Molothrus ater (brown-headed cowbird): 118699574
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Entry
118699574 CDS
T11569
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
mate Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mate03400
]
118699574 (SMC5)
DNA repair and recombination proteins [BR:
mate03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
118699574 (SMC5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
ATG16
AAA_29
AAA_25
Motif
Other DBs
NCBI-GeneID:
118699574
NCBI-ProteinID:
XP_036259547
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Position
Z:complement(63663075..63712958)
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AA seq
1058 aa
AA seq
DB search
MAAAREEGKVVKRGESKSPFVPGSIVRIFMKNFLTYTVCEVHPGPNLNVVVGANGTGKSS
IVCAICLGLAGKPSFLGRADKVGLFVKQGCMKGIVEIELFKSPENILITREIYVVNNASV
WFINRKPATLKTVEEKIAELNIQVDNLCQFLPQDKVGEFTKLSKTELLEATEKSIGSPEM
YQLHCELKNFREKERELENLCREKSTSLEKMKQRVERYKQDVERYHEYKRHLDLIEMLER
KRPWVEYENVREQHEEVKQCRNQVKKELKCLREMQAPWTRRIQEAEENLNNLDMKTRDNT
AEIRYISQKCKEKQDALEMKDKQIEEINQAFRMKKDEETNRQKKIQQTQQIIEEWQNDLD
TMAICENLQPQIDAVNTELKKLQEEKANIDNDVSDLRAEKNNQEREEKRIIDRLGQLNNI
MHMKEENLKMRFRDTHSALMWLRNNKDKFKKKACEPMMLEINMKDSRHAKYVENHISSQD
LRAFVFECQEDMETFLVEVRDRQKLRVDAVCAPDESCAEILPSRPIEELHRYGFYSYLRE
LFDAPSPVMSYLCSQYRVHDVPVGTQKTRDMIERIKRETNLKQIYTAEERYVIKISSYTK
QTISSNICLKEAQYLTSSVDTEERGQLEKQRQDISNTLKSLDARLTALFERQKLLDLRDN
KLRQEKKVLLERGNRRRQLESKIGVKYDSLRQLEQDAIDLEKEFQLANVKIKEINKQKAE
LVTELMHLMKRIIPLNVNKVDLAFQMTKVTAKKNRLQSEYKAGTVQLRAAQQRFHELDNR
KQLLYEKCKELMKQAQHICRLGPDQDFPEEFKVAFQTLPNTLEEIDAFLNEEKTRASCFT
GLSPSVVEEYNKQTQEIQQLTEYLEEKRNELNNYKQNISQVKEKWLNLLKVMIEQINGKF
SKFFSSMQCVGEVDLHVENEEEYEKYGIRIRVKFHSSTELHELTPYYHSGGEKTVSTVLY
LMALQELNRCPFRVVDEINQGMDPMNERRVFEMVVETACKERTSQYFFITPKLLQNLTYN
DKMTVLFVYNGPFMLETYKWNIKRFKRRQRHLSSMTES
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgcgggaagaggggaaagttgtgaagcgtggtgagtctaagtcccccttt
gtaccgggctccatcgtcaggatcttcatgaagaacttcctgacatacactgtctgtgaa
gtacatccagggcccaacctgaacgtggtcgtaggtgctaatggcacaggcaagtcaagt
atagtttgtgccatctgcctgggactggctggaaaaccttctttcttagggcgagctgat
aaggttggtctgtttgtgaagcaggggtgcatgaaaggcatagtggaaattgaactgttt
aagtcaccagaaaatattcttatcacacgtgagatttatgtggtgaacaacgcatcagtg
tggtttatcaacagaaaaccagcaaccctgaaaacagtagaagaaaaaattgcagagtta
aacatccaggtggacaatttgtgccagtttcttcctcaggacaaagttggagaatttaca
aaattgagtaagactgagttgcttgaagccactgaaaagtccattggttctccagaaatg
taccagcttcattgcgaactgaaaaatttcagagaaaaggaaagagaactagagaacttg
tgcagagaaaaatccacctcattggagaaaatgaagcagagggttgaacggtacaagcaa
gatgttgaaagataccatgaatacaagcgccatttagacttaatagagatgcttgagagg
