Molothrus ater (brown-headed cowbird): 118698602
Help
Entry
118698602 CDS
T11569
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K28837
protocadherin-19, delta 2
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118698602 (PCDH19)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mate04515
]
118698602 (PCDH19)
Cell adhesion molecules [BR:
mate04515
]
Cadherins
Protocadherins
118698602 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Ig_CLSTN
Ig_Cad99C_N
Cadherin_FAT4_N
PepSY
Ig_BT4661_3rd
Motif
Other DBs
NCBI-GeneID:
118698602
NCBI-ProteinID:
XP_036257923
LinkDB
All DBs
Position
14:complement(18919602..18980922)
Genome browser
AA seq
1095 aa
AA seq
DB search
MGALPALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFR
VVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDL
NDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRG
DGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPA
YTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSG
AIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENA
PPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLT
IQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDL
GLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPS
LQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGR
LSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYL
SPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSY
GHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSE
STFLNVESQNSRNAGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHL
IKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEQ
EPSEGFHCREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCG
AKRTFATFGKEGGEPPAEERLANPKGKRTVDSAACCSPKVSGAVREAGNGCEAVSPVTSP
LHLKSPLAGKPAAPYGAGHCAGGREPFGNSGPSRPSEAEPRGADSESSGQEGNPLLQASR
EKDSPGARRLKDIVL
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgggggctctcccggcgctgctgggggccgccttgctgtgggccggcgccggggccctc
gtcaacctcaagtactcggtggaggaggagcagcgggccggcacggtgatcgccaacgtc
gccaaggacgcccgggacgccggtttcgtgctggacccccggcagcccgcagccttccgg
gtggtctccaactcggccccccacttggtggatatcagccccgggtccgggctgctggtg
accaagcagaagatcgacagggacctgctatgccgacagagccccaagtgtgtcatctca
ctggaggtgatgtccagctccatggagatctgcgtgatcaagctggagatcaaggacctt
aacgacaatgcgcccagcttccccactgaccaaatcgagctggagatctcggagacggcc
agccctggcacccgggtgccactggagagtgcctatgacccggactcgggcagctttggt
gtgcagagctatgagatcacccccaatgacctctttgggctggagaccaagacgcggggt
gatgggtctcgttttgctgagctggtggtggagaagagtctggaccgtgagacccagtcc
cactacagctacgtgatcacggcgctggatggtggtgacccgcccaactttggcacagtg
gagctcagcatccgcgtcatcgactccaacgacaacaacccgctcttcgaggagccagcc
tacaccgtcagcgtgcctgaaaatgccccgccagggacgccagtcatccgcctcaacgcc
tccgacccggacgagggcaccaacggccaggtcctctactctttccacagctacgtctct
gagcgggcccgggagctcttccagatcgacccccagagcggcctcatcacggtgagtggt
gccatcgactacgaggagggtcacgtctatgagctggacgtgcaggccaaggacttgggg
cctaactccatccctgcccattgcaaagtgaccatcagcgtccaggatgccaacgacaac
ccgcccctcatcaacctgctgtctgtcaacagcgagctggtggaggtgagcgagaacgcc
ccgccggggtacgtcatcgccctggtgcgcgtctcggaccgcgactccggggccaacggg
cgcgtgcagtgcaagctcctgggcaacgtgcctttccggctccaggagtacgagagcttc
tccaccatcctggtggacgggcgtctggaccgcgagcagagggaccagtacaacctcacc
atccaggccagggataatggcatcccatccctgcaggccaccaagtcctttaccgtcaag
atcaccgatgagaatgacaaccatccccacttctccaagccctattaccaagtcatcgtg
caggagaacaacactccgggggcctacctgctctcggtgtcggccagagaccctgacctg
ggcctcaatggcagtgtgtcctaccagatcgtgccatcccaagtcagggacatgcctgtt
ttcacctatgtctccatcaaccccaactctggagatatctatgctctgagatccttcaat
catgagcagaccaaggcctttgagttcaaggtcttggcaaaagacgggggtaatccctct
ctgcagagcaatgccaccgtcagggtgattgtcctggacgtcaatgacaacacgcccgtg
atcacggccccgccgctggtcaacgggacggcggaggtgtacatccccaggaacgcgggg
gttggctacttggtcaccgtggtcaaggcagatgactatgatgagggtgaaaatggcaga
ctttcctacgaaatggtggaaggagacagaggattttttgagatcgaccaggtcaatgga
gagataaggaccaccagagcctttggggagaatgccaaaacagcctatgagctcatcgtg
gtggctcatgaccatgggaaaacatctctctcggcttctgccttgattttgatatacctg
tctccagctctggatgcccaggagtccataggatctgttaacctctccttgattttcatt
attgccctggggtctattgcagccattctttttgtcaccatgatctttgtggcagtcaag
tgcaaaagggataacaaggaaatcaggacctacaactgcaggatcgcggagtactcctac
gggcatcagaagaaatccagcaagaagaagaagatcagcaagaacgacatccgcctggtg
ccgcgggacgtggaggagacggacaaaatgaacgtggtcagctgctcctccctcacctcc
tccctcaactacttcgactaccaccagcagaccctgccgctgggctgccgccgctccgag
agcaccttcctcaacgtggagagccagaacagcaggaacgcgggctccaaccacatctac
caccacaccttcacggggcagagcccccagcagcccgacctcatcatcaacggcatgccg
ctgcccgagactgaaaactactcctttgattccaactacgtgaacagcagagctcattta
ataaaaagcagctccacgttcaaggacttggaggggaacagtctgaaggacagcgggcac
gaggagagtgaccagacggacagcgagcacgacgtgcagcgcgggctctactgcgacacg
gccgtcaacgatgtgctgaacaccagcgtgccctccatgggctcccagggccccgagcaa
gagccgagcgagggcttccactgccgggaggagtgccgcatcctgggccactcggacagg
tgctggatgccgcgcggcgccgtgcccagccgcgccaagtcccccgagcacggcaggaac
gtcatcgcgctgtccatcgaggccacggcggtggacgcggagccttacgcggactgcggc
gccaaaaggaccttcgccaccttcggcaaggagggcggcgagcccccggccgaggagcgc
ctcgccaaccccaaaggcaaaagaacggtggactcggccgcctgctgcagccccaaggtg
agcggcgccgtccgcgaggccggcaacggctgcgaggccgtcagccccgtcacctcgccc
ctgcacctgaagagccccttggccggcaagccggcggcgccctacggagccgggcactgc
gccggcggccgggagccctttgggaacagtggcccttcccggcccagcgaggcagagccc
cggggcgcggacagcgagagcagcgggcaggagggcaacccgctcctgcaggcaagccgg
gaaaaggactcgcccggcgcccggagactaaaggacatcgtcctctga
DBGET
integrated database retrieval system
