KEGG   Molothrus ater (brown-headed cowbird): 118698832
Entry
118698832         CDS       T11569                                 
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
mate  Molothrus ater (brown-headed cowbird)
Pathway
mate04382  Cornified envelope formation
mate04510  Focal adhesion
mate04512  ECM-receptor interaction
mate04518  Integrin signaling
mate04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:mate00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118698832 (COL4A5)
   04518 Integrin signaling
    118698832 (COL4A5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118698832 (COL4A5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118698832 (COL4A5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    118698832 (COL4A5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mate04147]
    118698832 (COL4A5)
   00536 Glycosaminoglycan binding proteins [BR:mate00536]
    118698832 (COL4A5)
Exosome [BR:mate04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   118698832 (COL4A5)
Glycosaminoglycan binding proteins [BR:mate00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   118698832 (COL4A5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 118698832
NCBI-ProteinID: XP_054372351
LinkDB
Position
14:complement(8417947..>8491489)
AA seq 1672 aa
LLLGCWGPQEASAAACHGCTSLSKCDCSGVKGEKGERGFPGLEGQPGLPGFPGPEGPPGP
RGSKGDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPGPQGIPGCNGTKGERGF
PGSPGFPGLQGPPGPPGLPGMKGEAGEIITSLLPGQKGDPGFPGLPGIPGPPGSVGIPGP
VGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQIGEQKRPNDI
EFQKGDQGIPGDPGPPGLPGPPGPPGLPGGVKGEKGEQGEPGKRGKPGKDGEPGQPGRDG
LPGGPGINGAPGRDGEKGEKGDMGPPGPPGIVVPRPGIDATVGPKGSKGLPGLPGAKGER
GFSGRPGPPGLPGSPGITTVGPPGPPGLPGERGQKGDPGLPGVSIPGQPGVEGPRGPPGP
PGPPGPPAPSVAPGEGLCEQGPPGPPGIPGQQGFTGERGQKGDRGDTCFNCIGTGVTGPP
GERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGTPGAPGRPGPKGDPGDVLTS
PRLKGDKGDPGFPGPPGLPGIDGTPGRDGLPGLPGPKGEPGSVAFKGEMGIPGDPGIPGL
PGEKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKGDPGQTITEPGVPGPPGPPGR
IGDPGLPGDPGQPGQRGLPGIPGAKGEPGIPGIGLPGPPGPKGFPGTPGPPGAPGTPGRP
GLDGPPGPPGFPGEKGERGFGVPGPPGPPGPPGIKGVQGPKGDPGFPGNPGLPGRAGFDG
TPGPKGDPGPSGPPGLPGPPGIPGIGGQGPPGSPGPPGPVGPPGLQGIPGEKGDPGPPGF
DIPGPPGDQGAPGYPGPPGLPGPQGSPGPPGRDGIPGFPGAKGEMGVMGAPGPPGPPGTP
GRNGLPGLKGNSGLPGPPGPPGPVGQKGIKGEAGLPGPPGTLDPKQLGAKGEKGEPGVPG
IPGLSGQKGYQGLPGDPGPPGLSGPPGVPGLPGIKGDMGLPGQPGPTGPPGLKGAMGEMG
LPGPPGLKGNQGLAGRPGQPGPAGFPGLKGEKGDPGLSGIGIPGPPGPKGDLGLPGYPGS
PGAKGIAGNPGLPGFPGSPGAKGEPGLPGFPGTPGIPGPKGIEGPPGNPGLPGPPGPVGD
IGRPGPPGPSGEKGQPGRDGIPGPAGQKGEPGLPGFGRPGPPGLPGLSGQKGELGLPGPP
GPPGLPGPKGEPGFQGFPGLQGPPGPPGIPGPPLEGPKGSPGPPGVPGRPGPPGPEGPRG
PPGSGGLKGEKGNPGPPGPPGLTGPKGDQGPPGRQGDPGRPGLNGMKGDPGVPGVPGFPG
MKGPTGPAGPAGLTGSQGLPGPPGPPGLPGTIGRSIVVKGDPGSPGPPGQPGSKGPPGLP