aaaaggccgtgggtggaatatgaaaatgttcgtgaacagcatgaagaagtgaaacagtgc
cgaaaccaagttaagaaagaactgaagtgtctgagagaaatgcaggccccatggacaaga
agaatccaagaagctgaagaaaatttaaacaatctggatatgaaaaccagagataatact
gctgaaatcagatatatttcccagaaatgtaaagagaaacaagatgctttggagatgaaa
gataaacagattgaagaaattaatcaagcattcagaatgaaaaaagatgaagaaacaaac
aggcagaagaaaatacaacaaactcaacaaataatagaggagtggcagaatgacctggat
acaatggcaatctgtgagaatcttcagccacaaatcgatgctgttaatactgagctgaaa
aaattacaagaagagaaggcaaatattgataatgatgttagtgatctaagagcagaaaaa
aacaaccaagagcgggaagagaaaagaataattgatcgccttggacaacttaataatata
atgcatatgaaggaagagaaccttaaaatgagattccgagacacgcactctgctcttatg
tggctaagaaacaacaaagacaagtttaaaaaaaaagcttgtgaacccatgatgcttgaa
atcaatatgaaagacagtagacatgcaaaatacgttgaaaatcacatttcgtcccaggac
ttgagggctttcgtttttgagtgtcaagaagatatggagacatttctggtggaggtgcgt
gatcgtcagaaactaagagtggatgctgtatgtgcacctgatgaatcatgtgctgaaatt
ttaccatcaagacctattgaagaattacaccgatacggattttattcatatttacgagag
ttatttgatgcgccttctccagtgatgagttacctttgtagccagtaccgtgttcatgat
gttcctgtgggaacacagaagaccagagacatgattgaaaggatcaaacgggaaaccaat
ctgaagcaaatttatacagcagaagaaagatatgttattaaaatatcttcttacacaaaa
caaaccatctctagtaacatatgcttgaaggaggcacagtatctcactagttcagtggat
acagaggaaagaggacagttggaaaagcagcgacaggacatcagtaatacgttaaagtca
ttggatgcacgtttgactgcactgttcgagagacagaaacttctggatctcagggacaat
aaactcaggcaggagaagaaggtgcttttagagagaggaaaccggaggaggcagttggaa
tcaaaaatcggtgtgaagtatgatagtttaagacagctggaacaagatgctattgaccta
gagaaggaatttcagctggcaaatgtaaaaatcaaagaaataaataaacagaaagcagaa
cttgttactgaactgatgcatctcatgaagaggatcataccattgaacgtcaacaaagta
gatctggcttttcagatgaccaaggtgactgctaagaagaacagactacaatcagagtac
aaagcaggaactgtacagctaagagctgcacagcaacgttttcatgaactggataatagg
aagcaacttctttatgagaagtgcaaggaactgatgaaacaggctcaacacatctgcaga
ttgggtccagatcaagattttccagaagaatttaaagttgcttttcagactcttccaaac
acattggaggaaattgatgcttttctgaatgaagagaaaactagggcttcctgtttcaca
ggcctcagtccttcggttgttgaagaatacaataagcaaacacaagaaatacagcagtta
acagaatatctagaggaaaagagaaatgagttgaataactataagcaaaacatttcacag
gtcaaagaaaaatggttaaacctcttgaaagtgatgattgaacaaattaatggaaagttc
agtaagttctttagttctatgcagtgtgttggtgaagttgatcttcatgtggaaaatgag
gaggagtatgagaagtatggaattcgcattagagtcaaattccacagtagcactgaactt
catgaattgactccgtattatcatagtggaggtgagaaaactgtttctactgtgttatac
ctgatggctctgcaagaactcaacagatgtcccttcagggttgttgatgagataaatcag
ggaatggatccaatgaatgagagaagagtttttgaaatggttgtggaaactgcttgtaaa
gaaaggacatctcagtacttcttcattacaccaaagctcctgcagaatctcacttacaat
gacaagatgactgtgctgtttgtctacaatgggccttttatgctggagacatacaaatgg
aacataaagcgcttcaagagacggcaacgtcacctttcaagcatgactgaatcttaa
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