Molothrus ater (brown-headed cowbird): 118699914
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Entry
118699914 CDS
T11569
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118699914 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mate04131
]
118699914 (SPATA13)
Membrane trafficking [BR:
mate04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118699914 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
118699914
NCBI-ProteinID:
XP_036260041
LinkDB
All DBs
Position
2:70979694..71138427
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AA seq
1335 aa
AA seq
DB search
MKAFSTPSLAAPPEELSSPSRCEGKANQDAADDGEAARSAGGDCSVALSYPSLHLHAYSI
ESMTTFPNVCGNGTTVTCIVMDNKEPQNQTTCASDNGRHSTDNNVEEEFQEDKLSPSKIM
RFFTTPRKRANSSSDRPRSLVLMGNSSTWNAFSSIRKMGSFKKLKSSVQQGTQTRECSDV
VNDNSIGKHGSNGAVVQVQTNRYSYSGPLHDFQNAVDGLASDCSDVEESDESFLRNTHRS
RSIRRAYGAGRINLLDTDKIQSRHNCVRPTSPVIAEPKICEILVKDSENNRIIYWRSKSS
DNLNFLKKSSFKRKSTSNLADLKVANEKQIPARTASVPSADSDKSDGNPERRSKRWKSPI
RAKDFDRVLKLVSNVTDVARKKDGPKNVAPSPSELSQRTRSNSRLHDDYSRRVSSSTDHD
RKRCTSSVSSPDSSLPGTPCLQSPVIAQDKKAEMNVAVMEDKSPRTSSGIPDSDSFSPTL
DDISPFPNEVFYSDSDEPKATQQCTDEAENLHVPVRPTTPKPQSPTAGKVKCSMNFQCPN
HHSTLSLSSSESEERVEVPGLKLGRNPVCFQDSVKTVYYDDGNEDSGISSHSQLSLNLAS
GTEEKKEEVVSDDHWKRSTSQEEEKADSQKVTPRKWGSGKRSRPRPLSDYGQMSIRSFSI
PEDAVAVESQNTDCTDGENQLGLASLGSGIQSNTVGYHRGRKRRPISVIGGVNFYGDDQV
EERENLLTQPVARPPVPAHKVPPYKAVSARFRPLTFSQSTPIGLDRVGRRRQMRTSNVAA
DVGTESSALVDDNGSEEDYSYEELCQAAPRYLQPGGEQLAINELISDGTVVYAEALWDHV
TMDDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEEVPENCSNIQD
EEQDSDISKHRQKIAENRDQMRTNVIQEIMKTERVYIKHLKDICEGYIRQCRKHTGMFTA
AQLSTIFGNIEDIYKFQRKFLKDLEKQHNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHP
SACIELSRLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQ
EHSDYSNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGPDVLARSSELIHS
GELTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRIDMDETEIVDTEDGRDKD
FNINVKNAFKIINRTTEEVHLFCAKKQEDKKRWMEACENERRRVREDKEMGMEISENQKK
QAMQNARKSRQGKIKGVSYNGCPLPPLHQTLHPLHQRHITVPTSVPQQQVFALAEPKRKP
SLFWHTFNKLTPFKK
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccttcagtactcccagcttggcagcaccacctgaggagctcagctcacccagt
cgatgtgaaggcaaggcaaaccaagatgcagcagatgatggggaggcagcaaggtcagct
ggtggggactgcagtgttgctttgagctaccccagcctccacctccatgcctacagcatc
gagagcatgacaacatttccgaatgtctgtggaaatggcaccaccgttacttgtatagtt
atggataataaagaaccccaaaaccagactacctgtgccagtgataatgggagacacagc
accgacaacaatgttgaggaggaatttcaagaggacaagctcagcccttccaaaatcatg
cgctttttcaccacccctcggaaacgggctaattccagctctgacaggcctcgttctctg
gttttgatgggcaactcatccacgtggaatgccttttcttctatcagaaagatgggatct
ttcaagaagctgaaatcttcagttcagcaaggaactcaaacaagggaatgctcagacgtt
gtaaatgacaacagcataggcaaacatggttcaaatggagcagtggttcaagttcagact
aacaggtattcctattcggggcctctacatgatttccagaatgcagtggatggtttggct
tctgactgctctgatgtggaggagagtgatgagtccttcctgaggaacactcatcgctca
cgtagcatcaggcgggcttacggagctggccgcatcaacttgttagacacagataaaatt
cagagtcgccacaactgtgttaggccaacgtcacctgtcattgcagagccaaagatctgt
gaaattctggtgaaagactccgaaaacaacaggatcatttattggagaagcaaaagttct
gataatttgaactttctgaagaaaagctcattcaaacggaagtccacctcaaaccttgct
gatctgaaggttgcaaatgaaaaacagataccagcaaggactgcgagtgttccttctgct
