KEGG   Molothrus ater (brown-headed cowbird): 118699583
Entry
118699583         CDS       T11569                                 
Symbol
KDM4C
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
mate  Molothrus ater (brown-headed cowbird)
Brite
KEGG Orthology (KO) [BR:mate00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mate03036]
    118699583 (KDM4C)
Enzymes [BR:mate01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     118699583 (KDM4C)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     118699583 (KDM4C)
Chromosome and associated proteins [BR:mate03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118699583 (KDM4C)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF7141 SLX1_C LBR_tudor Tudor_5 DUF61
Other DBs
NCBI-GeneID: 118699583
NCBI-ProteinID: XP_036259557
LinkDB
Position
Z:28174158..28424205
AA seq 1071 aa
MATVTSDSPPNPSCKIMTFRPSMDEFREFNKYLAHMESQGAHRAGVAKVIPPKEWKPRKH
YDDIEDLVIPAPIQQMVTGQSGLFTQYNIQKKPMTVKEFRDLANSDKYRTPRYVDYEDLE
RKYWKNLTFVAPIYGADINGSIYDEGIEEWNIAHLNTILDVVGEECGISIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFL
RHKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWID
YGKAAKLCTCRRDMVSISMDVFVRKFQPERYQLWKQGKDLYTIDHTKPTPESTPEVKIWL
QRRRKIQHFPKSFQHTRSRSKKLKTPEDKRVSAKVADEKIIVTEAATDGFKVSEEPEKKV
RVVNTGLPSGEEENSSRMHLDQHLLDHVKVSGRIPSDSVLTPVPGLERTKMEDEDRIDSS
CSSFTLEDSVASKIASDRCRKEDSLKSQNQYASSIPYHKAEGQTSEAENPDREESVSTED
GISNLESSGSSLECGEVPIVKKGEEDKMEISCSEEVETKKISKSWRHPLHKPPARSPMTL
VKQQATSDEELPETTLIEEQVQESEAWAKPLVYLWQTRPPNFYAEKEYNAACAKKEPYCA
VCTLLVPYYRTDNQDEESTTFSEANSAETLMAENVKTKPLIPEICFIYSEENTENYPSNA
FVEEDGTSLLISCAKCCVRVHASCYGVPSHEIHNEWLCSRCRKEAWTAECCLCNLRGGAL
KQTTDKKWAHVICAIAIPEVRFGNVTERAPIDTSRIPLQRLKLKCIFCRHRVKKISGACI
QCSYGRCPASFHVTCAHAAGVLMEPDDWPYVVYITCFRHKINQNVRAKVCGKAITVGQTV
ITKHRNTRYYSCRVIGVTSQIFYEVMFDDGSFSLDTFPEDIVSRDCLRLGPPAEGEVVQV
KWPDGKLYGAKYLGTNTAHMYQVEFEDGSQIVMKREEIYTLDEELPKRVKARLSTASDMR
FEDTFYGADIILGEKKRQRVLSSRFKNEYVDDPGYRTFLKSSFQKKCQKGL
NT seq 3216 nt   +upstreamnt  +downstreamnt
atggctactgttacctcagatagtcctcccaacccaagctgcaaaatcatgacttttagg
ccttcgatggatgaattccgggaattcaacaaatacttggcacacatggaatcacaaggt
gctcatagggctggagttgcaaaggttattccaccaaaagaatggaagccgagaaagcat
tatgatgatattgaagatttggtgattcctgctccaattcaacagatggtcactggccag
tctggacttttcacacaatacaatattcagaaaaagcccatgacagtgaaggagttcagg
gatctagccaacagtgacaaataccgcactccaagatatgtagactatgaagatctggag
cgtaaatactggaagaacttgacttttgtggcaccaatttatggagcagatatcaatggg
agcatttatgatgaaggtattgaggaatggaatattgcccatcttaatacaatattggat
gttgtaggagaagagtgtggaatttctattgagggtgtaaatacaccatatctttatttt
ggcatgtggaaaacaacatttgcatggcacactgaagacatggatctctacagtattaat
tatctccatttcggggagccaaagtcatggtatgctattcctccagagcatgggaaacgg
