Marivita sp. tig00000067: ACMVPR_03110
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Entry
ACMVPR_03110 CDS
T11113
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
matg Marivita sp. tig00000067
Brite
KEGG Orthology (KO) [BR:
matg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
matg01002
]
ACMVPR_03110
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
matg01011
]
ACMVPR_03110
Peptidases and inhibitors [BR:
matg01002
]
Cysteine peptidases
Family C82
ACMVPR_03110
Peptidoglycan biosynthesis and degradation proteins [BR:
matg01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ACMVPR_03110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
XOY46773
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Position
625990..627600
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AA seq
536 aa
AA seq
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MTHRTFLRGAAVIALVAASYLAPQSAGAVQVTAFQQAVAESVSSDDQIAAFYRDRGFEPI
WTGGTEADLERRTALLEALSMAHYHGLPSSKYNAEALLSRIASVRSGFDRGSLEVALTDL
YLDFARDLQTGVIDNPRQVSSHIVREIPRRETSYYLEGLLSETPRAFLASLAPQSQEYAR
LMKAKMRLEHSISHGGWGTTVPSGKYEPGDTGAGVVALRDRLIAMGYLDRTVTARYDTSI
TEAVRAFQESHGFTVDGVAGGATLEEINAAPQDRLKSVIVAMERERWINLPGGLGQRHIL
VNLTDFNARIFDDGKLTFETRSVVGHQDDDRQTPEFSDEMDHMVINPSWYVPRSIIVGEY
LPKLRSNSGAVSHLEIIDSRGRVVSRGQSFAGYTERSFPFSMRQKPGPKNALGTVKFMFP
NKYNIYLHDTPAKNLFSREVRTYSHGCVRLNDPHDFAYALLARQTDDPVGFFQSRLRTGS
ETRVNLDQPVPVHLIYRTAFTTAKGDTQYRRDVYGRDATIWNALSAAGVEIAGIRS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgacccaccggacgttcttgcgcggcgcagctgtgattgctctcgtggcagcaagctat
ctggcaccgcaaagcgccggtgctgtccaggtgacagcgttccagcaggcggtggccgaa
agcgtgtccagcgacgaccagatcgccgctttctatcgcgaccgcgggttcgagccgatc
tggaccggcggcacggaggccgatctcgaacgccggactgccctgctcgaagcgctgagc
atggcgcattaccacggtttgccttcttcgaaatacaacgccgaagcgcttctgtcgcgc
atagcctcggtacggagcggcttcgaccgaggatcgctcgaagtggcgctgacggatctg
taccttgattttgcacgcgaccttcagacaggcgtgatcgacaacccccgtcaggtgagc
agccacatcgtacgcgaaattccaaggcgcgagaccagctattatctggaaggtttgttg
tccgagacgccgcgcgcgtttctcgcatcgcttgcaccgcagtcgcaggaatatgcgcgg
ctgatgaaggccaagatgcggttggaacacagcatttcgcatggtggctggggtacgacg
gtgccgtccggcaaatacgaaccaggtgacacgggcgcgggcgtcgtggctctgcgcgac
aggctgatcgccatgggatacctcgaccgtaccgtgaccgcccggtatgacacgtcgatc
acggaagccgtgcgcgccttccaggaaagccatgggtttaccgttgatggtgtcgcgggg
ggcgcaacgctcgaagagatcaacgccgcaccgcaggatcggctgaaatcggtgatcgtc
gcaatggagcgcgaacgctggatcaatctgcccggtgggctggggcagcggcatatcctt
gtcaacctgacggatttcaacgcgcgcatcttcgatgacggcaaactgaccttcgagacc
cggtcggtcgtggggcatcaggatgacgaccgccagacgcccgaattctcggacgaaatg
gatcacatggtcatcaacccaagctggtatgtgccacgctccatcatcgtcggggaatac
ctgccgaagctgcgcagcaactccggcgccgtgtcacatctcgagatcatcgacagccgg
ggccgcgttgtcagccgggggcaaagctttgccggctataccgaacgcagcttcccgttt
tccatgcggcagaagcctgggcccaagaacgcgctgggcacggtcaagttcatgttcccc
aacaaatacaatatctatctgcatgatacgcccgcgaaaaacctgttctcgcgcgaggtt
cgcacctacagccacggctgtgtccgtctgaacgatccgcatgattttgcctatgcgctt
ctggcgcgtcagaccgatgacccggttgggtttttccagtctcgtctgcgcacaggttcg
gaaacgcgggtcaatcttgatcaacctgtcccggtccacctgatctaccgcaccgccttc
acgaccgcgaaaggcgacacgcagtatcgtcgcgacgtttatggacgcgatgccaccatc
tggaacgccctcagcgcggcaggggtggagatcgccggaattcgcagctaa
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