaaagaagctgggcatgcagggacacagcaagagactcaagga
ggaggtaaagggagcaaaagtggtgataacactaaccataatggggaggggaacagccag
cctggtcatgcagttgttgggccgaattttcctgcaagaacagaatcttccaagtctcct
ggcagtttaagatacagctacaaggataatatagcacctggtatacagagaagtatgggt
ggctttccacagtatccatctggtcaagaaaagggggattttccagggcatagtgagcgc
aaaggccgtaatgagaagtttcctagtctcctccaagaggttttacaggggtaccaccat
catccagacagaaggtattctaggaacgcgcaggagcattctgggatggctgggagtttg
gagggagccatgagacccaatgttttaattagtcaaaccaatgaattgaccaatagaggc
ctcttaaacaaaagcatggggtccctcctagagggccctcactggggtccctgggatagg
aagtctagcagtgcagctccagacatgaagcagataaatttagctgattaccctattgct
agaaagttcgatgtggagtctcagtctgctgcccatgaggcaggagcactctcagagagg
agatcagtgatctgtgacatatccccattaaggcaacttgtaagagatcctggccctcac
cccatagggcacatgggtcctgaggccagaagcggaaggagtgaacgtcttgcccctggc
ttgagccagtcagtaatactccctggtggtttagtatccatggaaacaaagatgaaagct
cacagtgggcaaataaaggaagaagattttgaacagtcaaagagctcagctagtctcaac
aataaaaaaacaggagaccattgtcatcctgctggcatcaaacatgaatcttttcgaggc
aatgccagccctggagctgcagtctccgatgctgctccagactacatgccccagcaggac
aacagatcgacacagatgagacgaggacctggcagaactggaaggggtaaatcaccctct
caatatcaggatcttgctgataagctgaaaatgtcaccaggcagaagcagaggcccgggg
acagatctgcatcacatgaacccacacatgacactatctgaaagagttagcaggggttcc
ttgcattctgtctaccctcagaattcggaaggcccatctctggcttcagcatatcacacg
aatgctaggcctcatgcttttggtgaccccaaccagagtttgaattcccagtatcattac
aagagacagatataccagcaacagcaagaagaatacaaagattgggcaagcagcgctgct
cagggtgtgattgctgcagctcagcacaggcaggaaggagcaaggaagagcccaagacaa
cagcagtttctggaaagagtaaggagtcccttaaaaaatgacaaggatggaatgatgtac
cttcaaggtagctcttaccatgatactggaagccaggaagctgggcgctgtgtcatgggg
agtgacagtactcagagcaaatgcaccgaactgaaacatggcagccagaagttgcagcat
catgaatctggttgggacctctctcggcaaacttctcctgccaaaagcagcggccctctt
ggagcagccaaccaaaaaagattgccctcagaaagcgatgggcatcgacgagaggaatct
gcagatttgcccaagcctagtaatgctatgcttaggctccctggccaggaggaccagtct
ccgcaaaacccgttaattatgaggaggagggtccgttctttcatctctccgatccctacc
aaaaggcagccacatgatatgaagaacagtggcagtgatgataaagggcgactgatgact
tcagcaaaagaaggagctgataaaacatacaactcctatgcccattcatctcaaagccaa
gatgctggcaagtcagttgcaaagggagattccttcaaggacctgccaagtcctgataat
aggaattgtcctgctgtttccctcacaagcccggcaaagaccaaaatattgcccccaaga
aaggggcgaggattaaaactggaagctattgttcagaaaattacatctcccaatattagg
agaagtgtttctaccaacagtgctgaaactggtccagatactgtcactcttgatgacatc
ctgtccctcaagagtgggcctgaaggaggaaatgtggctggacatggaccagaggctgag
aagagaaaaggagagataccagatcaagtggggccagcaagccaggatacaagtggtgag
aaaactgttccaagatcttcagaagagtggcaaagcagtgaggatgataaaaacaaaaaa
gaggtccctgaaactgccagtattggcaaagagggagcaggatccagtgcagcaccacca
ccttctcagaagtcaggtggtcagggaaggtctgatggatctgtaagtggagctggaaat
ctgaccttttctgactcaaaaacaatttccccttccagtgtgttcatttcagaaccaaac
ccaaagtctgaggaaaaagatggagatgtgacaaacatttcacccaagccagatggtttc
cctccaaagggatatttcccctctggaaagaaaaaagggaggccaattgggagtgtgaac
aagcagaagaagcagcagcaacagcagcagctgcctgcgcccccgcctcccccgccagca
ccatcacagcctgcagaagtggtgggtgctggtgagccaaagcccaagaggcaaaggaga
gagaggcgaaaacctgcagcgcagccacggaaacggaagcctagacgggctgctccaatc
gtggagcctcaagaaccagagatcaagcttaaatatgctacccagtccgtagataaaacc
gactccaagaataagtcctttttcccttatattcacgtggtaaacaagtgtgaattaggc
gctgtgtgcacaatcataaacgcggaggaagaggagcagaacaaattggtgaggggtcgg
aaaggacagaggtcttcaacaccccctcccagcaatgcagagagcaaagtgctgcccacc
tcaactttcatgctgcaaggccctgtagtaacggagtcttctgtcttggggcatctggtt
tgctgcctgtgtggcaaatgggccagctatcgtaacatgggtgacctctttggtcctttc
tacccccaggattacgcagctaccttgcccaagaatccacctccaaagagggccacagaa
atgcagagcaaggtcaaggtacggcacaaaagtgcttctaatggttccaagacagatact
gaagaggaggaggaacagcaacaacagaaggaacaaagaagcctggctgctcatccccgc
tttaagaggcggcaccgctctgaggactgtagcggagcctctcggtcactttcaagggga
gcttcttgtaaaaaagcatccactgatggtggcagtggtggtgaaaagactcctttggac
tcaaaaccgtctatgcccacttcagaaggtggcactgagctggagttacaaattcctgaa
ctacctcttgacagcaatgaattttgggtccatgagggttgtattctctgggccaatggg
atctacctggtctgtggcaggctctatgggctgcaggaagctgtggagattgcaagagag
atgaaatgttcccattgccaggaaccgggagccaccttaggctgctacaacaaaggctgc
tccttccgataccattacccatgtgccatcgatgcagattgtttactaaacgaagagaat
ttctcagtgaggtgccccaagcacaagcccctccttccttgctcttttccctccttgcag
aacaagatggtgaaaggcagcctcagcacagagcagtcggagcgggggtga
DBGET
integrated database retrieval system
