Molothrus ater (brown-headed cowbird): 118698206
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Entry
118698206 CDS
T11569
Symbol
POC1B
Name
(RefSeq) LOW QUALITY PROTEIN: POC1 centriolar protein homolog B
KO
K16482
centriolar protein POC1
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mate03036
]
118698206 (POC1B)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mate03037
]
118698206 (POC1B)
Chromosome and associated proteins [BR:
mate03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
118698206 (POC1B)
Cilium and associated proteins [BR:
mate03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118698206 (POC1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
CFAP251_N
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR41
DSE1_N
ASA1
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_RIG_2nd
Ge1_WD40
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_NOL10_N
RMC1_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_VPS8
BCAS3_WD40
Beta-prop_IP5PC_F
Beta-prop_NUP159_NUP214
WD40_like
THSD1_N
AAIM1_N
Motif
Other DBs
NCBI-GeneID:
118698206
NCBI-ProteinID:
XP_036257215
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All DBs
Position
5:complement(42600213..42647590)
Genome browser
AA seq
500 aa
AA seq
DB search
MGLRALGAAHESGARQAAPGARGSHGPLXPAPPMASPLEDPVLIRPFRGHTAAVTGVAFD
ANAAELVTCSVDRLLILWKLRTQCSAYRFSGHAEAVTSVEFSPDGRVLASASQDHTVRLW
IPCIHGESSILKGHTASVRSVSFSHDGYSVVSASNDKLIKIWSVCYQRLLFTLFQHTGWV
CCAKFSPDGRIIASCGEDKSIKIWDTRNKICINTFSDYEGFPTFVDFNPSGTCIASAGSN
NTVKLWDIRTNKLLQHFKVHRAGVNCISFHPSGNYLITASSDGTLKILDLLGERLIYTLH
GHKGPVLCVAFSKGGENFASGGVDAQVLLWKTNFDTLDYEEVLEHNFRRTHIDDPPHLLD
VYPRSCHFHDEKITSIEVDPAFDVPDIQTPDPVIIDIRTSSYISTPDVGKSEELPSPSAS
PSARSSKRKAERESGSAVLSAEQHRGISSSVDWALDHIVGQLEMLTLTISVLEERLTCTE
DKLKECIKDQQKMLLKGKQN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggggctccgcgctcttggcgcggcgcatgaatccggggctcggcaggccgcgcccgga
gcgcggggctctcacgggccgccccccgctccgcccatggcctccccgctggaggacccc
gtcctgatccggcctttccgcggccacacggcggcggtgacgggcgtcgccttcgacgcg
aacgcggcggagctggttacctgctctgtggacaggctactcatattgtggaagctgagg
acacagtgcagcgcctacagattttcagggcatgcggaagcagtgacaagtgtagagttc
tcaccagatgggcgggtgctggcttcagcttctcaggatcacactgtcaggctatggatt
ccttgcattcatggagaatcatcaatactgaaaggtcatacagcatctgttcggagtgtg
agcttctcccacgatggctactctgtagtttcagcatccaatgataaattaataaaaata
tggagtgtttgctatcagcgccttttgtttaccctattccaacacactggttgggtttgc
tgtgccaaattttcgcctgatggaagaataatagcatcttgtggtgaggacaaatctatt
aaaatctgggacacaagaaataaaatttgcattaataccttctcagattatgaaggattt
ccaacttttgttgatttcaacccaagtggaacatgtatagcttctgcaggttccaataac
acagtgaaactatgggatattcgaacaaacaagctactgcagcatttcaaagttcacaga
gcaggggttaattgtatatcattccatccttctggtaactacctcatcactgcttcttct
gacggtacccttaagattctggacctcttaggagaaagacttatttacactcttcatgga
cacaagggacctgtactttgtgtggctttttcaaaaggtggtgaaaattttgcctcaggt
ggagtggatgctcaggtgttgttatggaaaaccaactttgacactttggattatgaagaa
gttcttgaacacaattttagaagaacacatattgatgatcctcctcatcttcttgatgtt
tacccaaggtcatgtcatttccatgatgaaaaaattacatcaattgaggttgaccctgcc
tttgatgtgcctgatatacaaacacctgacccagttatcatcgatattagaacatcttca
tatatcagtactcctgatgttggcaaaagtgaagaactgccgagtccctctgcttctccc
tcagcaagaagttcaaaaaggaaggcagagcgtgagagtgggtcagctgtgcttagtgcg
gaacagcacagaggcatctcttcctccgtggactgggctttggaccacattgtgggccag
ctagagatgctaactctaaccatttcagtcctggaagaacgtcttacttgtacagaagat
aaattgaaagaatgcataaaagatcagcaaaaaatgttgcttaagggaaaacagaactaa
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