KEGG   Molothrus ater (brown-headed cowbird): 118699781
Entry
118699781         CDS       T11569                                 
Symbol
POLR1E
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
mate  Molothrus ater (brown-headed cowbird)
Pathway
mate03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mate00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    118699781 (POLR1E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mate03021]
    118699781 (POLR1E)
Transcription machinery [BR:mate03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     118699781 (POLR1E)
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 118699781
NCBI-ProteinID: XP_036259845
LinkDB
Position
Z:complement(69638710..69647687)
AA seq 413 aa
MAAATWRYRGDPEGERPAALVRFANGRLERPESLRFTVYRNRDSAHPRKRHRRILVSETE
RLCYVGHNFGSQVMKCNSLCRYFVGVLDKSSGQMDVYNAEIFNMQPLLSDNVMPDDTKDY
QTKSYREKMDLCIEAFGTSKQKRALSSRRMNAVGSDIVSTAVTKAAANVIDAKGVTGLMQ
DVAQDDVQNISAFLPPCHEDAERPEHVYRFEDILSAAEYEALRVPAAALASITAEEMAKR
AEERSLCSFVLEELKFLPTDEKSRDHKARCLWFLDTLIKFSQQKVIKKKHPMGPECPHII
SKKLMKNFTSLTYNNGSIQNLISASMKAKITAYVIALALHINNFQTDLTVLQNDLKLSES
RILDIAKALRLRVSKAKGVPGLENEQNHKLGTLSLPLPTQKAPEGQRKRKKMS
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggccgccgccacctggcgctaccgcggggaccccgagggcgagcggccggcggcgctc
gtgcggttcgccaacggcaggctggagcggcctgagtcgctgcgcttcaccgtgtaccgg
aaccgggactcggcgcacccgcggaagaggcaccgccggatcctggtctcggagacggag
cggctctgctacgtggggcacaactttggcagccaggtcatgaagtgcaactccctgtgc
aggtactttgttggagtgctggacaagagctctgggcagatggacgtctacaatgctgaa
atattcaacatgcagcccctgctctcagataacgtgatgcctgacgacaccaaggactac
cagaccaaatcctacagggagaagatggatctgtgcatcgaggccttcgggaccagcaag
cagaagcgcgccctgagctcccgccgcatgaacgccgtgggcagcgacatcgtgagcacg
gctgtgaccaaggcagctgccaacgtcatcgatgccaagggagtgacagggctgatgcag
gatgtggcccaggatgatgtgcagaacatctctgccttcctcccaccgtgccacgaggat
gctgagcggccagagcacgtctacaggtttgaggacatcctgtctgctgccgagtacgag
gcgctgcgggtgccagcagccgccctggccagcatcactgcagaggagatggccaagagg
gcagaggagaggagcctctgctcctttgttttggaggagctgaagttcctgcccactgat
gagaagagcagggaccacaaagccagatgcctctggttcctggacaccctcatcaagttc
agccagcagaaagtgatcaagaagaagcatccaatgggtcctgaatgccctcacatcatc
agcaagaagctcatgaagaatttcacctcgctgacctacaacaatggcagcatccagaat
ttaatctctgcatccatgaaggccaaaatcaccgcctatgtcattgccctggctctgcac
atcaacaacttccagacggatctcaccgtgctgcagaacgacctgaagctctcagagagc
aggatcctggacatcgccaaggccctgcggctcagggtgtccaaggccaagggggtgcca
gggctggagaatgagcagaaccacaagctgggcaccctgtccctgcccctgcccacgcag
aaggcaccagagggacagcgcaagcgcaagaaaatgagctga

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