cttgaaagactagctcaagggttctttccgagcagctctcaaggatgtgatgcttttctg
cgccacaagatgactctgatttctccctcaatattgaaaaagtatggaattccttttgac
aaggttacccaagaggcaggagaatttatgatcactttcccatatggataccatgcaggg
tttaaccatggatttaattgtgcagagtcaacaaactttgccactgttcgatggattgat
tatggaaaagcagcaaaactgtgcacttgtaggagagacatggtgtcaatatccatggat
gtctttgtgaggaagttccaaccagagagataccagctgtggaaacaaggcaaagattta
tataccattgatcatacaaaaccaactccagaatcaacacctgaagtgaagatctggcta
cagagaagaaggaaaatacagcactttcccaagagcttccagcacaccagatctcgatct
aaaaagcttaaaactccagaggacaagagagtatctgctaaggtagctgatgaaaaaatc
atagtgactgaagcagctactgatggcttcaaggtcagtgaagaaccagaaaaaaaagtg
agagtggtaaacacaggattgccttctggggaagaagaaaacagtagtagaatgcatctg
gatcagcatctattggatcatgtcaaggtttcaggaagaatcccttctgactcagttttg
acccctgttcctggactagagagaacaaaaatggaagatgaggacagaatagattccagt
tgttcttcctttacgcttgaagattctgtggctagcaagattgcttctgatagatgtaga
aaagaagacagtttgaaatctcagaatcaatatgcttcatccataccataccataaagca
gagggacaaacttctgaagcagaaaatccagatagagaggaaagtgtctcgactgaggat
ggtatcagcaacctagaaagttctggaagtagtttggaatgtggagaagtgcccattgta
aaaaagggtgaagaagacaaaatggaaatatcttgttcagaggaagttgaaacaaagaaa
atatctaagagttggcgtcacccactacataaacccccagctagatctccaatgactttg
gttaaacagcaggcaactagtgatgaagaactgcctgaaacgaccttaattgaagagcaa
gttcaagagtcagaggcatgggccaagcctctggtctacctgtggcagacaagaccaccc
aatttctatgctgaaaaagaatataatgcagcttgtgcaaaaaaggaaccttactgtgct
gtttgcactcttcttgtgccatactataggacagacaatcaggatgaagaaagtactact
ttcagtgaagcaaactcagcagaaacattgatggcagaaaatgtgaagactaaacctctt
attccagagatttgttttatttatagtgaagaaaacaccgaaaactatccatcaaatgcc
tttgttgaagaagatgggacaagtcttctgatttcatgtgcaaagtgttgcgtacgggtt
catgcaagttgctatggtgttccttctcatgaaatccataacgagtggttgtgttctcga
tgcagaaaagaagcctggacagctgaatgttgtctctgcaatttgagaggtggtgcatta
aagcagactactgacaaaaagtgggcacatgtaatatgtgcaattgccatcccagaagtc
agatttggtaatgtcacagagcgtgctccgatagacactagtagaatacccttgcaacga
ttaaaattgaaatgtatcttctgcaggcacagagttaagaaaatctctggtgcctgcatt
cagtgttcatatggacgctgcccagcatccttccatgttacctgtgcccatgctgcagga
gtgctgatggaacctgatgactggccatatgttgtctacatcacatgtttcaggcacaag
atcaaccaaaatgtgagagctaaagtatgtgggaaggccattacagttgggcagacagtc
atcacgaaacatagaaatacacgatactatagttgcagagtcataggagtgacgtctcag
attttctatgaagtcatgtttgatgatggctccttcagtctggatacttttcctgaagac
attgtaagcagagattgcctaaggctgggtccacctgcagagggagaggttgtccaagtg
aaatggcctgatggaaaactgtatggtgcaaagtatctgggaacaaatacagcccacatg
tatcaggtggagtttgaagatggttctcaaatagtaatgaagagagaagaaatatataca
ctggatgaagagcttcctaagagagtaaaagcacgtttatctacagcttctgacatgaga
tttgaagacacattttatggagcagatattatcttgggagagaagaaaaggcagagagta
ttgagttctcgctttaagaatgaatatgtggatgatccaggataccgcaccttcttaaaa
agctcattccagaaaaaatgccagaaaggactttaa

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