Molothrus ater (brown-headed cowbird): 118701778
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Entry
118701778 CDS
T11569
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118701778 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mate04515
]
118701778 (ROBO1)
Cell adhesion molecules [BR:
mate04515
]
Immunoglobulin superfamily
ROBO family
118701778 (ROBO1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_VEGFR-1-like_5th
C2-set_2
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
DUF7908
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
118701778
NCBI-ProteinID:
XP_036262550
LinkDB
All DBs
Position
2:complement(107397349..108085207)
Genome browser
AA seq
1662 aa
AA seq
DB search
MAVLSLLLLLGLIDITAAVDVAPRIKAGSRWRGEKNHSEDAERGNDSGTPLPTSDHGDNS
LGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKD
DPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFR
QNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGTPLDDKDERITIRGGKLMITYTRKN
DAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTV
RWRKDDGELPKARYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQEPPQF
VVKPRDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDL
TITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLV
LNCVATGTLMPTILWKKDGILISTQDSRIKQLETGALQIRYAKLGDTGRYTCIASTPSGE
ATWSAFIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTS
YIIEAFSHASGSSWQTVAENVKTESFAVKGLKPNAIYLFLVRAANAYGLSDPSQISDPVK
TQDVPPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRP
TPASYGESEWLIFEVRTPTKNSVIIPELKKGVNYEIKARPFFNEFQGADSEVKFAKTLEE
APSAPPQSVSVTKNDGNGTAIVVTWQPPPEDNQNGMVQEYKVWCLGNESRYHINKTVDGT
TFSVVIPSLVPGIRYSVEVAASTGAGPGVKSDPQFIQLDSHGNPVSSEDQVSLAQQISDV
VKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGG
EAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTSGNGNSDSNLTTYSRPA
DCIANYNNQLDNKQTNLMLPEPTVYGDVDLSNKINEMKTFNSPNLKDGRFVSQPGQPTPY
ATTQLIQSSISNNVNSGSGDTNEKHWKPSVQQKQEAPPIQYNIMEQNKLNKDYRVNDNIA
PTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKAPKQAGMNWADLLPPPPAHP
PPHSNSEDYSLSVDEGYDQEIPCPVPPARMYLQQDELEEEEEDERGPTPPVRGAASSPAA
VSYSHQSTATLTPSPQEELQPMLQDCQEDLGHTQHQPDRRRQPVSPPPPPRPISPPHTYG
YISGPLVSDMDTDAPEEEEDEADIEVAKMQNRRLLLRGLEQTPASSVGDLESSVTGSMIN
GWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMHEAAGGRRH
FHASHCPRPTSPVSTDSNMSAVVIQKVRPAKKQKHQPGHLRREVYTDDLPPPPVPPPAIK
SPTAQSKAQLEVRPVLLPKLASADGRTDRSADRKGASYKGRDGAEGRQHPDLRTGSAERR
EPLEPPGDGKPRASKAPKRDGAPAKSHLLQEDILPYSRPTFPTSNNPRDPSSSSSMSSRG
SGGRQRADQANLARRNVAEMQVLGAYEQGEEEEEEEMEETES
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctgtcactgctgctgctgcttgggctaatagacataactgctgctgtggac
gtcgcgcctagaataaaagcggggtcaaggtggagaggtgaaaagaatcactccgaggac
gcagagagggggaacgacagcgggacgccactccccacctctgatcacggcgacaattcg
ctgggctacacaggttcccgtcttcgacaggaggatttcccgcctcgcatcgtggaacac
ccctcggacttgattgtttccaaaggagaaccagccactctgaactgcaaggcagaggga
aggcccacccccaccatcgagtggtacaagggcggggaaagggtggaaacggacaaggat
gacccgcgctcccaccggatgctgctgcccagcggatctttatttttcctgcgcatcgtg
cacgggcgcaagagccggccggacgaaggggtctatgtgtgtgtggccaggaattacctt
ggggaagccgtgagtcacaatgcatcgctggaggtggcaattctacgggatgacttccga
caaaacccctcagacgtcatggtagctgtgggggaacctgcagtgatggagtgccagccc
cctagaggtcacccagagccaactatatcatggaagaaagatgggacccctctggatgac
aaagatgagagaattacaatcagaggaggaaagctcatgatcacatacacaagaaagaat
gatgctgggaaatacgtttgtgttggaacaaatatggttggagaacgtgaaagtgaagtt
gcagagctcactgttctagagagaccatcttttgtgaagagacccagcaatttggcagtg
actgtggatgacagcgcagagtttaagtgcgaggcaagaggtgacccagtccctacagtg
agatggaggaaagatgacggagagctgccaaaagcaagatatgaaatccgtgatgatcat
accttgaaaatcaggaaagttatggcaggagacatgggatcatacacttgtgttgcagaa
aatatggttggaaaagctgaggcatcagcaactttaacagttcaagagcccccccagttt
gttgtaaagcctcgagaccaggtggctgcactggggcggacagtgactttccagtgtgaa
gcaacggggaaccctcagccagccatcttctggaggagagaagggagccagaatctgctt
ttctcataccagccccctcagtcatccagcagattttcagtttcccagacaggagacctc
accatcaccaatgtgcagagatctgatgtggggtactacatctgccagactttaaatgtt