GPQGLPGPIGLPGDPGRDGLPGFDGPAGRKGERGLPGQPGSRGVQGPPGPDGLQGPPGPP
GTASVAHGFLITRHSQTRDTPLCPQGTARIYDGFSLLYVQGNERAHGQDLGTAGSCLRRF
STMPFMFCNINNVCNFASRNDYSYWLSTPESMPMSMEPLTGPSIQPFISRCVVCEAPAMV
IAVHSQTIQIPSCPPGWDSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECH
GRGTCNYYANSYSFWLATVEVSEMFSKPQSETLKAGDLRTRISRCQVCMKKT
NT seq 5019 nt   +upstreamnt  +downstreamnt
ctgctgctggggtgctgggggccgcaggaggcttcggcggcggcttgccatggatgtaca
tctttatccaaatgtgattgcagtggagtaaaaggtgaaaagggtgaaagaggattccca
ggcttggaaggacagccaggtttgcctggatttccaggaccagaaggaccacctggtcca
agaggctcaaagggtgacgatggtcttccagggcctattggacccaaaggaatcagagga
ccgccagggcttcccggctttccaggaacaccaggacttcctggattgccaggacaagat
gggccaccaggacctcagggtataccaggatgcaatggaacaaagggagagcgtggattc
ccaggcagtccaggttttcctggtttacaagggcctcctggaccccctgggctgccaggt
atgaagggtgaagcaggtgaaataattacatccttgctgccaggacagaaaggtgaccca
gggtttccaggtcttccagggatacctggtccccctggctccgtgggaataccaggtcca
gttggccctccagggcccccaggtttgacaggacctcctggtccaccagggctgccagga
cccaagggtaatatgggtttgaatttccaaggacccaaaggtgaaaaaggtgaacaaggt
cttcagggacctccagggccaccaggacaaattggagaacagaaaagaccaaatgacatt
gagtttcagaaaggagatcagggtattccaggtgatccaggcccaccaggacttcctggg
cctccaggccctcctggtcttcccggtggtgtgaaaggtgaaaaaggtgagcaaggagaa
ccaggcaaaagaggaaagcctggcaaagatggagaacctggtcagcctggtagggatggt
ttacctggtgggcctggaataaatggtgctccaggaagagatggtgaaaagggtgaaaaa
ggtgacatgggtccccctggtcctcctggaattgtcgttccgaggccaggcattgatgca
acagtgggaccaaaaggtagcaaaggattgccaggacttccaggagccaaaggggagcgt
ggattctctggcaggccaggcccgcctggcttgccaggatctccagggatcactactgtt
ggacctcctggcccacctggcttacctggtgagagaggacagaagggagatccaggcttg
cctggagtttctattcctgggcaaccaggagtagagggaccacgaggaccgccaggacca
ccaggtcccccagggccacctgcaccatctgttgctcctggtgaagggttatgtgagcaa
gggccaccaggtcctccaggaattccgggacaacaaggttttacaggggagcgaggccaa
aaaggtgaccgaggagacacatgcttcaactgcataggaactggagtaactggtcctcct
ggggagaggggaccaccaggacctccgggtagtccaggttctcctggttttcctggacca
aaaggtgaaaaggggcttcctggattaactggccttgtagggccaccaggcttcccaggc
accccaggtgctcctggtagacctggtcctaaaggagacccaggggatgtcctgacttct
ccaagactgaaaggtgacaaaggagaccctggcttcccaggacctccaggtctgcctggc
atagatggcactcctggacgagatggactgccaggtttgcctggccctaagggggaacct
ggcagtgttgcattcaaaggagaaatgggtattccaggtgacccaggaataccaggtctt
cctggagaaaaagggcttcctggacctcctggttttggtccacaaggctcacctggtgaa
aagggcatccaaggtgtatctggccgtccagggcctcctggtgtcccaggtccaaaaggt
gaccctggccagactattacagaaccaggagttcctggtccccctggtcctccaggaaga
attggtgatccaggtcttccaggagatcctggtcagccaggtcagcgtggtttacctggc
atcccaggtgcaaagggagagccaggtattcctggcattggacttccaggtccaccaggc
ccaaagggtttcccagggactccaggcccacccggagctccaggaactccaggtcgccct
gggctggatggacctcctggaccacctggtttcccaggagaaaagggagagcgtggattt
ggagttccaggaccacctgggcccccaggacccccaggcataaaaggagttcaaggacct
aaaggtgatcctggcttcccaggaaaccctggtctgccaggccgggcaggctttgatgga