gactccgacaaaagtgatggaaaccctgagaggcgatccaagcgatggaagagccctatc
agagcaaaggattttgatcgagttttgaaactcgtcagtaacgttacagatgttgcaagg
aagaaggatggccccaagaacgtggctccttctcccagtgagctgtcccagagaacaagg
tcaaacagcaggctgcacgatgactactcccgcagggtttccagcagcacggaccatgac
aggaagagatgcacctcctcagtatccagtccagactcttccttgccaggaacaccttgc
ctgcaaagccctgtgattgctcaggataaaaaggctgaaatgaatgtagctgtcatggag
gataaaagccccaggacgtcatcaggtatcccagactctgatagcttttcacctactctg
gatgacattagtccatttcccaatgaagtcttttattcggactcagatgaaccaaaagct
actcagcagtgtacagatgaagctgaaaaccttcatgttccagtcaggccaactactcca
aagcctcaaagtccaactgcagggaaggtcaaatgcagtatgaatttccagtgtccaaac
catcacagcacgttgtcactgagctcatcggagagcgaggaaagagttgaggtaccgggg
ctgaagctgggcaggaatcctgtttgcttccaggattcagtgaaaactgtgtattatgat
gatggaaatgaagacagtggcataagcagccactctcagctgagcctcaatttagcctct
ggtactgaagaaaaaaaggaagaggttgtttctgatgaccactggaagaggtccacatcc
caggaggaagaaaaggcagactcacaaaaggtcacaccgaggaaatggggctctggaaaa
agatcccggcccagacctctctcagactatggccaaatgtcgatccgaagtttctctata
ccagaagatgcagttgcagtggagtctcagaacacagactgcacagatggagagaatcag
ctgggactggcatcccttgggtctgggatccaaagcaatactgtaggctaccacagaggg
aggaaaagaagacccatctccgtaataggtggggtcaatttctatggagacgatcaagta
gaagagagagaaaatctgctgacacaacctgtggcacggccacccgttccagcacacaag
gtgcccccgtacaaggctgtttcagccaggttccggccactcaccttctcacaaagtacc
cccatcggtctggaccgcgtgggacggaggcggcagatgagaacatctaatgttgctgca
gatgttggaactgaatcttcagccttagtggatgacaatggcagtgaggaagattacagc
tatgaggagctctgccaagctgctcccaggtacctgcagcccggaggggaacagctagca
attaatgagctgataagcgatggcaccgtcgtctatgcagaggctctctgggaccatgtc
actatggatgatcaagagctgggcttcaaagctggagatgtcattagagttctagaagct
tccaacaaagactggtggtggggaagaaatgaggacaaggaggcctggtttccagctagt
tttgtcaggctgcgagttaatcaggaagaagtgccagaaaactgtagtaatatccaggat
gaagaacaagattcagatattagcaagcatcgccagaaaatagctgaaaacagggatcag
atgagaaccaacgttatacaggaaattatgaaaacagaacgagtctatatcaagcatctc
aaggacatctgtgagggttacattcggcagtgtcgcaaacatacaggaatgttcaccgca
gctcagctaagcaccatttttggaaatattgaagatatttacaagttccaaaggaagttt
ctaaaggatcttgagaaacagcacaacaaagaagaacctcatctaagtgaaatagggtca
tgttttcttcaacatcaagaaggctttgctatttattcagagtattgtaacaaccatccc
agtgcctgcattgaactctccagactgatgaagcagggcaaataccgccacttcttcgag
gcctgtcgcttgcttcagcagatgattgacattgccattgatggttttcttctcacacct
gttcagaaaatctgcaaataccctctgcagcttgcagaattgctcaaatacaccactcag
gagcacagtgattacagcaacataaaagctgcatatgaggccatgaagaacgtggcatgc
ctgatcaacgagcgaaaacggagactagaaagcatagacaagattgcccgttggcaagtc
tctattgtagactgggagggaccagatgtgttagccagaagctcagaactgatccactca
ggagaactgaccaaaatatcaaaacaaggcaaaagccagcagaggactttcttccttttt
gaccatcagcttgtgttctgtaagaaggacttgctgagaagggacattttgtattacaag
gatcgtattgacatggatgagacagaaattgtggacaccgaagatggcagagacaaagat
tttaacatcaatgtcaagaatgcttttaagataataaacagaacaacagaggaggttcat
ttgttctgtgcaaaaaaacaggaggataaaaagagatggatggaggcgtgtgaaaatgaa
aggagaagagttcgagaagacaaggaaatgggtatggaaatctcagaaaaccagaagaaa
caagccatgcagaatgcccgtaagtcaaggcaaggaaaaattaaaggtgtgagctataat
gggtgtcctctgcctcctctacaccaaacccttcatccccttcaccagcgacacatcacc
gtgcctaccagcgtcccgcagcagcaggtctttgccctggcagaacccaagcggaagcca
tccctcttctggcataccttcaacaaactcactccctttaaaaagtga
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