gcaggaagtatcataacaaaagcctacttggaagttacagatgtgattgcggaccggccg
ccccctgtcattcggcagggtcctgtgaaccagactgtagctgtggatggcactctggta
ctcaactgtgtggccacaggcactttaatgcccactatcctctggaaaaaggatggcatc
ctcatttccacccaagactctcgcatcaagcagctggagacaggagcactgcagatcaga
tatgccaagctgggcgacaccggccgctacacctgcattgcctcaaccccgagtggtgaa
gccacgtggagcgccttcatagaggtccaagagtttggagtcccagtgcagccaccaaga
cccactgacccaaacttgattcctagtgctccatcaaagcctgaggttacagatgtcagc
agaaatacagtaacattgtcatggcaacctaatttgaattcaggtgcaacaccaacctct
tacataattgaggccttcagccatgcatcagggagcagctggcaaactgtagctgaaaat
gtgaaaactgagagttttgcagttaaagggctaaaacctaatgcaatttatctcttcctt
gtgagagcagctaatgcatatgggctgagcgacccgagccaaatatctgatccagtgaaa
actcaagatgttccaccaacaagtcaaggtgtggatcacaagcaggtccagagagagctg
ggtgacgtggtgctacacctgcacaaccctaccatcctttcttcctcctcaatcgaagtt
cattggactgtggaccagcaatcccagtatattcaaggatataaaattctgtaccggccc
acaccagcatcctatggagaatcagagtggttgatctttgaagtgaggactcccaccaaa
aacagcgttatcattccggagctgaagaaaggcgtaaactacgaaatcaaggcccgccct
ttctttaatgagtttcagggagcagatagtgaagtgaaatttgcaaagaccctggaagaa
gctcccagcgccccacctcagagtgtttcagtaactaagaacgatgggaacgggacagca
atcgtggtcacctggcagccaccccctgaggacaaccagaacgggatggttcaggaatac
aaggtttggtgccttggcaacgagagccgataccacatcaacaagaccgtggacggcacc
accttctccgtggtcatcccctccctcgtgcccggcatccgatacagcgtggaggtggct
gccagcactggggcaggacctggggtgaaaagtgatccccagtttatccagctagattct
catggaaaccctgtgtcttcagaagatcaagtcagtttagcccagcagatttctgatgta
gtaaagcagcctgcctttattgctggaattggtgcagcctgttggattatcctcatggtg
ttcagcatctggttgtatcgccacaggaagaagaggaatggactcacgagtacctacgct
ggtatcagaaaagtcccgtcttttaccttcacaccaacagtaacatatcagagaggagga
gaggccgtaagcagtggaggcaggcctggactcctaaacatcagtgaaccagccactcag
ccatggttagcagatacttggcctaacacagggaacaatcacaatgactgctccatcaac
tgctgcacctctggcaatggcaacagtgatagcaacctcacaacgtacagtcgaccagcc
gattgtatagcaaattacaacaatcagctggacaacaagcagacaaacctgatgttgcct
gagccaactgtgtatggggacgtggacctcagcaacaaaatcaatgagatgaaaaccttc
aatagtcccaatctaaaggatggaagatttgtcagccagcctgggcagcccactccttat
gccaccactcagctcatccagtccagtatcagcaataatgttaacagtggcagcggggac
accaatgagaaacactggaaaccctctgttcagcaaaagcaagaggctccacccatacag
tacaacattatggagcaaaacaaattaaacaaagattaccgagtaaatgacaacattgct
ccaactattccctacaaccagtcttatgaccagaatacaggtggatcctacaacagctca
gacagaggcagcagtacatctgggagtcaagggcacaagaagggtgctcggaccccaaag
gctcccaagcaagctggcatgaactgggcagatcttctcccaccccctccagcacaccca
cctccccacagcaacagcgaggattacagtctttcggtggatgaaggctatgaccaagaa
attccttgtcctgtgccacctgcaaggatgtatctgcagcaggatgagctagaggaagag
gaagaagatgagcgaggtcctactccacctgtccgaggagcagcttcctctccagccgct
gtctcctatagccatcagtcaactgccaccctcaccccctctccccaggaagaactccag
cccatgttacaggactgtcaggaggatctgggacacacacaacaccaacctgaccggaga
cgtcaacctgtgagtcctccaccccctccaaggcccatctccccaccacacacctacgga
tacatctcagggcccttggtctctgacatggataccgacgccccagaagaggaggaggac
gaggcggatatcgaggttgccaagatgcagaacaggaggctccttttgcgtggcctggag
cagacccctgcctccagcgttggggatctggagagctccgtgacaggctccatgatcaat
ggctggggctcggcctctgaggaggacaacatctccagcgggcgctccagcgtcagctcc
tccgacggatccttcttcaccgacgccgactttgcacaggccgtggcagcagccgccgag
tacgccgggctcaaagtggccaggaggcaaatgcacgaggcagcaggaggccgtagacat
tttcatgcatcgcactgtcccagacccaccagccctgtatctaccgacagcaacatgagt
gctgttgtaatacagaaggtccgacctgccaaaaagcaaaaacaccagccaggacatctg
cgcagagaagtctacacagatgacctgccccctcctcccgtgccccctccggccatcaag
tccccgacggcgcagtccaaggcgcagctggaggtgcggccggtgctgctgcccaagctg
gcctccgcggacggcaggacggacagatcggcggacaggaagggagccagctacaagggc
agggacggggcggagggcaggcagcaccccgacctgcggacgggctcggcggagcgccgg
gagcccctggagccgccgggagacggcaaaccgcgagccagcaaagcaccaaagcgggac
ggcgcaccagcaaaaagtcatcttctccaagaggacatcctgccatattctagaccaacg
tttccaacatcaaataatcctagagatcccagctcctccagctccatgtcgtcaagaggg
tcaggaggcagacagagggcagatcaagcaaatctagcccgaaggaatgttgcagaaatg
caagtactgggagcctatgaacaaggagaagaggaagaagaagaagagatggaggaaaca
gaaagctga
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integrated database retrieval system