accccagggcccaaaggtgaccctggaccaagtggaccaccaggacttccaggcccacca
ggcatccctggcattggtggtcaaggtcctcctggatctccaggacctccaggtcctgtg
ggccccccaggactgcaaggcattccaggggagaagggggatccaggtcctccaggcttc
gatattcctggtcctccaggtgaccaaggagctccaggatatccaggaccccctggatta
ccagggcctcagggttcacctgggccccctggcagagatggaatacctggatttccaggt
gccaaaggtgagatgggtgtcatgggagctcctggtcctccagggcctccaggaactcct
ggaagaaatggtctgcctggcttgaaaggtaatagtggattacctggtccaccaggacct
cctggaccagtggggcagaaaggcatcaaaggtgaagcaggtctgccaggtccaccagga
acacttgatcccaaacagctgggagcaaaaggagaaaaaggcgagccgggtgttccaggc
attcctggtttatcaggccagaaaggttatcaaggtctcccaggtgacccaggcccacca
ggacttagtggcccaccaggtgtgccaggattgccaggcatcaagggagacatggggctt
cctgggcagccaggaccaacaggacctccaggattaaaaggagctatgggagagatgggc
cttccaggtccccctgggcttaaaggcaaccaaggactggcaggacgtccaggacagcct
gggcctgcaggatttcccggactgaaaggggagaaaggtgaccctggtctttcaggcatt
ggtattcctggtccccctggaccaaagggagatcttggcttgcctggatacccaggtagt
ccaggtgcaaaaggtatagctggaaatcctggtttgcctggatttccaggcagtccaggt
gcaaaaggagaaccaggccttcctggattcccaggaacaccaggaattccaggaccaaaa
ggtattgagggccctccaggtaatcctggcctgcctggaccacctgggccagtaggtgat
attggtcgtcctggccctcctggtccttcaggggaaaagggacagcctggtcgagatggt
atccctggaccagcgggtcagaagggtgaaccaggtctgccaggttttgggcgtccagga
cccccaggactcccaggattgtcaggacaaaaaggagaactggggttacctggcccaccg
ggaccccctggacttccaggcccgaagggagaaccaggtttccagggattccctggtctg
cagggtccaccaggtccaccaggaataccagggccacctctggaaggtcctaaaggtagc
cctggcccaccaggtgttccaggaaggccaggtccaccaggcccagaaggtccacgaggg
ccaccaggcagtggaggacttaaaggggaaaaagggaacccaggtccacctggtccacct
ggcctgactggtccaaagggagatcaaggaccacctggacgccagggggatcctggtcgt
ccaggtctgaatggaatgaagggtgaccccggggttccaggcgttccaggattcccaggt
atgaagggtcccactggacctgcaggacccgctggcctcacaggcagccagggactgcca
ggcccaccaggtccaccaggtttaccaggtaccattggacgaagcattgttgtcaaaggt
gatcctggttccccaggtcctccaggacagcctggctccaaagggccacctggattgcca
gggccacagggattgccaggtccaattggtcttcctggtgacccagggagagatggactt
cctggttttgatggtccagcaggacgaaaaggagagagaggtcttccaggccaaccaggt
tcacgaggagtacaaggacctcctggtcctgatggtttacaaggcccacctggccctcct
ggaacagcttctgttgctcatggattccttataactcggcacagccagaccagggataca
ccactatgtccacagggaacagcaagaatatatgatggattctctcttctatatgtgcaa
ggaaatgagagagcacatggccaggatttgggtactgctgggagctgtcttagacgtttc
agcaccatgcccttcatgttctgcaacatcaacaatgtttgtaactttgcatcaaggaat
gactattcctactggctgtcaacccccgagtcgatgccgatgagcatggagccactgact
gggccgagcatccagcccttcatcagccggtgtgttgtgtgtgaagctcctgctatggtg
atagctgtccacagccagaccattcagatcccttcatgtcctccaggctgggactccctc
tggatcggttactctttcatgatgcacacgagtgctggagcagagggctctgggcaggcc
ttggcatctcctggctcctgtttggaagagttccgctcagcgccgttcatcgaatgccat
ggccggggcacctgtaattactatgccaattcctacagcttctggctggcaactgtagag
gtgtcagaaatgttcagcaaacctcagtctgagacactgaaagctggagacttgaggacg
cggattagtcgttgtcaagtttgcatgaagaagacgtaa

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