KEGG   Molothrus ater (brown-headed cowbird): 118697924
Entry
118697924         CDS       T11569                                 
Symbol
LAMB4
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-4
  KO
K06245  laminin, beta 4
Organism
mate  Molothrus ater (brown-headed cowbird)
Pathway
mate04510  Focal adhesion
mate04512  ECM-receptor interaction
mate04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:mate00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118697924 (LAMB4)
   04518 Integrin signaling
    118697924 (LAMB4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118697924 (LAMB4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMININ_IV_B EGF_LMN_ATRN LAMB4 LAMB1 Rod_CreS
Other DBs
NCBI-GeneID: 118697924
NCBI-ProteinID: XP_036256829
LinkDB
Position
5:complement(14850232..14893059)
AA seq 1808 aa
MRLGLAILIHLMLIRPQQAQHDCGAGSCHPALGDLLQGRSKQLTASSTCGMSSPQKYCIL
GYLEAEEKCFLCDSRYPYNPYTQHNSHMVENVITTFEPERKKKWWQSENGIDHVSIRLDL
ETLFQFSHLILTFKTFRPAAMLVERSTDFGQTWKVFRYFAHDCAASFPNISSGPAKSVGD
VVCDSRYSDIEPSTEGEVVLKALDPSFEIENPYVPYIQDLITLTNLRINFTKLHTLGDAL
LGRRHSDPLEKYYYAIYEMVVRGSCFCNGHASQCDSMQNLRGDVFHQSGMVHGRCICHHN
TEGFSCERCKDFYNDAPWRPAEGTQDNACKRCNCNSHSSRCHFDMAVYQASGGVSGGVCE
DCQDNTTGQHCDTCKPSFYQDPLKAISDPQPCLPCNCDPAGTLPEGVCERRTDPALGTVA
GRCPCKDNVEGARCDKCKANYHGLSSSDPLGCQPCNCDPLGTLPFSVCDPATGQCLCQRF
TTGQRCERCLAGYWGLGNSLYGCSPRCDCDIGGSQNNLCSPKDGQCECLPNIVSRQCNEP
APGFFFLPLDYYIYEAEHARPLSGSAPLVQPSTLPRCDIYFQKKGYEFMIENGKIVLNRD
KKRTVRKSGLEQGAMQFGQGSDLALVFRPPSAGRAVTWTGHGFARVPSGAGLRFAISNVP
FAMDFDITVRYEPEFLEDWLASVAIQPAGILSGQHCKNKVLSQEPHELHLPASKRIAILQ
TPVCLEPGTEYFVDVYFSQLSASDKKAKSFILIDSLGLIPRIGSVENLCSEKDLDEYQKY
HCIEIASEVGPHVLPEACARLIASLSARIHNGAVACKCNPQGSLNASCSKLGGQCQCKAN
VVGRCCDTCSAGSYGFGFHGCYACECHPQGSLSALCDQVTGQCSCRREVGGQRCSRCLPG
YFGFPHCRPCPCHGHAELCDPRTGECLDCRGFTAGSHCERCMDGYYGNPLDGEPCHPCMC
PGAPTSNRYFAHSCYQDSQSAQLVCNCLEGYSGNQCDKCPSGFYKNPSSPGLDCAPCPCN
NNIDLTDPESCNRVTGECTKCLHNTHGANCQFCKPGYFGSALNQSCQSCSCNLAGVQPAM
CPGGDAACLCDPATGACPCLPNVLGATCDQCASGYWDLASGKGCQTCDCDPKNSQSNQCN
QLTGQCPCKPGYSGRCCNECEENYFGNPQLHCVSCECNLEGTRQPTCDKATGACNCRAGV
TGRLCDQCARGFEKAFPSCPQCHLCFDQWDAEIAALAQTVQGLMRFAAKLEDKGGRMPSC
DMRFKAFEDAISEMERILRHPVLSLQALSGIRDFQGFLQQKVAQMDPLHSSPFEFPDLNK
SIEDIVEEANLVFELLQQKIHLHQSFQYLNFKEAISNIRKHSEVSLLAEQRTRGTSPVVR
HSEYTRNDTLAMLDHQLFDASSVLQQLRMIKSPDIQNLNEKICGVPGDQPCATAACGGAL
CQDSHGLRNCGGPDCSGALSLSSEAFRKAEETAVMLNNLTTQLQEPANQVKSIRKMAEDS
KLKGSRFNGQLETAINQIEVDGEITKEFIQKVKVFLLDESAPPEDIEKVANYVLQINLPL
TPQELAGMLGKLQSFMNHCEKYKLNNKRNIKGEDAQTLLVEAQEADKAAKALLPVDEINN
KLKNVVKSQGHSKSIIIKSNEEIQSIRTQISQAQNQVNKTNNELNDLSAKQTEMEDESAT
WQAKMLMNKNQATKARAEAEAAHKQAKKMENEFTDVKRKYTILQEKLKMRGPPKVTLEKV
KQLKEEAEKLAEETEKKIKRITDLEKKLQELNQTKQDKAEQLRQLEEQVLAIKNEIMEQE
SKYATCKS
NT seq 5427 nt   +upstreamnt  +downstreamnt
atgaggctggggctggccatcctgatacacctcatgctgataaggccccagcaggcacag
