Molothrus ater (brown-headed cowbird): 118699555
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Entry
118699555 CDS
T11569
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate03013
Nucleocytoplasmic transport
mate03015
mRNA surveillance pathway
mate03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118699555 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
118699555 (NCBP1)
03015 mRNA surveillance pathway
118699555 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mate03019
]
118699555 (NCBP1)
03041 Spliceosome [BR:
mate03041
]
118699555 (NCBP1)
Messenger RNA biogenesis [BR:
mate03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
118699555 (NCBP1)
Spliceosome [BR:
mate03041
]
Common components
Common spliceosomal components
Cap binding complex
118699555 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
ApoA-II
Motif
Other DBs
NCBI-GeneID:
118699555
NCBI-ProteinID:
XP_036259517
LinkDB
All DBs
Position
Z:47372134..47401095
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AA seq
794 aa
AA seq
DB search
MSRRRHSDDSDGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLEADL
PNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMY
NEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYMFAFLSSLPWVG
KELYEKKDAEMDRLLSQAESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWSQIQKLKK
DRWQERHILRPYLAFDSVLCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGP
VMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAELFQ
LPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHL
SNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSPANP
VCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDGEGFTFNP
LKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQMI
AVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIHKELEE
TKARLARQHKRRDSDDDDDDDDRSTDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQR
FIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDH
HILAVFQQFCALQA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggcggcggcacagcgacgacagcgatgggcagccccacaagaggcggaggacg
tccgagccgtcggagatcgaggagaggctcgagtcgctcatctgcagggtgggagagaag
agtaattcgtctttggagagcaacctggagggcctagctggtgttttggaagctgatctc
ccaaattacaaaagcaagatcctaagaatactatgtactgtcgcacgtctgctaccagag
aagcttactgtttacacgacattggtgggcttgctgaatgccaggaactacaattttggc
ggggaattcgtggaagccatgattcgtcagcttaaagaatgtctgaaagtcaacatgtat
aatgaagctgtgcatttagtacgttttctgtctgatctcgtgaattgccatgtaatagct
gcgccttcaatggtagctatgtttgagaactttgtgagtgtgacccaggaggaggacgta
ccccaagtgcgatgtgactggtatatgtttgcatttctgtcatctttgccttgggttgga
aaggagttatatgagaagaaggatgctgaaatggatcgtctcttgtctcaggcagaaagc
tatctgaaacgccgccagaagattcatgtacccatgctgcaagtgtggactgctgacaaa
ccacatccacaagaagagtatttagactgcctttggtctcagattcagaaattgaaaaaa
gaccgttggcaagagcggcacatcctgaggccctacttggcttttgacagcgtgctctgt
gaggcactgcaacacaatctgcctcccttcacacccccaccccacactgaagattctgta
tatccgatgccaagggttatttttaggatgtttgactacacggatgaccctgagggtcct
gtcatgcctggcagccactccgttgagagatttgtgatagaggagaacctccactgcatc
atcaaatctcactggaaagagagaaagacttgtgctgcacagctgttgagctatccagga
aacaacaagatccctttgaactaccatatagtagaggtaatatttgcagagttgtttcag
ctgccgtctccaccacatattgaagtcatgtacacaacgctgctgattgagctgtgcaaa
cttcagcctggctccttaccacaagttcttgcacaagccacagaaatgctctacatgcgt
ttggatacaatgaataccacatgtgtggacagatttattaactggttttcgcaccacttg
agcaactttcagttccgttggagctgggaagactggtcagattgtcttactcaggacctt
gaaaaacccaaacccaaatttgtgagagaggttttggaaaagtgcatgcgactctcctac
catcagcgaataatagacattgttcctgcaagtttttctgtcctcagtcctgctaatcca
gtgtgcatttacaaatacggagatgagagcaataggtctcttcctggatatactgtggca
ctctgtttaacaatcgcaattaaaaataaggccagcaatgatgaaatcttcagcatttta
aaagatgtacctaatccaaaccaggatgatgatgatggtgaaggatttactttcaaccct
ctgaaaatagaagtctttgttcagactctgctccatctagctgcaaagtctttcagccac
tccttcagcgccctggcaaagtttcatgaagtcttcaaaacgcttgctgaaagtgatgaa
gggaagcttcatgttctgagagttgtgtatgaggtttggaagaatcatccacagatgatt
gctgtgcttgtggacaagatgattcggacgcaaattgttgactgtgctgcagtagcaaac
tggatcttttcttcagagctggcacatgattttaccaggttttatatctgggagatctta
cattccacaattcgtaagatgaataagcatgtcctgaagattcacaaagaactggaggag
accaaagcaagattggccaggcagcacaaaagacgagacagtgatgatgatgatgacgat
gatgaccgaagcactgatcgggaagatggaccactggaagagcagatagagcgcttgcag
gaaaaagtagagtcagcccagagtgagcagaagaatctctttcttgttatattccagcgt
ttcattatgttgttaacggagcacttagtgcgctgcgagactggtggaattgatgtattt
acaccttggtacaagagctgtatagagaggttgcagcagatcttcctgcagcaccaccag
ataatccagcagtacatggtgacactagagaacctcctgtttacagctgaactggaccac
cacattctggctgtgtttcagcagttctgtgctctgcaggcctga
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