Molothrus ater (brown-headed cowbird): 118699323
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Entry
118699323 CDS
T11569
Symbol
SNCAIP
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
mate Molothrus ater (brown-headed cowbird)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
SNCAIP_SNCA_bd
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
118699323
NCBI-ProteinID:
XP_036259163
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Position
Z:complement(55295052..55383233)
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AA seq
965 aa
AA seq
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MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQNEDRSVSSSSWNCGVSTLLGNA
QKPTGIADVCNKFRPVKRVSPLKHQPESSENNESDDQKNQKGDYQKGSDSQSAPPNDDQS
PGEGESLKSKGTEPAVLLGELEHYDLDMDEILDVPYIKSSQQPVPFTKVAPEKKLLSVCS
TVNGLSVKTCPAGSTESSPAGGTQFCVLSPVKGTQLRKTQPIVLDQHKHSAEELELSQPL
VKCSSAHESEAQGKGFFSRTLADPLGHKAEKTMPNCHRRTFHLQTAVAESKQLEELSMNW
TSAGGPEERSEEVKKIKSILNIVKEGQISLLPHLAADNLDKIHDECDNNLLHVAASKGHA
ECLQHLTSLMGEDCLNERNIEQLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDHPSL
IHYAGCYGQEKILLWLLQFMQEQGISLDEVDQDGNTAVHIAAQHGYLGCIQTLVEYGANV
TMQNHVGEKPSQSAERHGHTMCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQNQL
QQLLEAQRSEGKSLPTSPSLPSSPASGKPQWKPSEADELSPPKSKLNTQDGIQILGSLGT
STSSRARAKIKDEDSDKILRQLLGKEISENVCMQEKLTLEFQDAHASSKNVKKILPEKRE
LKLARLRQLMQRSLSESDTDSANSEDHKNTPVKRTDKPRPQPIVESVESAESLNMMLKKH
TSTAGRRFPFGIRVSKSVDGHSPSPTSESSDADNEAPYQSGTVPQNQFCADSSPSSTDSA
AAQKVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQVELAESELNEEKDKDRSKGVVR
APASSGEHAGEQLKRPFGAFRSIMETLSGNQNNNNNCQTANLIKTSSTLPFTSLGRKTTE
SKGNPAVVSKGRNKPDPYFSYTSLSSSTLNEELGNYAWHDDINWKIQKSDSQKSIEEPEL
QEFFL
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggaagctcctgaataccttgatttggatgaaatagattttagcgatgatatatcgtat
tctgtaacttctctcaagaccatcccagaattatgtagaaggtgtgattcacaaaatgaa
gacagatcagtttccagcagcagctggaactgtggggtctcaactcttcttggaaatgca
cagaaaccaacaggaattgcagatgtgtgcaataaattcagaccagtgaagagggtttct
ccattaaagcaccagccagaaagctctgagaacaatgaaagtgatgaccagaagaaccag
aagggagactaccagaaaggcagtgattctcagtctgcacctccaaatgatgaccagagt
ccaggagaaggagagagccttaaaagcaaaggcactgagcctgctgttctgcttggggag
ctggagcactatgacctggatatggatgaaattttggatgtgccttatattaaatcaagt
cagcaacctgttccttttacaaaggtagctcctgagaaaaaacttttaagtgtgtgttca
actgtgaacggtctaagtgtcaagacctgtcctgcagggagcacagagagctcgcctgct
ggcgggacgcagttctgtgtgctgtctcctgtgaaaggcactcagctgagaaaaacacag
cccattgtccttgatcagcacaagcattcagcagaagaattagagctttctcagccttta
gttaagtgtagctcagcccatgaatctgaagcccaaggcaagggcttcttcagcaggaca
cttgctgatcctcttggtcacaaagctgagaagaccatgccgaactgccaccggaggact
ttccacctgcagacagcagtggcagaaagcaagcagctagaggagctgagtatgaactgg
accagtgcagggggcccagaagagaggagtgaagaggtgaaaaaaattaagagcatttta
aacattgtaaaggaaggccaaatatctttactgccacatttagcagcagataatctggat
aagatccatgatgaatgtgacaacaatctgttgcatgtagcagcatcaaagggacatgca
gaatgcctgcagcatctcacttctttgatgggtgaagactgtttgaacgaacgaaacatt
gagcagctaactccagctgggctagcaataaagaatggtcagctggagtgtgttcggtgg
atggtgagcgaaacagaagctattgcggaactcagttgctcgaaagaccacccaagcctt
attcattatgcaggttgctatggccaggagaaaatccttctgtggcttcttcagtttatg
caagaacaagggatttcgctggatgaagttgaccaggatggaaatactgctgttcacata
gctgctcaacatggctatctgggatgcatacagacattggttgaatatggagcaaatgtc
accatgcaaaaccatgtgggagagaaaccctctcaaagtgctgagcgacatgggcacacc
atgtgttcccgctacttagttgttgtggagacatgtatgtcactggcctctcaggttgtc
aagctgactaagcagctgaaggagcagactgtggaacgtgtgacattacagaaccagctc
cagcagcttttagaagcccaacggtcagagggcaagtcactgcccacatccccaagcttg
ccgtcatctcctgcttctggcaaaccccagtggaaaccatctgaagcagatgaattgtct
cccccaaaaagtaaattgaacacccaagatgggattcagattcttggcagcttgggaacg
agcacatctagtcgtgctcgagctaagataaaagatgaggactctgataaaatcttgcgc
cagttgctggggaaggaaatctctgaaaatgtctgtatgcaggaaaagctgactttagaa
tttcaggatgctcatgcatcctccaagaacgtgaagaagattttgccagagaaaagggag
ttgaagttagcccgactgaggcagctgatgcagcggtctctcagcgagtctgatacagat
tcagctaattctgaggaccacaagaacacccctgtgaaaagaactgacaaaccaaggcct
cagcctatagtggagagtgttgagagtgcagagagtttgaacatgatgcttaagaagcac
acttccacagcaggacggcgttttccttttggcatcagggtctctaagtctgtggacggc
cacagtccttcccctacttcggagagcagcgatgcggataatgaagccccatatcagtct
ggtaccgtccctcagaaccagttctgtgcagacagctctccatctagcaccgacagtgct
gctgcccagaaggttgccaccagcccaaagagtgctctcaagtctccatcctcaaagcgc
agaacctctcaaaatttgaaacttcgagtaactttcgaggagcctgtggtgcaggtggag
ctagcagaatcagaactgaatgaggaaaaggataaagaccggagcaaaggagtcgtgcgg
gctccagccagctctggggagcatgcaggggagcagctgaaaaggccttttggagccttt
cggtccataatggagacactgagtggcaaccaaaataacaacaacaactgtcaaacagct
aacctcatcaaaacctcctcaacgctaccttttacctcactaggaaggaagacaacagaa
agcaagggaaatccagcagttgtctcaaaaggaagaaacaagccagatccttacttcagc
tacaccagtctttcttctagcacgttgaatgaagagctgggtaattatgcttggcatgat
gacatcaactggaaaatccagaaatctgacagtcaaaagagtattgaagagccagagctg
caggaattcttcctctaa
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