catgactgtggggctgggtcctgccacccagcccttggggacctcctccagggccgcagc
aagcaactgacagcctcgtcaacctgtggcatgagcagccctcagaagtactgcattcta
ggctacctagaggctgaagagaaatgctttctctgtgattccagatacccatataatccc
tatacccagcacaacagtcacatggtagaaaatgttatcacaacgtttgagcctgaaagg
aaaaagaagtggtggcagtcagaaaatggcattgaccatgtcagcattagattggaccta
gaaactttattccaattcagccatcttatcctgacctttaagacatttcggcctgcagcc
atgctggttgagcgctctaccgattttggtcagacctggaaagtgtttagatattttgca
catgattgtgcagcttctttccccaacatctcttctggtccagcaaaaagtgttggagat
gttgtttgtgattcaagatattcagacattgagccctccactgaaggcgaggttgtttta
aaagccttggatcccagctttgaaatagaaaatccatatgtgccatatatccaagatctc
attacattgacaaacctaaggatcaattttactaaactccacacccttggagatgctctg
cttgggaggaggcacagtgatccccttgagaagtactactatgccatctatgagatggtt
gtgaggggcagctgcttttgcaatggccatgccagccagtgtgattccatgcagaacctc
cggggagatgttttccatcagtcggggatggtccatgggagatgtatctgccaccataac
actgaaggtttctcttgtgaaagatgtaaagatttctacaatgatgctccctggaggcca
gctgaagggacacaagataatgcttgcaaacgttgtaactgcaacagccactccagcagg
tgccactttgacatggccgtgtaccaggccagcggcggggtcagcggtggcgtttgtgag
gactgccaggacaacaccaccggccagcactgcgacacctgcaaaccttccttctaccag
gatccgctcaaagccatctcagatcctcagccctgcctcccatgcaactgtgaccccgcg
gggaccttgcccgagggcgtgtgcgagcgccgcacggaccccgcgctgggcacggtggcg
gggcgctgcccctgcaaggacaacgtggagggcgctcgctgcgacaagtgcaaggcaaac
taccacgggctgagcagcagcgaccccctgggctgccagccctgcaactgtgatcccttg
ggcactttgcccttctccgtctgtgatcctgccacgggacagtgcctctgccagaggttc
accacagggcagcgctgtgaaagatgccttgcaggatactggggtcttggcaacagcttg
tatggctgttctccaagatgtgactgtgatattggtggatcccagaataacttgtgctcg
ccgaaggacggccagtgcgagtgtctgcccaacatcgtgagccgccagtgcaacgagcca
gctccaggattcttctttctgcccctggactattatatttatgaagctgagcatgcaagg
cccctttctggctctgcacccttggttcagccaagcactcttccaaggtgtgacatttac
ttccagaagaaaggctatgagttcatgattgaaaatggaaagattgtgttaaacagggac
aagaaacgaactgtaaggaaatctggactggagcagggtgcgatgcagtttggacagggc
tcggatctggcgctggtgttccggccgcccagcgctggccgggctgtcacctggacagga
cacggcttcgcccgcgttcccagcggagctgggctcagatttgccatcagcaatgttccc
tttgctatggactttgatatcacagttcgctacgagcctgagttcttggaagactggctt
gcaagtgttgccatccagcctgctggtatcttgtcgggtcaacactgcaaaaacaaggtc
ctttcacaggagccacatgagttgcatctcccagcttcaaagaggattgcaattctgcaa
actccagtctgcctggagccaggaacagaatattttgtggatgtgtatttttcccagctc
tctgcctctgacaaaaaggcaaaatcattcatcttgattgactcacttggacttattccc
agaatcggatctgtggagaacttatgcagtgaaaaggatttagatgagtaccagaagtat
cactgcattgaaattgcatctgaagttgggcctcacgtcctgcccgaggcgtgcgcgcgg
ctcatagcgagcctgtcagcccgaatccacaacggcgccgtggcttgcaagtgcaatccc
caagggtcgctgaatgccagctgtagtaagctgggaggccagtgtcagtgcaaggccaac
gtcgtggggcgctgctgtgacacctgctctgcaggcagctacggcttcggcttccacggc
tgctacgcgtgcgagtgccacccgcaaggctcgctgagcgcgctgtgtgaccaggtgaca
gggcagtgctcctgccgccgggaggtgggtggccagcgctgcagccgctgcctgcccggc
tacttcggctttccccactgccgtccctgcccctgtcatggccacgcggagctgtgcgac
cctcggaccggagagtgcctcgactgccgcggcttcaccgctggaagccactgcgagagg
tgcatggatggctattatggaaaccctctggatggagaaccctgccacccatgcatgtgc
ccaggagcacctacaagcaataggtattttgcacattcctgttaccaggactcccagtct
gcacagcttgtctgtaattgtctcgagggatattcaggcaatcagtgtgacaagtgtcct
agtgggttctacaaaaaccccagcagccctgggcttgactgtgcaccatgtccctgcaat
aacaacattgatttgacagacccagagtcctgtaacagggtcactggggaatgcaccaag
tgtttacacaacacccatggagcaaactgccagttctgcaaaccaggttattttggctca
gccctcaatcaaagctgtcaaagctgctcgtgcaatctggcaggtgttcagcctgccatg
tgcccagggggggatgcagcctgcctgtgtgacccagccacaggagcttgtccctgcctg
cccaatgtgctgggtgccacctgtgaccagtgtgcctctggctactgggacctggctagt
ggaaaaggatgtcagacctgtgactgtgatccaaaaaactcccaaagcaaccagtgcaac
cagcttacaggccagtgtccatgtaagccaggttacagtggaagatgctgtaatgaatgt
gaggaaaactactttggcaatccccagctgcattgcgtttcatgtgagtgtaacctggag
gggacccgccagcccacgtgtgacaaagccaccggcgcgtgtaactgccgggctggcgtc
accggccggctctgcgaccagtgcgcccgcggctttgagaaggcctttccctcctgccct
cagtgtcatctttgttttgatcagtgggatgctgaaattgcggctcttgctcagactgtg
caggggttaatgaggtttgcagcaaagctggaagataaaggaggacgaatgcccagctgt
gacatgcgcttcaaagccttcgaagatgccatttctgaaatggaacgcattttgagacat
cctgtcctttcactgcaggccctttcaggcatcagggattttcagggcttccttcaacaa
aaagttgcacagatggatccccttcacagttcaccctttgagtttcctgaccttaacaag
agcatagaagatatagtagaagaagccaacctagtgtttgaacttctacaacaaaaaata
catctgcatcaaagttttcagtacttgaatttcaaagaggccatcagcaacattaggaaa
cactctgaagtatcattgctggcagaacagaggaccagggggacaagccctgtggtaaga
cactcagagtacaccaggaacgacaccctcgcaatgttggaccatcagctctttgacgca
agcagtgtgctgcaacagctcagaatgatcaaaagccctgacatccaaaacctgaatgaa
aagatctgtggtgttccaggagaccagccatgtgccacagcagcttgtgggggagctttg
tgccaggacagtcatggactaaggaattgtggtggcccagactgcagtggagctctttct
ctctcctctgaggccttcaggaaagctgaggagactgctgtgatgctaaataacttgact
actcagctacaggaacctgcgaatcaggttaaaagcattagaaagatggcagaagacagc
aaactgaaaggctcacgatttaatgggcagctggagacagctatcaatcaaattgaagtt
gatggagagatcactaaggagttcatccaaaaagtgaaagtcttcttgttagatgagagt
gcacctccagaagacattgagaaagtggcaaattatgttctgcaaataaaccttcccttg
actccacaagagctcgcaggcatgcttggcaaactccagagctttatgaaccactgtgag
aagtacaaactgaataacaagagaaacataaaaggggaggatgctcagacactgctggtg
gaggcacaagaagctgacaaagcagctaaagctcttctgccagtggatgaaattaataat
aaactaaaaaatgttgtgaagtcccaaggacactccaaaagcatcatcataaagtcaaat
gaagagatacaaagcatcagaacacaaatctctcaggctcagaaccaagtgaacaagaca
aacaatgaactaaatgacttgtcagccaaacagactgagatggaagatgaaagtgccaca
tggcaggcaaaaatgctgatgaacaagaatcaagctacaaaggcaagagcagaggcagaa
gcagcccacaagcaagccaagaaaatggaaaatgaatttactgatgttaaaagaaagtac
accattcttcaagaaaagctaaaaatgcgaggacctccaaaagtgacactagaaaaagtg
aagcagttgaaagaagaagcagaaaaactggctgaagagactgaaaagaagataaaaaga
ataacagatttggagaagaagcttcaggaactgaatcaaactaagcaagataaagcagag
caactgagacaactagaggaacaagtgttagccattaaaaatgaaataatggagcaggaa
agcaagtatgcaacatgcaagagttag

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